Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487827

Identifier: 103487827

GI number: 103487827

Start: 2472523

End: 2472744

Strand: Reverse

Name: 103487827

Synonym: Sala_2346

Alternate gene names: NA

Gene position: 2472744-2472523 (Counterclockwise)

Preceding gene: 103487828

Following gene: 103487826

Centisome position: 73.92

GC content: 63.06

Gene sequence:

>222_bases
ATGCCTTATGTCAACATCCGCATCACGCGCGAGGGCGCGACGGCCGCGCAGAAGGCCGAACTGATCGCCGGAGTGACCGA
CCTGCTCCAGGAGGTGCTGGCCAAGAACCCCGCGACAACCGTCGTCAATATCGACGAGGTCGATCTGGACAATTGGGGGG
TGGGCGGCCTGCCCGTCGCCGCATATCGTGCGCGGCAAAAATCGAAGGAGCCCGAAACATGA

Upstream 100 bases:

>100_bases
GCCGATCGCCTGCTGCTCTGGCCGCGCGATGGGCGCGGCGACCGCCGCCCCGACGACCATCCGGGGCTGGAAGACCTGGG
ACTCTGACCGGAGAAAGACC

Downstream 100 bases:

>100_bases
CAGCGAACCACGCCGCCCCCGCCTTCGCCGCGATCATGTTGCTCACCGGGGTCGGCATCCCGATCCTCGCGGCGCTGAAC
GGGGGGCTTGGCGCGCGGCT

Product: 4-oxalocrotonate tautomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MPYVNIRITREGATAAQKAELIAGVTDLLQEVLAKNPATTVVNIDEVDLDNWGVGGLPVAAYRARQKSKEPET

Sequences:

>Translated_73_residues
MPYVNIRITREGATAAQKAELIAGVTDLLQEVLAKNPATTVVNIDEVDLDNWGVGGLPVAAYRARQKSKEPET
>Mature_72_residues
PYVNIRITREGATAAQKAELIAGVTDLLQEVLAKNPATTVVNIDEVDLDNWGVGGLPVAAYRARQKSKEPET

Specific function: Unknown

COG id: COG1942

COG function: function code R; Uncharacterized protein, 4-oxalocrotonate tautomerase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-oxalocrotonate tautomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004370
- InterPro:   IPR018191
- InterPro:   IPR014347 [H]

Pfam domain/function: PF01361 Tautomerase [H]

EC number: NA

Molecular weight: Translated: 7878; Mature: 7747

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYVNIRITREGATAAQKAELIAGVTDLLQEVLAKNPATTVVNIDEVDLDNWGVGGLPVA
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHH
AYRARQKSKEPET
HHHHHHCCCCCCC
>Mature Secondary Structure 
PYVNIRITREGATAAQKAELIAGVTDLLQEVLAKNPATTVVNIDEVDLDNWGVGGLPVA
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHH
AYRARQKSKEPET
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8157608 [H]