| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487803
Identifier: 103487803
GI number: 103487803
Start: 2450759
End: 2451346
Strand: Direct
Name: 103487803
Synonym: Sala_2322
Alternate gene names: NA
Gene position: 2450759-2451346 (Clockwise)
Preceding gene: 103487802
Following gene: 103487804
Centisome position: 73.26
GC content: 66.33
Gene sequence:
>588_bases ATGATGGAGAAACAATTCTTGGCTGCCACCGACATTCCCCCACCCCCCGCCGACTGGGCGCAGCGACTGCTCGCCTTCTG GTTCGACCGTCATACGATGGACGACTGGTACGGCGGCGGCCCCGATTTCGACGCCGAGGTTCGCGACCTCGCCGAACACT GGCACCAGGCGCTTCGCTCGCAGCCCGCCGACGCCTTCCTCACCGATCCCGACACCGCACTCGCTGCGGCGATCCTGTTC GACCAGGTTCCGCGCAACATCTACCGCGGCCACGCCGACGCCTTTGCCACCGACAGCCTCGCCCGCGCGATCGCGCGCGG CATCGTGACGCGCGGCTGGCACCAGAATTGGCCCGACGAGCGCCGCAAGTTCGCCTGCCTGCCCTTTCAGCACAGCGAAG ACATCGACGACCAGCGCGAATCGCTGCGCCTTTTCGCCGCGTTCGACGACCCGATGTTCCGGGATTATGCGCAGAAGCAT TTCGACATCGTCGACCGCTTTGGCCGCTTTCCGCACCGCAACGAGGCGCTCGGCCGCGCGACCCGGCCGGAGGAAGAGGC AGCGATAGAAGAGGGCAGGAATTGGTGA
Upstream 100 bases:
>100_bases CCAAGCCTCCTCAACTAAGCTCGTCATCCCGGCGCAGGCCGGGATCTCACCGTCGCGGTTTGACGTGATGGCGAGATCCC GGCCTGCGCCGGGATGACGC
Downstream 100 bases:
>100_bases TAGGCAGGCCGCGACTGGGAGACGCGCCATGGCCGAATTCACCGACACGCTGACCGACAAACATATCGCCTTCATCGAAA AGCAGCCGGTCTTCTTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MMEKQFLAATDIPPPPADWAQRLLAFWFDRHTMDDWYGGGPDFDAEVRDLAEHWHQALRSQPADAFLTDPDTALAAAILF DQVPRNIYRGHADAFATDSLARAIARGIVTRGWHQNWPDERRKFACLPFQHSEDIDDQRESLRLFAAFDDPMFRDYAQKH FDIVDRFGRFPHRNEALGRATRPEEEAAIEEGRNW
Sequences:
>Translated_195_residues MMEKQFLAATDIPPPPADWAQRLLAFWFDRHTMDDWYGGGPDFDAEVRDLAEHWHQALRSQPADAFLTDPDTALAAAILF DQVPRNIYRGHADAFATDSLARAIARGIVTRGWHQNWPDERRKFACLPFQHSEDIDDQRESLRLFAAFDDPMFRDYAQKH FDIVDRFGRFPHRNEALGRATRPEEEAAIEEGRNW >Mature_195_residues MMEKQFLAATDIPPPPADWAQRLLAFWFDRHTMDDWYGGGPDFDAEVRDLAEHWHQALRSQPADAFLTDPDTALAAAILF DQVPRNIYRGHADAFATDSLARAIARGIVTRGWHQNWPDERRKFACLPFQHSEDIDDQRESLRLFAAFDDPMFRDYAQKH FDIVDRFGRFPHRNEALGRATRPEEEAAIEEGRNW
Specific function: Unknown
COG id: COG3803
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22653; Mature: 22653
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEKQFLAATDIPPPPADWAQRLLAFWFDRHTMDDWYGGGPDFDAEVRDLAEHWHQALRS CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHC QPADAFLTDPDTALAAAILFDQVPRNIYRGHADAFATDSLARAIARGIVTRGWHQNWPDE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RRKFACLPFQHSEDIDDQRESLRLFAAFDDPMFRDYAQKHFDIVDRFGRFPHRNEALGRA HHCEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC TRPEEEAAIEEGRNW CCCHHHHHHHCCCCC >Mature Secondary Structure MMEKQFLAATDIPPPPADWAQRLLAFWFDRHTMDDWYGGGPDFDAEVRDLAEHWHQALRS CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHC QPADAFLTDPDTALAAAILFDQVPRNIYRGHADAFATDSLARAIARGIVTRGWHQNWPDE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RRKFACLPFQHSEDIDDQRESLRLFAAFDDPMFRDYAQKHFDIVDRFGRFPHRNEALGRA HHCEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC TRPEEEAAIEEGRNW CCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA