Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487804

Identifier: 103487804

GI number: 103487804

Start: 2451375

End: 2451941

Strand: Direct

Name: 103487804

Synonym: Sala_2323

Alternate gene names: NA

Gene position: 2451375-2451941 (Clockwise)

Preceding gene: 103487803

Following gene: 103487805

Centisome position: 73.28

GC content: 63.67

Gene sequence:

>567_bases
ATGGCCGAATTCACCGACACGCTGACCGACAAACATATCGCCTTCATCGAAAAGCAGCCGGTCTTCTTCACCGCGACCGC
CGCGCGCGACGGCCGCATCAACCTGTCGCCCAAGGGTTATGCCGACAGTTTCAGGATATTGTCCGAACGGCAGGTCGCCT
ATCTCGACCTCGGCGGGTCGGGCAACGAAACCCACGCACATCTGGCCGCGGACGGCCGAATCACCATCATGTTCTGCGCC
TTCGACCGCAGTGCGCTGATCCTGCGCATTTACGGCCACGGCCACCCCGTGCTGCCGCAGGATGCCGAGTGGGACGCACT
CGCGGCGCATTTCACCCTGCTCCCCGGTACGCGCCAGATTTTCGTGATCGACGTCGACAGCGTGCAGACGAGCTGCGGCT
GGGGCGTACCGATGATGGAATTGCAAGGCGAGCGCGAGACGCTGCAGAAATATCACCGGCAGGCCGATCCCGCGCTGTGG
GTCGAGAAGTTTCAGGAGCGCACGAAAAGCATCGACGGCCTGCCGACGCGCCCGACCGACCGCTTCATCGCCGGGGAAAC
CGCCTGA

Upstream 100 bases:

>100_bases
CGCAACGAGGCGCTCGGCCGCGCGACCCGGCCGGAGGAAGAGGCAGCGATAGAAGAGGGCAGGAATTGGTGATAGGCAGG
CCGCGACTGGGAGACGCGCC

Downstream 100 bases:

>100_bases
TGCCGCTGGTCGAGCTGGTGCGCCTGCCCAACGGCGCCGAGGCCGAACTGCTGCGCGGCCGCCTCGAAAGCGCGGGCGTC
CACGCCGTGTGCTTCGACGC

Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Products: NA

Alternate protein names: Pyridoxamine 5-Phosphate Oxidase Family Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Signal Transduction Histidine Kinase; Pyridoxamine-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase Family

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MAEFTDTLTDKHIAFIEKQPVFFTATAARDGRINLSPKGYADSFRILSERQVAYLDLGGSGNETHAHLAADGRITIMFCA
FDRSALILRIYGHGHPVLPQDAEWDALAAHFTLLPGTRQIFVIDVDSVQTSCGWGVPMMELQGERETLQKYHRQADPALW
VEKFQERTKSIDGLPTRPTDRFIAGETA

Sequences:

>Translated_188_residues
MAEFTDTLTDKHIAFIEKQPVFFTATAARDGRINLSPKGYADSFRILSERQVAYLDLGGSGNETHAHLAADGRITIMFCA
FDRSALILRIYGHGHPVLPQDAEWDALAAHFTLLPGTRQIFVIDVDSVQTSCGWGVPMMELQGERETLQKYHRQADPALW
VEKFQERTKSIDGLPTRPTDRFIAGETA
>Mature_187_residues
AEFTDTLTDKHIAFIEKQPVFFTATAARDGRINLSPKGYADSFRILSERQVAYLDLGGSGNETHAHLAADGRITIMFCAF
DRSALILRIYGHGHPVLPQDAEWDALAAHFTLLPGTRQIFVIDVDSVQTSCGWGVPMMELQGERETLQKYHRQADPALWV
EKFQERTKSIDGLPTRPTDRFIAGETA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21021; Mature: 20890

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEFTDTLTDKHIAFIEKQPVFFTATAARDGRINLSPKGYADSFRILSERQVAYLDLGGS
CCCCCCHHCCCEEEEEECCCEEEEEECCCCCEEECCCCCCCCHHHHHCCCEEEEEEECCC
GNETHAHLAADGRITIMFCAFDRSALILRIYGHGHPVLPQDAEWDALAAHFTLLPGTRQI
CCCCEEEEEECCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEE
FVIDVDSVQTSCGWGVPMMELQGERETLQKYHRQADPALWVEKFQERTKSIDGLPTRPTD
EEEEECCCCCCCCCCCCHHEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
RFIAGETA
CEECCCCC
>Mature Secondary Structure 
AEFTDTLTDKHIAFIEKQPVFFTATAARDGRINLSPKGYADSFRILSERQVAYLDLGGS
CCCCCHHCCCEEEEEECCCEEEEEECCCCCEEECCCCCCCCHHHHHCCCEEEEEEECCC
GNETHAHLAADGRITIMFCAFDRSALILRIYGHGHPVLPQDAEWDALAAHFTLLPGTRQI
CCCCEEEEEECCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEE
FVIDVDSVQTSCGWGVPMMELQGERETLQKYHRQADPALWVEKFQERTKSIDGLPTRPTD
EEEEECCCCCCCCCCCCHHEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
RFIAGETA
CEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA