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The map label for this gene is yngJ [H]

Identifier: 103487794

GI number: 103487794

Start: 2441066

End: 2442241

Strand: Direct

Name: yngJ [H]

Synonym: Sala_2313

Alternate gene names: 103487794

Gene position: 2441066-2442241 (Clockwise)

Preceding gene: 103487792

Following gene: 103487795

Centisome position: 72.97

GC content: 66.16

Gene sequence:

>1176_bases
ATGACAGCTTTCGACGACTGGCGCGCCCGTTCGCCCTATTATGGCGAAACCCATGAGGCGCTGGCCGCGAGCGTCCGCCG
CTTCGTCGAACGCGAGATCGCGCCCAACATCGACCGCTGGGAAGCCGAAGGCGAACTGCCGCGCGAACTGCACAAAAAGG
CCGCCGAAGCGGGCATCCTTGGCCTGCGCTATCCCGAGCAATATGGCGGGCACAGCAAGGGTTTCGACATTTTCCACGGG
CTTGTCGTCACCGAAGAGCTGGCCGCGGTTGGCGCAGGGGGGCTTGGCGCGTCGCTGATGACGCACGGCATCGGCCTGCC
GCCGATCCTTGCGCTGGGGTCCGATCATTTGAAACAGCGCGTCGCCCCGCCGGTGCTCGCGGGCGAGAAGATCATCGCGC
TCGGCATCACCGAAGCGAGCGGCGGCAGCGACGTCGCGAACCTCAGGACGACAGCGGTCAGGGACGGCGACAGCTATATC
GTCAATGGCGACAAGATGTTCATCACCAGCGGCATGCGCGCCGACTGGCTGACCTGCGCGGTGCGCACCGGCGGGCCGGG
TGCGGGCGGCATCTCGCTGCTGCTGATCGACATGGACTCGCCCGGCGTCGAACGGACAAGACTCGACAAGATGGGCTGGC
GGTGCAGCGACACCGCCGCGATCCATTTCAGCGACGTCCGCGTCCCCGTCGAAAATCTGATCGGGCCGGAGAATGGCGGC
TTCATCGGCATCATGCGCAATTTCAACGGCGAACGGCTCGGCATGGCGATGGGCTGCTGCGCCTATGCCCGCGTCGCGAT
GGCCGAAGCCGCCGAGTGGGCGCAGCATCGCGAAACCTTTGGGCGTCCGCTCGTCGGCCACCAGTCGATCCGCATCAAGC
TCGCCGACATGGAACGCCAGATCGAGGCGACGCAGGCGTGGGTCGATTTGTGCGCGTGGCAGGTGAAGGAGGGCAAGGAC
CGTCCTGCCGATTTCGCGATGCTCAAGGTGCAGGCAACGCGAATGCTGGAGGCCGTCGCGCGCGAAGCGGCGCAGGTGCT
GGGAGGCGCGTCCTACATCACCGGCAGCAAGGTCGAGCGCATCTACCGCGAGGTCCGCGTCAATGCGATCGGCGGCGGCA
GCGAGGAAATCATGCTCGACCTCGCGGGGCGGCAGTTGTTTGGTGGCAAGCGTTAG

Upstream 100 bases:

>100_bases
TTCATGGCGCGCGACCCTAACCGCTTGATCGCGCAGCGCAAGCGCGCGGGCGAAAGAAAGGCACCTTGACGTTTACGTCA
ACCCCGCGCAGCATCGGTGC

Downstream 100 bases:

>100_bases
AATAGGCGAGCCTGCGGCCTCTCGACACAGACGGGCCTTCGCGGCACATTCGCCGCATGGACAATTCATCGCATAGCTGG
CCCGCCGAGGCCGAAACCCT

Product: acyl-CoA dehydrogenase-like protein

Products: 2,3-dehydroacyl-CoA; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTAFDDWRARSPYYGETHEALAASVRRFVEREIAPNIDRWEAEGELPRELHKKAAEAGILGLRYPEQYGGHSKGFDIFHG
LVVTEELAAVGAGGLGASLMTHGIGLPPILALGSDHLKQRVAPPVLAGEKIIALGITEASGGSDVANLRTTAVRDGDSYI
VNGDKMFITSGMRADWLTCAVRTGGPGAGGISLLLIDMDSPGVERTRLDKMGWRCSDTAAIHFSDVRVPVENLIGPENGG
FIGIMRNFNGERLGMAMGCCAYARVAMAEAAEWAQHRETFGRPLVGHQSIRIKLADMERQIEATQAWVDLCAWQVKEGKD
RPADFAMLKVQATRMLEAVAREAAQVLGGASYITGSKVERIYREVRVNAIGGGSEEIMLDLAGRQLFGGKR

Sequences:

>Translated_391_residues
MTAFDDWRARSPYYGETHEALAASVRRFVEREIAPNIDRWEAEGELPRELHKKAAEAGILGLRYPEQYGGHSKGFDIFHG
LVVTEELAAVGAGGLGASLMTHGIGLPPILALGSDHLKQRVAPPVLAGEKIIALGITEASGGSDVANLRTTAVRDGDSYI
VNGDKMFITSGMRADWLTCAVRTGGPGAGGISLLLIDMDSPGVERTRLDKMGWRCSDTAAIHFSDVRVPVENLIGPENGG
FIGIMRNFNGERLGMAMGCCAYARVAMAEAAEWAQHRETFGRPLVGHQSIRIKLADMERQIEATQAWVDLCAWQVKEGKD
RPADFAMLKVQATRMLEAVAREAAQVLGGASYITGSKVERIYREVRVNAIGGGSEEIMLDLAGRQLFGGKR
>Mature_390_residues
TAFDDWRARSPYYGETHEALAASVRRFVEREIAPNIDRWEAEGELPRELHKKAAEAGILGLRYPEQYGGHSKGFDIFHGL
VVTEELAAVGAGGLGASLMTHGIGLPPILALGSDHLKQRVAPPVLAGEKIIALGITEASGGSDVANLRTTAVRDGDSYIV
NGDKMFITSGMRADWLTCAVRTGGPGAGGISLLLIDMDSPGVERTRLDKMGWRCSDTAAIHFSDVRVPVENLIGPENGGF
IGIMRNFNGERLGMAMGCCAYARVAMAEAAEWAQHRETFGRPLVGHQSIRIKLADMERQIEATQAWVDLCAWQVKEGKDR
PADFAMLKVQATRMLEAVAREAAQVLGGASYITGSKVERIYREVRVNAIGGGSEEIMLDLAGRQLFGGKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=382, Percent_Identity=33.5078534031414, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI4557231, Length=377, Percent_Identity=32.0954907161804, Blast_Score=201, Evalue=7e-52,
Organism=Homo sapiens, GI187960098, Length=377, Percent_Identity=32.0954907161804, Blast_Score=201, Evalue=8e-52,
Organism=Homo sapiens, GI7656849, Length=362, Percent_Identity=33.1491712707182, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI4557233, Length=393, Percent_Identity=32.824427480916, Blast_Score=179, Evalue=6e-45,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=29.6, Blast_Score=168, Evalue=9e-42,
Organism=Homo sapiens, GI226958414, Length=344, Percent_Identity=30.5232558139535, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI21361497, Length=375, Percent_Identity=29.8666666666667, Blast_Score=145, Evalue=5e-35,
Organism=Homo sapiens, GI4501859, Length=368, Percent_Identity=26.0869565217391, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4557235, Length=334, Percent_Identity=30.5389221556886, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI76496475, Length=334, Percent_Identity=30.5389221556886, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI7669494, Length=330, Percent_Identity=28.1818181818182, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI4503943, Length=330, Percent_Identity=28.1818181818182, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI38505218, Length=287, Percent_Identity=27.5261324041812, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI48976061, Length=280, Percent_Identity=26.4285714285714, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI211971008, Length=280, Percent_Identity=26.4285714285714, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI87081958, Length=378, Percent_Identity=31.2169312169312, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI1786223, Length=388, Percent_Identity=28.0927835051546, Blast_Score=144, Evalue=9e-36,
Organism=Escherichia coli, GI87082384, Length=282, Percent_Identity=31.2056737588652, Blast_Score=89, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17505929, Length=372, Percent_Identity=35.2150537634409, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17551932, Length=374, Percent_Identity=33.6898395721925, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17534899, Length=386, Percent_Identity=30.8290155440415, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17570075, Length=372, Percent_Identity=30.9139784946237, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17569725, Length=379, Percent_Identity=30.0791556728232, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17538396, Length=372, Percent_Identity=29.8387096774194, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17533517, Length=373, Percent_Identity=30.2949061662198, Blast_Score=171, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI17508101, Length=371, Percent_Identity=27.7628032345013, Blast_Score=160, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI71985184, Length=353, Percent_Identity=29.1784702549575, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17506239, Length=371, Percent_Identity=25.0673854447439, Blast_Score=134, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI71990804, Length=281, Percent_Identity=28.8256227758007, Blast_Score=121, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI71985192, Length=306, Percent_Identity=29.4117647058824, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17534353, Length=390, Percent_Identity=25.1282051282051, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71982178, Length=275, Percent_Identity=25.0909090909091, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI32563615, Length=233, Percent_Identity=27.8969957081545, Blast_Score=98, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17562446, Length=288, Percent_Identity=25.6944444444444, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17531909, Length=241, Percent_Identity=24.896265560166, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24660351, Length=377, Percent_Identity=31.5649867374005, Blast_Score=195, Evalue=4e-50,
Organism=Drosophila melanogaster, GI21356377, Length=375, Percent_Identity=29.6, Blast_Score=168, Evalue=6e-42,
Organism=Drosophila melanogaster, GI21355753, Length=379, Percent_Identity=30.3430079155673, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24646207, Length=364, Percent_Identity=29.9450549450549, Blast_Score=152, Evalue=5e-37,
Organism=Drosophila melanogaster, GI281363737, Length=334, Percent_Identity=30.5389221556886, Blast_Score=145, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24666513, Length=375, Percent_Identity=25.3333333333333, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI19920834, Length=343, Percent_Identity=29.4460641399417, Blast_Score=104, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.3

Molecular weight: Translated: 42290; Mature: 42159

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFDDWRARSPYYGETHEALAASVRRFVEREIAPNIDRWEAEGELPRELHKKAAEAGIL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEE
GLRYPEQYGGHSKGFDIFHGLVVTEELAAVGAGGLGASLMTHGIGLPPILALGSDHLKQR
ECCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHCCCHHHHHH
VAPPVLAGEKIIALGITEASGGSDVANLRTTAVRDGDSYIVNGDKMFITSGMRADWLTCA
CCCCCCCCCEEEEEEEEECCCCCCHHHHHHEEEECCCCEEECCCEEEEECCCCCCEEEEE
VRTGGPGAGGISLLLIDMDSPGVERTRLDKMGWRCSDTAAIHFSDVRVPVENLIGPENGG
EECCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCHHHCCCCCCCC
FIGIMRNFNGERLGMAMGCCAYARVAMAEAAEWAQHRETFGRPLVGHQSIRIKLADMERQ
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHH
IEATQAWVDLCAWQVKEGKDRPADFAMLKVQATRMLEAVAREAAQVLGGASYITGSKVER
HHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHH
IYREVRVNAIGGGSEEIMLDLAGRQLFGGKR
HHHHHEEEEECCCCCEEEEEECCCHHCCCCC
>Mature Secondary Structure 
TAFDDWRARSPYYGETHEALAASVRRFVEREIAPNIDRWEAEGELPRELHKKAAEAGIL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEE
GLRYPEQYGGHSKGFDIFHGLVVTEELAAVGAGGLGASLMTHGIGLPPILALGSDHLKQR
ECCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHCCCHHHHHH
VAPPVLAGEKIIALGITEASGGSDVANLRTTAVRDGDSYIVNGDKMFITSGMRADWLTCA
CCCCCCCCCEEEEEEEEECCCCCCHHHHHHEEEECCCCEEECCCEEEEECCCCCCEEEEE
VRTGGPGAGGISLLLIDMDSPGVERTRLDKMGWRCSDTAAIHFSDVRVPVENLIGPENGG
EECCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCHHHCCCCCCCC
FIGIMRNFNGERLGMAMGCCAYARVAMAEAAEWAQHRETFGRPLVGHQSIRIKLADMERQ
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHH
IEATQAWVDLCAWQVKEGKDRPADFAMLKVQATRMLEAVAREAAQVLGGASYITGSKVER
HHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHH
IYREVRVNAIGGGSEEIMLDLAGRQLFGGKR
HHHHHEEEEECCCCCEEEEEECCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acceptor

Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]