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The map label for this gene is cpsA1 [H]

Identifier: 103487795

GI number: 103487795

Start: 2442298

End: 2443506

Strand: Direct

Name: cpsA1 [H]

Synonym: Sala_2314

Alternate gene names: 103487795

Gene position: 2442298-2443506 (Clockwise)

Preceding gene: 103487794

Following gene: 103487798

Centisome position: 73.01

GC content: 67.74

Gene sequence:

>1209_bases
ATGGACAATTCATCGCATAGCTGGCCCGCCGAGGCCGAAACCCTCCTCGACGACCTTGTCGACCTGCGCCGCGCGATTCA
TCGCGAGCCGGAGCTGGGCCTCCAGAACCCCAGGACGCTCGCCAAGATCAAGGACGCGCTCGCAGGGTTGCCGCTCGAGT
TTCGCGAGGGGCCCTCGACGACCGGGCTGGTCGCGATCCTGCGCGGGCCCGCGAACGGGCGCACCGTGCTGCTGCGCGGC
GACATGGATGCGCTGCCGCTCGTCGAGGACACCGGGCTCGATTTCGCGTCCGAAACGACCGGCGCGATGCATGCGTGCGG
GCACGACACGCATGTCGCGATGCTGGTCGGCGCGGCGAAGCTGCTCTGCGCGGCGCGCGACCGCTTGCCCGGCACCGTCC
TGTTCATGTTCCAGCCGGGCGAAGAAGGCCATCATGGCGCGCGCTTCATGCTGGACGACGGGCTGATCGACCCGCTGCCC
GACGCCGCCTTTGCGCTCCACATCATGCCCAACGCGCCGCACGGCATCTTTGCCGGGCGCGCGGGGCCGCTGCTCGCCTC
GTCGGATGTCCTCTCGATTACCGTCAAGGGCGCGGGCGGGCACGCTTCGATGCCGCACGATGCGGTCGATCCGATCCCCG
TCGCCTGCGCGATCGTCACCGCGATCCAGACGATGGTGACGCGACGCATTTCGGTGTTCGATCCCGCGGTTGTCACGATC
GCGAAGATCACTGCCGGGACCACGAACAACATCATCCCCGAGACCGCCGAGATGCTGGGCACGATCCGCACCCTGTCACC
CGAACGCCGCGCCATGGTCGCGCGCGAGCTGAATCGCCTCGCTCCCGCAATCGCCGAAGCGCATGGCTGCACCGCCGAGG
TCCATATCGAGGAAGGTTTCCCCGTCACCATCTGCGACAGCCGCGCCGCCGCCTTCGGTCAGCGCGTCGTCGAGAATGTG
TTCGGCGAAGCGGCGTGGCTGACGATGGACAATCCGGTGATGGGCGCCGAGGATTTCGCCTATGTCCTCGAAAAAGTCCC
CGGCGCGATGTTCTGGCTCGGCGCCAGCCACGCAGGCAGCGACTGGCGCCAATGCTGCGGCCTGCACAGCAACCGCATGG
TGCTGGACGAAAAGGTCATGGCGCGCGGCGCGGCGCTGCACGCAGCGCTGGCAGAACGGTTTTTGAACGAGGGGTTCGGG
CAGGAATAG

Upstream 100 bases:

>100_bases
TGCTCGACCTCGCGGGGCGGCAGTTGTTTGGTGGCAAGCGTTAGAATAGGCGAGCCTGCGGCCTCTCGACACAGACGGGC
CTTCGCGGCACATTCGCCGC

Downstream 100 bases:

>100_bases
TCTCACGCAAAGGCGTTCGTCGCATCGCCAACGACCATCGCGTTTGGGATGTCTTCGTCCTTGCGCCTTCACGCCTTTGC
GTGAGATTTTCTTACCCCAA

Product: peptidase M20D, amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MDNSSHSWPAEAETLLDDLVDLRRAIHREPELGLQNPRTLAKIKDALAGLPLEFREGPSTTGLVAILRGPANGRTVLLRG
DMDALPLVEDTGLDFASETTGAMHACGHDTHVAMLVGAAKLLCAARDRLPGTVLFMFQPGEEGHHGARFMLDDGLIDPLP
DAAFALHIMPNAPHGIFAGRAGPLLASSDVLSITVKGAGGHASMPHDAVDPIPVACAIVTAIQTMVTRRISVFDPAVVTI
AKITAGTTNNIIPETAEMLGTIRTLSPERRAMVARELNRLAPAIAEAHGCTAEVHIEEGFPVTICDSRAAAFGQRVVENV
FGEAAWLTMDNPVMGAEDFAYVLEKVPGAMFWLGASHAGSDWRQCCGLHSNRMVLDEKVMARGAALHAALAERFLNEGFG
QE

Sequences:

>Translated_402_residues
MDNSSHSWPAEAETLLDDLVDLRRAIHREPELGLQNPRTLAKIKDALAGLPLEFREGPSTTGLVAILRGPANGRTVLLRG
DMDALPLVEDTGLDFASETTGAMHACGHDTHVAMLVGAAKLLCAARDRLPGTVLFMFQPGEEGHHGARFMLDDGLIDPLP
DAAFALHIMPNAPHGIFAGRAGPLLASSDVLSITVKGAGGHASMPHDAVDPIPVACAIVTAIQTMVTRRISVFDPAVVTI
AKITAGTTNNIIPETAEMLGTIRTLSPERRAMVARELNRLAPAIAEAHGCTAEVHIEEGFPVTICDSRAAAFGQRVVENV
FGEAAWLTMDNPVMGAEDFAYVLEKVPGAMFWLGASHAGSDWRQCCGLHSNRMVLDEKVMARGAALHAALAERFLNEGFG
QE
>Mature_402_residues
MDNSSHSWPAEAETLLDDLVDLRRAIHREPELGLQNPRTLAKIKDALAGLPLEFREGPSTTGLVAILRGPANGRTVLLRG
DMDALPLVEDTGLDFASETTGAMHACGHDTHVAMLVGAAKLLCAARDRLPGTVLFMFQPGEEGHHGARFMLDDGLIDPLP
DAAFALHIMPNAPHGIFAGRAGPLLASSDVLSITVKGAGGHASMPHDAVDPIPVACAIVTAIQTMVTRRISVFDPAVVTI
AKITAGTTNNIIPETAEMLGTIRTLSPERRAMVARELNRLAPAIAEAHGCTAEVHIEEGFPVTICDSRAAAFGQRVVENV
FGEAAWLTMDNPVMGAEDFAYVLEKVPGAMFWLGASHAGSDWRQCCGLHSNRMVLDEKVMARGAALHAALAERFLNEGFG
QE

Specific function: Can release basic, acidic, aromatic, and, to a lesser extent, aliphatic amino acids [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=365, Percent_Identity=27.1232876712329, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 42801; Mature: 42801

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSSHSWPAEAETLLDDLVDLRRAIHREPELGLQNPRTLAKIKDALAGLPLEFREGPST
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCC
TGLVAILRGPANGRTVLLRGDMDALPLVEDTGLDFASETTGAMHACGHDTHVAMLVGAAK
CCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHH
LLCAARDRLPGTVLFMFQPGEEGHHGARFMLDDGLIDPLPDAAFALHIMPNAPHGIFAGR
HHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCEECCC
AGPLLASSDVLSITVKGAGGHASMPHDAVDPIPVACAIVTAIQTMVTRRISVFDPAVVTI
CCCCEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEE
AKITAGTTNNIIPETAEMLGTIRTLSPERRAMVARELNRLAPAIAEAHGCTAEVHIEEGF
EHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
PVTICDSRAAAFGQRVVENVFGEAAWLTMDNPVMGAEDFAYVLEKVPGAMFWLGASHAGS
CEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCH
DWRQCCGLHSNRMVLDEKVMARGAALHAALAERFLNEGFGQE
HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDNSSHSWPAEAETLLDDLVDLRRAIHREPELGLQNPRTLAKIKDALAGLPLEFREGPST
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCC
TGLVAILRGPANGRTVLLRGDMDALPLVEDTGLDFASETTGAMHACGHDTHVAMLVGAAK
CCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHH
LLCAARDRLPGTVLFMFQPGEEGHHGARFMLDDGLIDPLPDAAFALHIMPNAPHGIFAGR
HHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCEECCC
AGPLLASSDVLSITVKGAGGHASMPHDAVDPIPVACAIVTAIQTMVTRRISVFDPAVVTI
CCCCEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEE
AKITAGTTNNIIPETAEMLGTIRTLSPERRAMVARELNRLAPAIAEAHGCTAEVHIEEGF
EHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
PVTICDSRAAAFGQRVVENVFGEAAWLTMDNPVMGAEDFAYVLEKVPGAMFWLGASHAGS
CEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCH
DWRQCCGLHSNRMVLDEKVMARGAALHAALAERFLNEGFGQE
HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559343; 11427726; 1597179 [H]