| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487789
Identifier: 103487789
GI number: 103487789
Start: 2435781
End: 2436992
Strand: Direct
Name: 103487789
Synonym: Sala_2308
Alternate gene names: NA
Gene position: 2435781-2436992 (Clockwise)
Preceding gene: 103487788
Following gene: 103487790
Centisome position: 72.81
GC content: 60.81
Gene sequence:
>1212_bases ATGAGCGAAGTGACCGCCACGGCGACCGCAACCGACGAGCTGAAGCTGACGCCGCCCGAACCCGTGCCCGCAGTGACGCC TGACAAGGCGGCCGGCCTTGTACCCCTGTCGACCGAACAGAAATCGAAGCTGGAGGAACGCGTCGACGGCTTCATCGACG ATCTGGTTGCACAGGACGTCAATTCGCCAGCATTCGGACAAAAGGTCGACCAGATCACCAATATGGGCCGCAAGGAAATG CTGGAAGCGGCGAACCAGTCGAACCGTTTCCTCGACCGCCCGATCAAGGCGATGGATCGCGACACCGACATCGGCCAGAA TCTGATCGAGCTGCGCAATACGGTCGAACGGCTAGATCCGTCGGCGAATGGCAAGCTGATCAGCAAGCGCGGCCTGCTCG ACAAATTGTTCGGCAGCAGCGTAACCAACTATTTCGCCAAATACCGCAGCGCCCAGTCGCATATATCAAGCATTCTCACC GCGCTTGCGAACGGCAAGGACGAGCTGTTGATGGACAATGCCGCCATCGACGTCGAACGCCGCAAGCTGTGGGAAGCGAT GGGAAAGCTGGAGCAGATGGTCCACATCGCCCAGACGCTCGACCGCAAGCTGGAAGAGAAGGCTGCCGAACTCGACGGTG TCGATCCCGCCAAGGCGAAGGTATTGCGTGAAAATGCGCTGTTTTATGCGCGCCAGCGGACGCAGGACCTGCTGACGCAA ATGGCGGTCACAGTGCAGGGCTATCTCGCGCTCGACCTCGTCAAGAAGAACAATATCGAGCTGGTGAAGGGCGTCGAGCG CGCCAGCACCACCACCGTCGGCGCGCTCAAGACCGCAATCACCGTTGCGCAGGCGATGACCAATCAGAAGCTGGTGCTCG AACAGATCACCGCGCTCAACACCACCACCGCGAACATCATCGACGGCACCTCGAAAATGCTCAAGGACAATACTGCGCGC ATCCACGAACAGGCGGCGTCGAGCACGATCCCGATGGAAACGCTGCAACGCGCCTTTCAGAATATCTATGACACGATGGA CGCGATCGACACCTTCAAGCTGAAGGCGCTCGACAGCATGAAGACCACGGTGACGACGCTGGAGGGCGAGGTCGCCAAGT CGAAGGGCTATATCGCGCGCGCCGAGGGCGCGGCCCAGGCGCAGGCGAGCGTCGGCGGCGCCGAGAGCCCGCTCACCGCA ATCGAGGGATGA
Upstream 100 bases:
>100_bases TGAACAGGGCAAGGTCAGTGTAATGCTTGTATAATACAGTGCCGCATGCCATATAGGCGGGCGGCCCTGGAAACTCTCTT GAGGGCTGGAAGGAAGACGA
Downstream 100 bases:
>100_bases CGGCGACGCGATGAGCATGAGCGAAGTCGACAAGATCCGCCTCTCGGCCGAATCGGCGATCGAACGGTCGCGCGACCGGC GGCGGCCGATCGGCACCAAG
Product: toxic anion resistance
Products: NA
Alternate protein names: Xic Anion Resistance Protein; Xic Anion Resistance; TelA-Like Protein; Protein Involved In Tellurite Resistance; KlaA Protein; Tellurite Resistance Protein
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSEVTATATATDELKLTPPEPVPAVTPDKAAGLVPLSTEQKSKLEERVDGFIDDLVAQDVNSPAFGQKVDQITNMGRKEM LEAANQSNRFLDRPIKAMDRDTDIGQNLIELRNTVERLDPSANGKLISKRGLLDKLFGSSVTNYFAKYRSAQSHISSILT ALANGKDELLMDNAAIDVERRKLWEAMGKLEQMVHIAQTLDRKLEEKAAELDGVDPAKAKVLRENALFYARQRTQDLLTQ MAVTVQGYLALDLVKKNNIELVKGVERASTTTVGALKTAITVAQAMTNQKLVLEQITALNTTTANIIDGTSKMLKDNTAR IHEQAASSTIPMETLQRAFQNIYDTMDAIDTFKLKALDSMKTTVTTLEGEVAKSKGYIARAEGAAQAQASVGGAESPLTA IEG
Sequences:
>Translated_403_residues MSEVTATATATDELKLTPPEPVPAVTPDKAAGLVPLSTEQKSKLEERVDGFIDDLVAQDVNSPAFGQKVDQITNMGRKEM LEAANQSNRFLDRPIKAMDRDTDIGQNLIELRNTVERLDPSANGKLISKRGLLDKLFGSSVTNYFAKYRSAQSHISSILT ALANGKDELLMDNAAIDVERRKLWEAMGKLEQMVHIAQTLDRKLEEKAAELDGVDPAKAKVLRENALFYARQRTQDLLTQ MAVTVQGYLALDLVKKNNIELVKGVERASTTTVGALKTAITVAQAMTNQKLVLEQITALNTTTANIIDGTSKMLKDNTAR IHEQAASSTIPMETLQRAFQNIYDTMDAIDTFKLKALDSMKTTVTTLEGEVAKSKGYIARAEGAAQAQASVGGAESPLTA IEG >Mature_402_residues SEVTATATATDELKLTPPEPVPAVTPDKAAGLVPLSTEQKSKLEERVDGFIDDLVAQDVNSPAFGQKVDQITNMGRKEML EAANQSNRFLDRPIKAMDRDTDIGQNLIELRNTVERLDPSANGKLISKRGLLDKLFGSSVTNYFAKYRSAQSHISSILTA LANGKDELLMDNAAIDVERRKLWEAMGKLEQMVHIAQTLDRKLEEKAAELDGVDPAKAKVLRENALFYARQRTQDLLTQM AVTVQGYLALDLVKKNNIELVKGVERASTTTVGALKTAITVAQAMTNQKLVLEQITALNTTTANIIDGTSKMLKDNTARI HEQAASSTIPMETLQRAFQNIYDTMDAIDTFKLKALDSMKTTVTTLEGEVAKSKGYIARAEGAAQAQASVGGAESPLTAI EG
Specific function: Unknown
COG id: COG3853
COG function: function code P; Uncharacterized protein involved in tellurite resistance
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43852; Mature: 43721
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVTATATATDELKLTPPEPVPAVTPDKAAGLVPLSTEQKSKLEERVDGFIDDLVAQDV CCCCCCCEECCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC NSPAFGQKVDQITNMGRKEMLEAANQSNRFLDRPIKAMDRDTDIGQNLIELRNTVERLDP CCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC SANGKLISKRGLLDKLFGSSVTNYFAKYRSAQSHISSILTALANGKDELLMDNAAIDVER CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCHHHHHH RKLWEAMGKLEQMVHIAQTLDRKLEEKAAELDGVDPAKAKVLRENALFYARQRTQDLLTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MAVTVQGYLALDLVKKNNIELVKGVERASTTTVGALKTAITVAQAMTNQKLVLEQITALN HHHHHHHHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC TTTANIIDGTSKMLKDNTARIHEQAASSTIPMETLQRAFQNIYDTMDAIDTFKLKALDSM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTTVTTLEGEVAKSKGYIARAEGAAQAQASVGGAESPLTAIEG HHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCCCHHCCC >Mature Secondary Structure SEVTATATATDELKLTPPEPVPAVTPDKAAGLVPLSTEQKSKLEERVDGFIDDLVAQDV CCCCCCEECCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC NSPAFGQKVDQITNMGRKEMLEAANQSNRFLDRPIKAMDRDTDIGQNLIELRNTVERLDP CCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC SANGKLISKRGLLDKLFGSSVTNYFAKYRSAQSHISSILTALANGKDELLMDNAAIDVER CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCHHHHHH RKLWEAMGKLEQMVHIAQTLDRKLEEKAAELDGVDPAKAKVLRENALFYARQRTQDLLTQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MAVTVQGYLALDLVKKNNIELVKGVERASTTTVGALKTAITVAQAMTNQKLVLEQITALN HHHHHHHHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC TTTANIIDGTSKMLKDNTARIHEQAASSTIPMETLQRAFQNIYDTMDAIDTFKLKALDSM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTTVTTLEGEVAKSKGYIARAEGAAQAQASVGGAESPLTAIEG HHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA