Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487790

Identifier: 103487790

GI number: 103487790

Start: 2437003

End: 2437737

Strand: Direct

Name: 103487790

Synonym: Sala_2309

Alternate gene names: NA

Gene position: 2437003-2437737 (Clockwise)

Preceding gene: 103487789

Following gene: 103487791

Centisome position: 72.85

GC content: 67.89

Gene sequence:

>735_bases
ATGAGCATGAGCGAAGTCGACAAGATCCGCCTCTCGGCCGAATCGGCGATCGAACGGTCGCGCGACCGGCGGCGGCCGAT
CGGCACCAAGAGCGTCGCGCTGCGCCGCCAGCATCTCTACAAGAAGCTGGGCCGGATGCTGATCGCGGGCGGCGTGCTGC
TGCTCGGCGCCGCTATCTTCGGCGCGCTGATCCAGCCGCTCGGCTTCACCGGGCTGCTCGCGCTCTTCGTCCTGCTTATC
GGCGTCGCGGTGCTGTTCGGCAAATGGCCACCCTTTCCCGAACCGCGCCAGGCGGATCTTCCGAAAACCGACTTGAAACA
GCTCGCCGGGCGCACCGAAATCTGGCTCGAGGCGCAGCGCCCCGCGCTGCCTGCCCCCGCACGCCAGCTGATCGACGGTA
TCGGCGTCCAGCTCGACCTGCTCGCGCCGCAACTCCAGACGCTCGACCCCGCGACACCCGCCGCAGCGAACATCCGCAAA
CTCGTCGGCGAGGATCTGCCCGAACTCGTCGCGGGCTATCAGCGCATCCCCGCGGGCCTCCGCACCGAAGCCCACGCCGG
CCGCACCCCCGACGAAACGCTCGTCGGCGGCCTGAAAATGCTCGAAAGCGAAATCGGCAATGCCGCGCGCAGCCTCGCCG
CAGGCGAACTCGACAAGCTCGCGACGCGCGAACGCTATCTCCAGCTCAAATATCAGGGGCTTGATGGCGATGACGGCACC
GGCCGCCAAGACTGA

Upstream 100 bases:

>100_bases
AAGGGCTATATCGCGCGCGCCGAGGGCGCGGCCCAGGCGCAGGCGAGCGTCGGCGGCGCCGAGAGCCCGCTCACCGCAAT
CGAGGGATGACGGCGACGCG

Downstream 100 bases:

>100_bases
CGCCGGGTTCCGGGTAAAGTCCACTGTCTGGAAACTGGATGCCCCGCGAGGATTCGAACCTCGATAGACGGAATCAGAAT
CCGTAGTCTTACCATTAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSMSEVDKIRLSAESAIERSRDRRRPIGTKSVALRRQHLYKKLGRMLIAGGVLLLGAAIFGALIQPLGFTGLLALFVLLI
GVAVLFGKWPPFPEPRQADLPKTDLKQLAGRTEIWLEAQRPALPAPARQLIDGIGVQLDLLAPQLQTLDPATPAAANIRK
LVGEDLPELVAGYQRIPAGLRTEAHAGRTPDETLVGGLKMLESEIGNAARSLAAGELDKLATRERYLQLKYQGLDGDDGT
GRQD

Sequences:

>Translated_244_residues
MSMSEVDKIRLSAESAIERSRDRRRPIGTKSVALRRQHLYKKLGRMLIAGGVLLLGAAIFGALIQPLGFTGLLALFVLLI
GVAVLFGKWPPFPEPRQADLPKTDLKQLAGRTEIWLEAQRPALPAPARQLIDGIGVQLDLLAPQLQTLDPATPAAANIRK
LVGEDLPELVAGYQRIPAGLRTEAHAGRTPDETLVGGLKMLESEIGNAARSLAAGELDKLATRERYLQLKYQGLDGDDGT
GRQD
>Mature_243_residues
SMSEVDKIRLSAESAIERSRDRRRPIGTKSVALRRQHLYKKLGRMLIAGGVLLLGAAIFGALIQPLGFTGLLALFVLLIG
VAVLFGKWPPFPEPRQADLPKTDLKQLAGRTEIWLEAQRPALPAPARQLIDGIGVQLDLLAPQLQTLDPATPAAANIRKL
VGEDLPELVAGYQRIPAGLRTEAHAGRTPDETLVGGLKMLESEIGNAARSLAAGELDKLATRERYLQLKYQGLDGDDGTG
RQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26420; Mature: 26289

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSEVDKIRLSAESAIERSRDRRRPIGTKSVALRRQHLYKKLGRMLIAGGVLLLGAAIF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALIQPLGFTGLLALFVLLIGVAVLFGKWPPFPEPRQADLPKTDLKQLAGRTEIWLEAQR
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCC
PALPAPARQLIDGIGVQLDLLAPQLQTLDPATPAAANIRKLVGEDLPELVAGYQRIPAGL
CCCCCHHHHHHHHCCCCHHHHCHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCC
RTEAHAGRTPDETLVGGLKMLESEIGNAARSLAAGELDKLATRERYLQLKYQGLDGDDGT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GRQD
CCCC
>Mature Secondary Structure 
SMSEVDKIRLSAESAIERSRDRRRPIGTKSVALRRQHLYKKLGRMLIAGGVLLLGAAIF
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALIQPLGFTGLLALFVLLIGVAVLFGKWPPFPEPRQADLPKTDLKQLAGRTEIWLEAQR
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCC
PALPAPARQLIDGIGVQLDLLAPQLQTLDPATPAAANIRKLVGEDLPELVAGYQRIPAGL
CCCCCHHHHHHHHCCCCHHHHCHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCC
RTEAHAGRTPDETLVGGLKMLESEIGNAARSLAAGELDKLATRERYLQLKYQGLDGDDGT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GRQD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA