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The map label for this gene is bepC [H]

Identifier: 103487743

GI number: 103487743

Start: 2380376

End: 2381869

Strand: Direct

Name: bepC [H]

Synonym: Sala_2262

Alternate gene names: 103487743

Gene position: 2380376-2381869 (Clockwise)

Preceding gene: 103487742

Following gene: 103487744

Centisome position: 71.16

GC content: 68.27

Gene sequence:

>1494_bases
ATGACCGATAGCGACAAGAAACCGTGCCCTCGTCGTGCCCGCTGGCTTGCCGGCCTCGCCGCCAGCGCGCTGATGCTGCC
GATGGCGGCCGAGGCCGAAACCCTCCAGGGGGCACTCGCCAAGGCCTATGAAAACAATCCGACGCTGACCGGCGCGCGCG
CGGGCCAGCGCGCCGCCGACGAAAATGTGCCGATCGAAAAAAGCCGCGGCCTGCCCGAAGTCGGCACGCAGGCGAGTTAT
GAAGAAAATCTGATCATCCCCGGCAATGCGTTCAACTCGCCCGCGCGATCATTGACGGCAGGCGCGCGGCTGACCGTTCC
GATCTATCAGGGCGGCGCGGTGCGCAACGCGGTGCGCGCGGCGAAATATCGCGTCGAGGCGGGGCAGGCCAATCTGCGCG
CGACCGAGGCGAGCATCTTTTCGCAGGTGGTCGGCGCCTATATGGACGTCATCCGCGACCAGGCGATCGTCCAGCTCAAC
CAGAAAAATGTCGCGGTGCTGCGCACCAATTTACAGGCGACGAGCGACCGCTTCGAAATCGGCGACCTCACCCGCACCGA
CGTCGCCCAGTCGGAGGCGCGCCTCGCGCTCGCCGAGGGCGACCTCAGGACCGCCGAAGCCAATCTGATCGCCAGCCGCG
AAGCCTATATCCGGCTCGTCGGCGAAGCGCCGGTCGATCTCGAGCCGCCGCCGCCGCTGCCCAACCTGCCCGCCACCGCC
GAGGAAGCTGTCGCGATCGCGCTGGACAACAACCCCGACATCGAGGCCGCGGACCAGCAGGTCAAGGCGTCGCGCGCCGA
CATCGGCACCGCCAAGTCGAGCCGCGCGCCCAGGGTGTCGGCGATCCTCAGCGGCGGTTACAATAATTTCCTCGGTTCGC
TGAACAGCGGCGTTCCCGGCGTCAGCGTGACGCAGGAAACGTCGAGCGCCGCGGCGGGGGTCGAGGTCACGCTGCCGATC
TTCACCGCCGGCCGCCGTTCGGCGCAGGTCCGGCAGGCGCAATCGCGCAGCAGCCAGGCGATCGAACAATATGTCGAGGT
CGAACGCGGCGTGATCGCCCAGACGCGCGGCGCCTATGCCGCATGGCAGGCGAACGAGCGCATCATCGCCGCGACGCGGC
AGGCGGTCGGCGCGAACGCGCTTTCGCTCGAGGGGGTGCGCGCCGAAAACAGCGTCGGCACGCGCTCAATCCTCGACATA
TTGAACGCCGAGCAGGAATATCTGAACACGCAGGTCCAGCTTGTTTCGGCGCAGCGCAACAGCTACGTCGCCGCTTTCTC
GCTCCTCGCCGCGATGGGCAAGGCCGAGGCGCGCGATCTGGGGATCGAGGGCGGCGCGCTCTACGACCCCGAGGTCAATT
ACCGCCGCGTGAAGGGGCAGCTGTGGGACTGGGCAGACGATCCGGCGCCGCAACAGGTCGCAACCGACACGCGCGCCGTC
CCGCCCGCCGACGCCGCCATCCCCGAAGGGCCGCCCGCGCCCACGCCACAATAA

Upstream 100 bases:

>100_bases
TTGCCGACATGGACGTTGCGCCGCTGCCCGGTTTCGCCGCCCCGACCGGCTTCCGTTTCTGAGCTGTCCCTCCCCCTCCT
TGTTTCAGGCTGACACCACG

Downstream 100 bases:

>100_bases
AGCTTGGCAAAGGTCGCCCGGAATCTTTAAGACAAGGGTTAACCATCCGGTAATCGCGATGGTTTAGGGGGCTTGTATGG
GCGATATGTCGCGGGAACCG

Product: Type I secretion outer membrane protein, TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MTDSDKKPCPRRARWLAGLAASALMLPMAAEAETLQGALAKAYENNPTLTGARAGQRAADENVPIEKSRGLPEVGTQASY
EENLIIPGNAFNSPARSLTAGARLTVPIYQGGAVRNAVRAAKYRVEAGQANLRATEASIFSQVVGAYMDVIRDQAIVQLN
QKNVAVLRTNLQATSDRFEIGDLTRTDVAQSEARLALAEGDLRTAEANLIASREAYIRLVGEAPVDLEPPPPLPNLPATA
EEAVAIALDNNPDIEAADQQVKASRADIGTAKSSRAPRVSAILSGGYNNFLGSLNSGVPGVSVTQETSSAAAGVEVTLPI
FTAGRRSAQVRQAQSRSSQAIEQYVEVERGVIAQTRGAYAAWQANERIIAATRQAVGANALSLEGVRAENSVGTRSILDI
LNAEQEYLNTQVQLVSAQRNSYVAAFSLLAAMGKAEARDLGIEGGALYDPEVNYRRVKGQLWDWADDPAPQQVATDTRAV
PPADAAIPEGPPAPTPQ

Sequences:

>Translated_497_residues
MTDSDKKPCPRRARWLAGLAASALMLPMAAEAETLQGALAKAYENNPTLTGARAGQRAADENVPIEKSRGLPEVGTQASY
EENLIIPGNAFNSPARSLTAGARLTVPIYQGGAVRNAVRAAKYRVEAGQANLRATEASIFSQVVGAYMDVIRDQAIVQLN
QKNVAVLRTNLQATSDRFEIGDLTRTDVAQSEARLALAEGDLRTAEANLIASREAYIRLVGEAPVDLEPPPPLPNLPATA
EEAVAIALDNNPDIEAADQQVKASRADIGTAKSSRAPRVSAILSGGYNNFLGSLNSGVPGVSVTQETSSAAAGVEVTLPI
FTAGRRSAQVRQAQSRSSQAIEQYVEVERGVIAQTRGAYAAWQANERIIAATRQAVGANALSLEGVRAENSVGTRSILDI
LNAEQEYLNTQVQLVSAQRNSYVAAFSLLAAMGKAEARDLGIEGGALYDPEVNYRRVKGQLWDWADDPAPQQVATDTRAV
PPADAAIPEGPPAPTPQ
>Mature_496_residues
TDSDKKPCPRRARWLAGLAASALMLPMAAEAETLQGALAKAYENNPTLTGARAGQRAADENVPIEKSRGLPEVGTQASYE
ENLIIPGNAFNSPARSLTAGARLTVPIYQGGAVRNAVRAAKYRVEAGQANLRATEASIFSQVVGAYMDVIRDQAIVQLNQ
KNVAVLRTNLQATSDRFEIGDLTRTDVAQSEARLALAEGDLRTAEANLIASREAYIRLVGEAPVDLEPPPPLPNLPATAE
EAVAIALDNNPDIEAADQQVKASRADIGTAKSSRAPRVSAILSGGYNNFLGSLNSGVPGVSVTQETSSAAAGVEVTLPIF
TAGRRSAQVRQAQSRSSQAIEQYVEVERGVIAQTRGAYAAWQANERIIAATRQAVGANALSLEGVRAENSVGTRSILDIL
NAEQEYLNTQVQLVSAQRNSYVAAFSLLAAMGKAEARDLGIEGGALYDPEVNYRRVKGQLWDWADDPAPQQVATDTRAVP
PADAAIPEGPPAPTPQ

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=434, Percent_Identity=25.5760368663594, Blast_Score=93, Evalue=5e-20,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 52595; Mature: 52464

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSDKKPCPRRARWLAGLAASALMLPMAAEAETLQGALAKAYENNPTLTGARAGQRAAD
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCC
ENVPIEKSRGLPEVGTQASYEENLIIPGNAFNSPARSLTAGARLTVPIYQGGAVRNAVRA
CCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCEEEEEEECCCHHHHHHHH
AKYRVEAGQANLRATEASIFSQVVGAYMDVIRDQAIVQLNQKNVAVLRTNLQATSDRFEI
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEECCHHCCCCEEC
GDLTRTDVAQSEARLALAEGDLRTAEANLIASREAYIRLVGEAPVDLEPPPPLPNLPATA
CCCCHHHHHHHHHEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
EEAVAIALDNNPDIEAADQQVKASRADIGTAKSSRAPRVSAILSGGYNNFLGSLNSGVPG
CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCC
VSVTQETSSAAAGVEVTLPIFTAGRRSAQVRQAQSRSSQAIEQYVEVERGVIAQTRGAYA
CEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEE
AWQANERIIAATRQAVGANALSLEGVRAENSVGTRSILDILNAEQEYLNTQVQLVSAQRN
EECCCCEEEEHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHCCHHHHHCHHHEEEEHHCC
SYVAAFSLLAAMGKAEARDLGIEGGALYDPEVNYRRVKGQLWDWADDPAPQQVATDTRAV
CHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCCEECCCCCCCCCCCCCCHHHHCCCCCC
PPADAAIPEGPPAPTPQ
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDSDKKPCPRRARWLAGLAASALMLPMAAEAETLQGALAKAYENNPTLTGARAGQRAAD
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCC
ENVPIEKSRGLPEVGTQASYEENLIIPGNAFNSPARSLTAGARLTVPIYQGGAVRNAVRA
CCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCEEEEEEECCCHHHHHHHH
AKYRVEAGQANLRATEASIFSQVVGAYMDVIRDQAIVQLNQKNVAVLRTNLQATSDRFEI
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEECCHHCCCCEEC
GDLTRTDVAQSEARLALAEGDLRTAEANLIASREAYIRLVGEAPVDLEPPPPLPNLPATA
CCCCHHHHHHHHHEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
EEAVAIALDNNPDIEAADQQVKASRADIGTAKSSRAPRVSAILSGGYNNFLGSLNSGVPG
CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCC
VSVTQETSSAAAGVEVTLPIFTAGRRSAQVRQAQSRSSQAIEQYVEVERGVIAQTRGAYA
CEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEE
AWQANERIIAATRQAVGANALSLEGVRAENSVGTRSILDILNAEQEYLNTQVQLVSAQRN
EECCCCEEEEHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHCCHHHHHCHHHEEEEHHCC
SYVAAFSLLAAMGKAEARDLGIEGGALYDPEVNYRRVKGQLWDWADDPAPQQVATDTRAV
CHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCCEECCCCCCCCCCCCCCHHHHCCCCCC
PPADAAIPEGPPAPTPQ
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]