Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487744

Identifier: 103487744

GI number: 103487744

Start: 2381973

End: 2382398

Strand: Direct

Name: 103487744

Synonym: Sala_2263

Alternate gene names: NA

Gene position: 2381973-2382398 (Clockwise)

Preceding gene: 103487743

Following gene: 103487748

Centisome position: 71.21

GC content: 70.66

Gene sequence:

>426_bases
ATGGAAGACATCTTGTCGTCGATTCGGCGCGTGATCGCCCGCGACGAGGCGCCCGGCGCCGCGCGCGAGATTCGCGTCCC
CGAAGCCGACGATATTCTCGACCTTCAGGATCGCGACGAACGCGCCGCGTCCGTTTCCGGGGCCGCGTCCGTTTCCGGGG
ACGCGCCCGCCGCTGACGACGATCTTGTCTCCGAAGCGAGCGCCGACGCCGCGCGCCAGTCGCTCGAGGCGCTGACCGCC
GTGGTCGCGCCCGCGGTTGCCGCGGCGACCGCCCCCGCGCCGGCCGCGGCGGGCCGCACGATGGAAGAGGTCGTGCTCGA
CGCGCTCCGCCCGATGCTGAAAGAATGGCTCGACGCCAATCTGCCCGCGCTGGTCGAGGCAATGGTGGCGAAGGAAATCA
GCCGGATTACAGGCAAGCGGGGTTAG

Upstream 100 bases:

>100_bases
TTGGCAAAGGTCGCCCGGAATCTTTAAGACAAGGGTTAACCATCCGGTAATCGCGATGGTTTAGGGGGCTTGTATGGGCG
ATATGTCGCGGGAACCGTCG

Downstream 100 bases:

>100_bases
GCACCTGCCTTCATAATGACCGTTGGCCGCTATGGCCGCTAACGACCGAACCTAGCCGTCGCCCCGCACAGGCGGGGGCC
GCTGTCGGATTAAGCAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MEDILSSIRRVIARDEAPGAAREIRVPEADDILDLQDRDERAASVSGAASVSGDAPAADDDLVSEASADAARQSLEALTA
VVAPAVAAATAPAPAAAGRTMEEVVLDALRPMLKEWLDANLPALVEAMVAKEISRITGKRG

Sequences:

>Translated_141_residues
MEDILSSIRRVIARDEAPGAAREIRVPEADDILDLQDRDERAASVSGAASVSGDAPAADDDLVSEASADAARQSLEALTA
VVAPAVAAATAPAPAAAGRTMEEVVLDALRPMLKEWLDANLPALVEAMVAKEISRITGKRG
>Mature_141_residues
MEDILSSIRRVIARDEAPGAAREIRVPEADDILDLQDRDERAASVSGAASVSGDAPAADDDLVSEASADAARQSLEALTA
VVAPAVAAATAPAPAAAGRTMEEVVLDALRPMLKEWLDANLPALVEAMVAKEISRITGKRG

Specific function: Unknown

COG id: COG3827

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14598; Mature: 14598

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDILSSIRRVIARDEAPGAAREIRVPEADDILDLQDRDERAASVSGAASVSGDAPAADD
CHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCH
DLVSEASADAARQSLEALTAVVAPAVAAATAPAPAAAGRTMEEVVLDALRPMLKEWLDAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCC
LPALVEAMVAKEISRITGKRG
CHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEDILSSIRRVIARDEAPGAAREIRVPEADDILDLQDRDERAASVSGAASVSGDAPAADD
CHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCH
DLVSEASADAARQSLEALTAVVAPAVAAATAPAPAAAGRTMEEVVLDALRPMLKEWLDAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCC
LPALVEAMVAKEISRITGKRG
CHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA