Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487738

Identifier: 103487738

GI number: 103487738

Start: 2370952

End: 2371809

Strand: Reverse

Name: 103487738

Synonym: Sala_2257

Alternate gene names: NA

Gene position: 2371809-2370952 (Counterclockwise)

Preceding gene: 103487739

Following gene: 103487730

Centisome position: 70.9

GC content: 69.81

Gene sequence:

>858_bases
ATGCCTTATCAGCCCCGCGTCGCGATCCTTGTCCCGGCGCCCGACTATGAGGAAAAATGGCAGCCGGCCTTTGCGCGCAA
GGCGGCGGCGCTGACCGCGGCCGGGCTGATCGTCGAGCAGCGCGTGTGGACCGATCCGGGCGACCTCGCGGGGCATGATC
TGGTGCTGCCGCTTTTCGCCTGGGGGTATCAGCGCAACGTCGCGGCCTGGTATGGCCTGCTCGACCGGCTGGGGGACGAG
GGGCTGCCGGTGGTCAATCCGGTGCCGGTGCTGCGATGGAACAGCGACAAGGCCTATCTTGCCGATCTGGCGGCCAAGGG
CGTCGCGGTGGTGCCGACGGTCGACGTGGCGGCGCTCGATGCCGCGGCGCTGGCCGATGCGTGCGCGAGGCTGGGCACCG
AAGAGGTCGTGATAAAGCCCGCGATTTCGGGCGGCGCCGACGGCACGCACCGGATCGCGCCCGGCGCCGCGATTCCCGCC
GACGCGCTGGGACAGCGCCGCCTCGTCCAGCCCTTGATGCCCGGCATCCTGACCGAGGGCGAAGTCTCGCTCTTCTTCTT
CGGTGGCCGCTTCAGCCACGCGATCGTCAAGCGCCCCGCGGCGGGCGATTTTCGCGTGCAGGAACAGTTCGGCGGACGCG
AGACGGCATGGGAAGCAAAGGATGCGGCGCGCACACTCGCGGCGATGGCGCTGGCCGCGGCGCCGCTTCCCCCGGCCTAT
GCGCGTGTCGACATGGTCGGCGATGCGGCGGGACGCCTGCATCTGATGGAGCTTGAACTGATCGAGCCGTCGCTGTTCCT
TCACCATGCGCCCGACAAGGGGGCGGCGTTTGCCCAGGCGGTTTACGCCGCGGTCTGA

Upstream 100 bases:

>100_bases
GTGAAGTTCCCAGACCCCTCTCCAACTCCGGCTAGCGAACAGGTTCGCAAGCCTCCATATCCTCTCCCCTGAAGGGGAGA
GGGCATCGCGAGATCCACCC

Downstream 100 bases:

>100_bases
TCGCTGCGGCGATGCCACAGCCATTGGCGGATCGCCGAAGTGAGGTTCGGCGGATCGTCCGCCTCCATCCGCTCGACATC
GATGCGCGCGACGAGCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MPYQPRVAILVPAPDYEEKWQPAFARKAAALTAAGLIVEQRVWTDPGDLAGHDLVLPLFAWGYQRNVAAWYGLLDRLGDE
GLPVVNPVPVLRWNSDKAYLADLAAKGVAVVPTVDVAALDAAALADACARLGTEEVVIKPAISGGADGTHRIAPGAAIPA
DALGQRRLVQPLMPGILTEGEVSLFFFGGRFSHAIVKRPAAGDFRVQEQFGGRETAWEAKDAARTLAAMALAAAPLPPAY
ARVDMVGDAAGRLHLMELELIEPSLFLHHAPDKGAAFAQAVYAAV

Sequences:

>Translated_285_residues
MPYQPRVAILVPAPDYEEKWQPAFARKAAALTAAGLIVEQRVWTDPGDLAGHDLVLPLFAWGYQRNVAAWYGLLDRLGDE
GLPVVNPVPVLRWNSDKAYLADLAAKGVAVVPTVDVAALDAAALADACARLGTEEVVIKPAISGGADGTHRIAPGAAIPA
DALGQRRLVQPLMPGILTEGEVSLFFFGGRFSHAIVKRPAAGDFRVQEQFGGRETAWEAKDAARTLAAMALAAAPLPPAY
ARVDMVGDAAGRLHLMELELIEPSLFLHHAPDKGAAFAQAVYAAV
>Mature_284_residues
PYQPRVAILVPAPDYEEKWQPAFARKAAALTAAGLIVEQRVWTDPGDLAGHDLVLPLFAWGYQRNVAAWYGLLDRLGDEG
LPVVNPVPVLRWNSDKAYLADLAAKGVAVVPTVDVAALDAAALADACARLGTEEVVIKPAISGGADGTHRIAPGAAIPAD
ALGQRRLVQPLMPGILTEGEVSLFFFGGRFSHAIVKRPAAGDFRVQEQFGGRETAWEAKDAARTLAAMALAAAPLPPAYA
RVDMVGDAAGRLHLMELELIEPSLFLHHAPDKGAAFAQAVYAAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30193; Mature: 30062

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00187 TPP_ENZYMES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYQPRVAILVPAPDYEEKWQPAFARKAAALTAAGLIVEQRVWTDPGDLAGHDLVLPLFA
CCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
WGYQRNVAAWYGLLDRLGDEGLPVVNPVPVLRWNSDKAYLADLAAKGVAVVPTVDVAALD
CCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHCCEEEECCCCHHHHH
AAALADACARLGTEEVVIKPAISGGADGTHRIAPGAAIPADALGQRRLVQPLMPGILTEG
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCC
EVSLFFFGGRFSHAIVKRPAAGDFRVQEQFGGRETAWEAKDAARTLAAMALAAAPLPPAY
CEEEEEECCCHHHHHHCCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
ARVDMVGDAAGRLHLMELELIEPSLFLHHAPDKGAAFAQAVYAAV
HHEEEECCCCCCEEEEEEEEECCEEEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PYQPRVAILVPAPDYEEKWQPAFARKAAALTAAGLIVEQRVWTDPGDLAGHDLVLPLFA
CCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
WGYQRNVAAWYGLLDRLGDEGLPVVNPVPVLRWNSDKAYLADLAAKGVAVVPTVDVAALD
CCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHCCEEEECCCCHHHHH
AAALADACARLGTEEVVIKPAISGGADGTHRIAPGAAIPADALGQRRLVQPLMPGILTEG
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCC
EVSLFFFGGRFSHAIVKRPAAGDFRVQEQFGGRETAWEAKDAARTLAAMALAAAPLPPAY
CEEEEEECCCHHHHHHCCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
ARVDMVGDAAGRLHLMELELIEPSLFLHHAPDKGAAFAQAVYAAV
HHEEEECCCCCCEEEEEEEEECCEEEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA