Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487726

Identifier: 103487726

GI number: 103487726

Start: 2357356

End: 2358447

Strand: Direct

Name: 103487726

Synonym: Sala_2245

Alternate gene names: NA

Gene position: 2357356-2358447 (Clockwise)

Preceding gene: 103487725

Following gene: 103487727

Centisome position: 70.47

GC content: 68.59

Gene sequence:

>1092_bases
ATGCTGACCAAGGGCGACGATTACCCGCTGCACCAGCGCGCCGAGCCGATCGCGTTCGCGGGCGCCGACCGCAATTTTTA
CGACCGCTATTTCTTCAACGGCTATGCGCCCGACGGGTCGGTCTTTTTCGCCGCGGCGATGGGCTTTTATCCGCAGCTCG
GCATTGTCGACGCCAGCTTTTCGGTCATCGTCGATGATGTCCAGCATATCCTGCACGCCAGCCGCCGGTCGGACGGCGAA
CGGCTCGACCTGTCGGTCGGGCCGGTCGCAATTACAATCGACGCGCCGCTTGAAACGGTGACGCTGCGCATCGCGCCGAA
CGACGGGCTGCTCGCAGGCGAGCTGCGCTTCGCCGGGCGCCATTTCCCGATCGAGGAACCGCGCTTCACGCGCCGCAACG
GCACGCGGCTGTTCATGGACTATACGCGCATGACGCAGAACGGCCGCTGGTCGGGCTGGTTGTCGGTCGGCGGCCAGCGC
GTCGATGTCGCCGATGGCTGGACGGGCACACGCGACCGCAGCTGGGGCATCCGCCCGGTCGGCGCAAGCGAGCCGCAGCC
ACCACCGGGGGGCAATTTCGCGCAATTCTTCTGGCTGTGGACGCCGTGCAATTTCGCCGACCGCTCGCTCTTCTTTCACA
GCAACGACGATGCCGCTGGCGCGCCGTGGAACCGCCGCGCCGTCATCGTGACCGACAAGGGGACCGAGACGCATTTCGAC
GCCGCGCGCTTTGCAATCAGCTGGCAGCCCGGAACGCGGCGCATCGCCGACCTGTCCGCCGACCTCGGCAGCGACCGGCG
GCTGACCTTGACCCCGACCGGCCCCGTCGTTGCGATGAGCGGGCTCGGCTATACCCACCCCGTCTGGGGGCACGGGCTCG
ACCATGGGCCGGACCTGGCGGTGGCGCACGACGCGCTCACTGCCGAGGAGCGCCGCTGGGCCAATCCGCTCGCGATGCAC
ATCCAGGCGCTCGTCACCGCCGACCTTTCCGATGGCGGCACGCTCCACCGCGGCGTCGGCGTGCTCGAACAATTGTTCGT
CGGGCCGCACGCGCCGACCGGCCTGTCGGGGCTGATGGACCCCGCGCCTTGA

Upstream 100 bases:

>100_bases
CCCGTCGCGCCCGTCCACGCCGTCCCGCCCGTCGATCCGCCGGTGCATTGACGCGCGCGTCCATCCCGTTAGGTTGCAAC
AAAAAACGGGATGAGGGACG

Downstream 100 bases:

>100_bases
GTTTTCCGACCGCGCCCGGCGCGATGACGCCCGACTGGCTCGGCGCGGTGCTGGGGCATCCCGGCCAGCTCCGGGGCTTT
ACCGCGGCCAAGGTCGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MLTKGDDYPLHQRAEPIAFAGADRNFYDRYFFNGYAPDGSVFFAAAMGFYPQLGIVDASFSVIVDDVQHILHASRRSDGE
RLDLSVGPVAITIDAPLETVTLRIAPNDGLLAGELRFAGRHFPIEEPRFTRRNGTRLFMDYTRMTQNGRWSGWLSVGGQR
VDVADGWTGTRDRSWGIRPVGASEPQPPPGGNFAQFFWLWTPCNFADRSLFFHSNDDAAGAPWNRRAVIVTDKGTETHFD
AARFAISWQPGTRRIADLSADLGSDRRLTLTPTGPVVAMSGLGYTHPVWGHGLDHGPDLAVAHDALTAEERRWANPLAMH
IQALVTADLSDGGTLHRGVGVLEQLFVGPHAPTGLSGLMDPAP

Sequences:

>Translated_363_residues
MLTKGDDYPLHQRAEPIAFAGADRNFYDRYFFNGYAPDGSVFFAAAMGFYPQLGIVDASFSVIVDDVQHILHASRRSDGE
RLDLSVGPVAITIDAPLETVTLRIAPNDGLLAGELRFAGRHFPIEEPRFTRRNGTRLFMDYTRMTQNGRWSGWLSVGGQR
VDVADGWTGTRDRSWGIRPVGASEPQPPPGGNFAQFFWLWTPCNFADRSLFFHSNDDAAGAPWNRRAVIVTDKGTETHFD
AARFAISWQPGTRRIADLSADLGSDRRLTLTPTGPVVAMSGLGYTHPVWGHGLDHGPDLAVAHDALTAEERRWANPLAMH
IQALVTADLSDGGTLHRGVGVLEQLFVGPHAPTGLSGLMDPAP
>Mature_363_residues
MLTKGDDYPLHQRAEPIAFAGADRNFYDRYFFNGYAPDGSVFFAAAMGFYPQLGIVDASFSVIVDDVQHILHASRRSDGE
RLDLSVGPVAITIDAPLETVTLRIAPNDGLLAGELRFAGRHFPIEEPRFTRRNGTRLFMDYTRMTQNGRWSGWLSVGGQR
VDVADGWTGTRDRSWGIRPVGASEPQPPPGGNFAQFFWLWTPCNFADRSLFFHSNDDAAGAPWNRRAVIVTDKGTETHFD
AARFAISWQPGTRRIADLSADLGSDRRLTLTPTGPVVAMSGLGYTHPVWGHGLDHGPDLAVAHDALTAEERRWANPLAMH
IQALVTADLSDGGTLHRGVGVLEQLFVGPHAPTGLSGLMDPAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39730; Mature: 39730

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKGDDYPLHQRAEPIAFAGADRNFYDRYFFNGYAPDGSVFFAAAMGFYPQLGIVDASF
CCCCCCCCCCHHCCCCEEEECCCCCCCHHHEECCCCCCCCEEEEEHHCCCCCCEEECCHH
SVIVDDVQHILHASRRSDGERLDLSVGPVAITIDAPLETVTLRIAPNDGLLAGELRFAGR
HHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCEEEEEEECCCCCEEEEEEEECCC
HFPIEEPRFTRRNGTRLFMDYTRMTQNGRWSGWLSVGGQRVDVADGWTGTRDRSWGIRPV
CCCCCCCCCCCCCCCEEEEEEEHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEC
GASEPQPPPGGNFAQFFWLWTPCNFADRSLFFHSNDDAAGAPWNRRAVIVTDKGTETHFD
CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCC
AARFAISWQPGTRRIADLSADLGSDRRLTLTPTGPVVAMSGLGYTHPVWGHGLDHGPDLA
EEEEEEEECCCCCEEHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEE
VAHDALTAEERRWANPLAMHIQALVTADLSDGGTLHRGVGVLEQLFVGPHAPTGLSGLMD
EEHHHHHHHHHHCCCHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PAP
CCC
>Mature Secondary Structure
MLTKGDDYPLHQRAEPIAFAGADRNFYDRYFFNGYAPDGSVFFAAAMGFYPQLGIVDASF
CCCCCCCCCCHHCCCCEEEECCCCCCCHHHEECCCCCCCCEEEEEHHCCCCCCEEECCHH
SVIVDDVQHILHASRRSDGERLDLSVGPVAITIDAPLETVTLRIAPNDGLLAGELRFAGR
HHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCEEEEEEECCCCCEEEEEEEECCC
HFPIEEPRFTRRNGTRLFMDYTRMTQNGRWSGWLSVGGQRVDVADGWTGTRDRSWGIRPV
CCCCCCCCCCCCCCCEEEEEEEHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEC
GASEPQPPPGGNFAQFFWLWTPCNFADRSLFFHSNDDAAGAPWNRRAVIVTDKGTETHFD
CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCC
AARFAISWQPGTRRIADLSADLGSDRRLTLTPTGPVVAMSGLGYTHPVWGHGLDHGPDLA
EEEEEEEECCCCCEEHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEE
VAHDALTAEERRWANPLAMHIQALVTADLSDGGTLHRGVGVLEQLFVGPHAPTGLSGLMD
EEHHHHHHHHHHCCCHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PAP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA