Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487727

Identifier: 103487727

GI number: 103487727

Start: 2358444

End: 2359484

Strand: Direct

Name: 103487727

Synonym: Sala_2246

Alternate gene names: NA

Gene position: 2358444-2359484 (Clockwise)

Preceding gene: 103487726

Following gene: 103487731

Centisome position: 70.5

GC content: 70.32

Gene sequence:

>1041_bases
TTGAGTTTTCCGACCGCGCCCGGCGCGATGACGCCCGACTGGCTCGGCGCGGTGCTGGGGCATCCCGGCCAGCTCCGGGG
CTTTACCGCGGCCAAGGTCGGCACGGGGCAGATGTGCGACAGCTTCCGCCTGACGCTCGACTGGGCGGACGATGTGCGCG
GCCCGACGAGCGTAATCGCCAAATGTCCGAGCCACGACGAAGCGAGCCGCCATATCGCGCGGCTGACCGGCACCTATGTC
AAGGAAGTCAGCTGGTATCGCGAACTCGCGGCGGACAGCGGTGTCGCGGCGCCGCAGTGCCATCATGCCGAAATTGCGGG
CGATGGTGTCGATTTCATCCTCATCCTCGCCGATCTCGCGCCCGCCCGGCAGGGCGATCAGCTCGCGGGTATCGACGCCG
CCTGGCTCGTCCCCTGCATCGACGCGGCGGCGGCGCTGCACGCCCTGCTCTGGAACGACCCGCGGCTGGGCACGCTGCCC
TGGCTCGCGCGCGACAATGGCGATGTGGTGCGCGCGCTGTTCCCGCAGCTCTATGCCGGGTTTCGCGAACGCTATGCGGC
GCGGCTCGCGTCCGAGGTGCTGGACCTCGGCGCCGGAATCGTCCAGCGGCTCGACTGCTATCTCGCGCGCGAACCCGCCG
CGCGCACGATCGTCCACGGCGACCTGCGCATCGACAATATCCTGTTCGCGCCGGACGGCCAGGCCTGCTGGCTCGTCGAC
TGGCAGACGCTGGGGCGCGGCAGCGGCGCCGCCGACCTGGCCTATCTCGTCGGCACCAGCATCGCCGATCCGGCCGAGCG
CGCCGCCGCCGACCGGCCGGCGTTCGACCAGTGGATCGCCGCGCTTCGGGCGCGCGGCATAGCGCCCGATCCTGATGCGT
TATGGACCGATTATCGCGTCGGCGCGCTCAGCGGCTATTTCATGGCGGTCTTCGCCTCGATGAGCGTCGAGCGCACGCCG
CGCGGCGACGAAATGTTCGCGCTGATGGCCGAACGCCCCGCGCGCCAGGCGCTCGACCTCGGCAGTCTCGACCTGCTTTA
G

Upstream 100 bases:

>100_bases
CCGATGGCGGCACGCTCCACCGCGGCGTCGGCGTGCTCGAACAATTGTTCGTCGGGCCGCACGCGCCGACCGGCCTGTCG
GGGCTGATGGACCCCGCGCC

Downstream 100 bases:

>100_bases
AGCCGATGACCTGCTGGAGCGGCGTGCGGCCGCGAAATCTGTCGCGAACCCCGCCATCAGGCCGCGGCCGACGCTCGCCG
AATCGGCGTCGAAGAGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphotransferase Family Protein; Conserved Domain Protein; Protein Kinase-Like Protein

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MSFPTAPGAMTPDWLGAVLGHPGQLRGFTAAKVGTGQMCDSFRLTLDWADDVRGPTSVIAKCPSHDEASRHIARLTGTYV
KEVSWYRELAADSGVAAPQCHHAEIAGDGVDFILILADLAPARQGDQLAGIDAAWLVPCIDAAAALHALLWNDPRLGTLP
WLARDNGDVVRALFPQLYAGFRERYAARLASEVLDLGAGIVQRLDCYLAREPAARTIVHGDLRIDNILFAPDGQACWLVD
WQTLGRGSGAADLAYLVGTSIADPAERAAADRPAFDQWIAALRARGIAPDPDALWTDYRVGALSGYFMAVFASMSVERTP
RGDEMFALMAERPARQALDLGSLDLL

Sequences:

>Translated_346_residues
MSFPTAPGAMTPDWLGAVLGHPGQLRGFTAAKVGTGQMCDSFRLTLDWADDVRGPTSVIAKCPSHDEASRHIARLTGTYV
KEVSWYRELAADSGVAAPQCHHAEIAGDGVDFILILADLAPARQGDQLAGIDAAWLVPCIDAAAALHALLWNDPRLGTLP
WLARDNGDVVRALFPQLYAGFRERYAARLASEVLDLGAGIVQRLDCYLAREPAARTIVHGDLRIDNILFAPDGQACWLVD
WQTLGRGSGAADLAYLVGTSIADPAERAAADRPAFDQWIAALRARGIAPDPDALWTDYRVGALSGYFMAVFASMSVERTP
RGDEMFALMAERPARQALDLGSLDLL
>Mature_345_residues
SFPTAPGAMTPDWLGAVLGHPGQLRGFTAAKVGTGQMCDSFRLTLDWADDVRGPTSVIAKCPSHDEASRHIARLTGTYVK
EVSWYRELAADSGVAAPQCHHAEIAGDGVDFILILADLAPARQGDQLAGIDAAWLVPCIDAAAALHALLWNDPRLGTLPW
LARDNGDVVRALFPQLYAGFRERYAARLASEVLDLGAGIVQRLDCYLAREPAARTIVHGDLRIDNILFAPDGQACWLVDW
QTLGRGSGAADLAYLVGTSIADPAERAAADRPAFDQWIAALRARGIAPDPDALWTDYRVGALSGYFMAVFASMSVERTPR
GDEMFALMAERPARQALDLGSLDLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37235; Mature: 37103

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00109 PROTEIN_KINASE_TYR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFPTAPGAMTPDWLGAVLGHPGQLRGFTAAKVGTGQMCDSFRLTLDWADDVRGPTSVIA
CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECHHCCCCHHHHHH
KCPSHDEASRHIARLTGTYVKEVSWYRELAADSGVAAPQCHHAEIAGDGVDFILILADLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEEHHHHHHC
PARQGDQLAGIDAAWLVPCIDAAAALHALLWNDPRLGTLPWLARDNGDVVRALFPQLYAG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHH
FRERYAARLASEVLDLGAGIVQRLDCYLAREPAARTIVHGDLRIDNILFAPDGQACWLVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCEEEEEEEECCCCCEEEEEE
WQTLGRGSGAADLAYLVGTSIADPAERAAADRPAFDQWIAALRARGIAPDPDALWTDYRV
HHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHCCCHH
GALSGYFMAVFASMSVERTPRGDEMFALMAERPARQALDLGSLDLL
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHCCCCCCCC
>Mature Secondary Structure 
SFPTAPGAMTPDWLGAVLGHPGQLRGFTAAKVGTGQMCDSFRLTLDWADDVRGPTSVIA
CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECHHCCCCHHHHHH
KCPSHDEASRHIARLTGTYVKEVSWYRELAADSGVAAPQCHHAEIAGDGVDFILILADLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEEHHHHHHC
PARQGDQLAGIDAAWLVPCIDAAAALHALLWNDPRLGTLPWLARDNGDVVRALFPQLYAG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHH
FRERYAARLASEVLDLGAGIVQRLDCYLAREPAARTIVHGDLRIDNILFAPDGQACWLVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCEEEEEEEECCCCCEEEEEE
WQTLGRGSGAADLAYLVGTSIADPAERAAADRPAFDQWIAALRARGIAPDPDALWTDYRV
HHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHCCCHH
GALSGYFMAVFASMSVERTPRGDEMFALMAERPARQALDLGSLDLL
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA