| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is proB
Identifier: 103487700
GI number: 103487700
Start: 2329466
End: 2330572
Strand: Direct
Name: proB
Synonym: Sala_2219
Alternate gene names: 103487700
Gene position: 2329466-2330572 (Clockwise)
Preceding gene: 103487697
Following gene: 103487701
Centisome position: 69.64
GC content: 72.27
Gene sequence:
>1107_bases ATGAGCCTGTTTCCGCCCGCCTCCTGCCCGCGACTGATCGTCAAGATCGGGTCGGCGCTGCTCGTCGATCCGGGCGGCGC GGTGCGGCGCGACTGGCTCACAGGCATCGCCGCCGACATCGCGGAACGCGCCCGCGCCGGGCAACAGGTCGCGGTCGTCT CGTCGGGTGCGATCGCGCTCGGCGCGCGGCGGCTGGGGCTTGCCAAGGGCGGCCGCGCGAGCCTCGAAGATGCACAGGCG GCCGCCGCGACGGGGCAGATCGCGCTCAGCCAGGTGTGGGCCGAGGTGCTCGGCGCCGAGGGGCTGACGGCGGCACAGAT GCTTGTGACGCTCGGTGACCTCGAACATCGGCGCCGCTACCTCAACGCCGCGGCGACGCTCGATCGCCTGCTCAGCCTGG GCGTCGTCCCGATCATCAACGAGAATGACAGCGTCGCGACCGAGGAAATCCGCTTCGGCGACAACGACCGGCTCGCCGCG CGCGTCGCGCAGGCCGCCGCGGCGCGCGGCGTCATCCTTCTCTCTGACATCGACGGACTCTACGACCGCAACCCGGCGCA ACCGGGCGCCGTACATATCGAGCGAATCGAGCGGATTGACGCAGCGATCGAAGCGATGGCCGACACGGGGTCCGCATCGG GCATGGGATCGGGCGGCATGGTGTCGAAAATCGCCGCCGCGCGCATCGCCAACGCCGCGGGCGCGCATCTGGCCATCGCT TCGGGTCGGATCGACCGTCCGCTGTCGACCGCGGCGCGGCACAGCCTGTTCGTCGCCGAGCGCGGCGCGAGCGCGCGCAA GGCGTGGCTCGCGGGCGGGCTGACCGCCGAAGGGCGGCTGACGATCGACGCGGGCGCGGTCAAGGCGCTGGTGGGCGGCG CGAGCCTGCTCGCCGCCGGGGTAACTGCGGTATCAGGCAGCTTCGCGCGCGGCGACATCCTCGATATCGTCGGACCCGAC GGGCGCGTCGTCGCGCGCGGCCTGTCCGAATATCCTGCGGCCGATGCGGCTGCAATCGTCGGGCTCGGCCGCGACGCGCA GGAGGCCGCGCTCGGCTATGCGCCGCGCAGCGCCATCGTCCACCGCGACCATATGGTGCTGCTGTGA
Upstream 100 bases:
>100_bases GGCAAACCTATGGGACCGCGCCGCGCGCGTCCAGCGGCGGCGCGCGGGGCAAACGACATTCGCATTGGCGCGCGGGCGTC GCCGCGCTATCGGCGGCGGC
Downstream 100 bases:
>100_bases TCCTCCCCTGCAAGGGGAGGGGGACCACCCGGAGGGTGGTGGAGGGGCACGCGCAGCCAAATGCGGCGTTCGACCTCCTG CGCCCCTCCCCCATGCTTCG
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSLFPPASCPRLIVKIGSALLVDPGGAVRRDWLTGIAADIAERARAGQQVAVVSSGAIALGARRLGLAKGGRASLEDAQA AAATGQIALSQVWAEVLGAEGLTAAQMLVTLGDLEHRRRYLNAAATLDRLLSLGVVPIINENDSVATEEIRFGDNDRLAA RVAQAAAARGVILLSDIDGLYDRNPAQPGAVHIERIERIDAAIEAMADTGSASGMGSGGMVSKIAAARIANAAGAHLAIA SGRIDRPLSTAARHSLFVAERGASARKAWLAGGLTAEGRLTIDAGAVKALVGGASLLAAGVTAVSGSFARGDILDIVGPD GRVVARGLSEYPAADAAAIVGLGRDAQEAALGYAPRSAIVHRDHMVLL
Sequences:
>Translated_368_residues MSLFPPASCPRLIVKIGSALLVDPGGAVRRDWLTGIAADIAERARAGQQVAVVSSGAIALGARRLGLAKGGRASLEDAQA AAATGQIALSQVWAEVLGAEGLTAAQMLVTLGDLEHRRRYLNAAATLDRLLSLGVVPIINENDSVATEEIRFGDNDRLAA RVAQAAAARGVILLSDIDGLYDRNPAQPGAVHIERIERIDAAIEAMADTGSASGMGSGGMVSKIAAARIANAAGAHLAIA SGRIDRPLSTAARHSLFVAERGASARKAWLAGGLTAEGRLTIDAGAVKALVGGASLLAAGVTAVSGSFARGDILDIVGPD GRVVARGLSEYPAADAAAIVGLGRDAQEAALGYAPRSAIVHRDHMVLL >Mature_367_residues SLFPPASCPRLIVKIGSALLVDPGGAVRRDWLTGIAADIAERARAGQQVAVVSSGAIALGARRLGLAKGGRASLEDAQAA AATGQIALSQVWAEVLGAEGLTAAQMLVTLGDLEHRRRYLNAAATLDRLLSLGVVPIINENDSVATEEIRFGDNDRLAAR VAQAAAARGVILLSDIDGLYDRNPAQPGAVHIERIERIDAAIEAMADTGSASGMGSGGMVSKIAAARIANAAGAHLAIAS GRIDRPLSTAARHSLFVAERGASARKAWLAGGLTAEGRLTIDAGAVKALVGGASLLAAGVTAVSGSFARGDILDIVGPDG RVVARGLSEYPAADAAAIVGLGRDAQEAALGYAPRSAIVHRDHMVLL
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain
Homologues:
Organism=Homo sapiens, GI62912457, Length=264, Percent_Identity=32.5757575757576, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI21361368, Length=266, Percent_Identity=32.3308270676692, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1786437, Length=362, Percent_Identity=38.121546961326, Blast_Score=200, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17569969, Length=250, Percent_Identity=33.2, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17569967, Length=250, Percent_Identity=33.2, Blast_Score=113, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6320506, Length=417, Percent_Identity=31.4148681055156, Blast_Score=170, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6321822, Length=414, Percent_Identity=28.9855072463768, Blast_Score=151, Evalue=2e-37, Organism=Drosophila melanogaster, GI21357643, Length=274, Percent_Identity=32.8467153284672, Blast_Score=111, Evalue=7e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROB_SPHAL (Q1GQZ4)
Other databases:
- EMBL: CP000356 - RefSeq: YP_617261.1 - ProteinModelPortal: Q1GQZ4 - SMR: Q1GQZ4 - GeneID: 4080290 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_2219 - HOGENOM: HBG507643 - OMA: TFGDNDM - ProtClustDB: PRK05429 - BioCyc: SALA317655:SALA_2219-MONOMER - BRENDA: 2.7.2.11 - GO: GO:0005737 - HAMAP: MF_00456 - InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000729 - PRINTS: PR00474 - SMART: SM00359 - TIGRFAMs: TIGR01027
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA; SSF53633 Aa_kinase; SSF88697 PUA-like
EC number: =2.7.2.11
Molecular weight: Translated: 37406; Mature: 37275
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00902 GLUTAMATE_5_KINASE; PS50890 PUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFPPASCPRLIVKIGSALLVDPGGAVRRDWLTGIAADIAERARAGQQVAVVSSGAIAL CCCCCCCCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEE GARRLGLAKGGRASLEDAQAAAATGQIALSQVWAEVLGAEGLTAAQMLVTLGDLEHRRRY CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LNAAATLDRLLSLGVVPIINENDSVATEEIRFGDNDRLAARVAQAAAARGVILLSDIDGL HHHHHHHHHHHHCCCEEEECCCCCCCHHHEECCCCHHHHHHHHHHHHHCCEEEEECCCCH YDRNPAQPGAVHIERIERIDAAIEAMADTGSASGMGSGGMVSKIAAARIANAAGAHLAIA HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE SGRIDRPLSTAARHSLFVAERGASARKAWLAGGLTAEGRLTIDAGAVKALVGGASLLAAG CCCCCCCHHHHHHHHEEEECCCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH VTAVSGSFARGDILDIVGPDGRVVARGLSEYPAADAAAIVGLGRDAQEAALGYAPRSAIV HHHHCCCCCCCCEEEEECCCCHHHHCCHHHCCCCCHHHHEECCCCHHHHHHCCCCCHHHE HRDHMVLL ECCCEEEC >Mature Secondary Structure SLFPPASCPRLIVKIGSALLVDPGGAVRRDWLTGIAADIAERARAGQQVAVVSSGAIAL CCCCCCCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEE GARRLGLAKGGRASLEDAQAAAATGQIALSQVWAEVLGAEGLTAAQMLVTLGDLEHRRRY CHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LNAAATLDRLLSLGVVPIINENDSVATEEIRFGDNDRLAARVAQAAAARGVILLSDIDGL HHHHHHHHHHHHCCCEEEECCCCCCCHHHEECCCCHHHHHHHHHHHHHCCEEEEECCCCH YDRNPAQPGAVHIERIERIDAAIEAMADTGSASGMGSGGMVSKIAAARIANAAGAHLAIA HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE SGRIDRPLSTAARHSLFVAERGASARKAWLAGGLTAEGRLTIDAGAVKALVGGASLLAAG CCCCCCCHHHHHHHHEEEECCCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH VTAVSGSFARGDILDIVGPDGRVVARGLSEYPAADAAAIVGLGRDAQEAALGYAPRSAIV HHHHCCCCCCCCEEEEECCCCHHHHCCHHHCCCCCHHHHEECCCCHHHHHHCCCCCHHHE HRDHMVLL ECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA