Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487701

Identifier: 103487701

GI number: 103487701

Start: 2330709

End: 2331629

Strand: Direct

Name: 103487701

Synonym: Sala_2220

Alternate gene names: NA

Gene position: 2330709-2331629 (Clockwise)

Preceding gene: 103487700

Following gene: 103487702

Centisome position: 69.67

GC content: 72.42

Gene sequence:

>921_bases
ATGACGCACCGCACCCTCGCCATGACCGGCGCAACCGGCTTTGTCGGCGGCGCGACGCTGCACCGCGCCGTCGAGGCGGG
CTGGCACGTCCGCGCGCTGACACGCCGCCCGCAGGGCGAACGCGAGGGCGTAACCTGGATCGCCGGCGCGCTCGACAAGC
CCGACAGCCTCGCCGACATGGTGGCGGGGGCCGATGTCGTCATGCACATCGCGGGCGTCGTCAATGTCCCGACCCGCGCC
GCCTTCGAGGCGGGCAATGCGACCGCAACCGCCAATGTGATCGCCGCCGCACGCGATGCCCATATATCGCGCTTCGTCCA
CGTCTCCTCGCTCGCGGCGCGCGAGCCAGGCCTTTCCGACTATGGCTGGTCGAAGGAGCGCGCCGAGGCCGTCGTGCAGG
CGAGCGGGCTCGACTGGACGATCGTGCGCCCGCCTGCGGTGTTCGGCCCCGGCGATACCGAGATGCTCGACCTGTTCCGC
ATGGTTCGCCGGGGCGTCGCCCTCCTGCCACCGCCGGGCCGCATGTCGGCGATCTATGTCGACGACCTTGCCCGCCTGCT
CGTTGTGCTCGCAGCCGACAAGGGGACGAGTTTCGGCCGGATCTATGAGCCCGACGACGGCACCCCCGGCGGCTGGTCGC
ACCGCGGCTTTGCCCGCGCGATCGGGCGGGCGGTCGGCCGCGCCCATGTGCCGACGCTCGCCGCGCCGGCGCTGCTGCTC
AAGGTCGGCGGGCGGATCGACCGGTTCATCCGCCGCGACCGCGCCAAGCTGACCCCCGACCGTGCGCGCTATATCGTGCA
TCCCGACTGGGTGGTGGCCGATGGCGCCCGTCCGCCCGCCACAATCTGGCGCCCGGAGCGCGAGACCGACGAGGCGCTCG
CCGAAACGGCGCGCTGGTATCGCCGCGAAGGCTGGCTCTGA

Upstream 100 bases:

>100_bases
TGGTGGAGGGGCACGCGCAGCCAAATGCGGCGTTCGACCTCCTGCGCCCCTCCCCCATGCTTCGCATGGCGCCCCTCCCC
GTACCGGGGAAGAACGTCTT

Downstream 100 bases:

>100_bases
CCCGTAATCCCGACCCAAGCAGCTCACCACAATCGTCATCCCGGCGAAGGCCGGGATGACAGATTGAGGGAATACCGACC
GCCCATGCGCTCCCATCGCC

Product: Male sterility-like protein

Products: NA

Alternate protein names: NADH-Ubiquinone Oxidoreductase; Epimerase; Male Sterility-Like Protein; Oxidoreductase; UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTHRTLAMTGATGFVGGATLHRAVEAGWHVRALTRRPQGEREGVTWIAGALDKPDSLADMVAGADVVMHIAGVVNVPTRA
AFEAGNATATANVIAAARDAHISRFVHVSSLAAREPGLSDYGWSKERAEAVVQASGLDWTIVRPPAVFGPGDTEMLDLFR
MVRRGVALLPPPGRMSAIYVDDLARLLVVLAADKGTSFGRIYEPDDGTPGGWSHRGFARAIGRAVGRAHVPTLAAPALLL
KVGGRIDRFIRRDRAKLTPDRARYIVHPDWVVADGARPPATIWRPERETDEALAETARWYRREGWL

Sequences:

>Translated_306_residues
MTHRTLAMTGATGFVGGATLHRAVEAGWHVRALTRRPQGEREGVTWIAGALDKPDSLADMVAGADVVMHIAGVVNVPTRA
AFEAGNATATANVIAAARDAHISRFVHVSSLAAREPGLSDYGWSKERAEAVVQASGLDWTIVRPPAVFGPGDTEMLDLFR
MVRRGVALLPPPGRMSAIYVDDLARLLVVLAADKGTSFGRIYEPDDGTPGGWSHRGFARAIGRAVGRAHVPTLAAPALLL
KVGGRIDRFIRRDRAKLTPDRARYIVHPDWVVADGARPPATIWRPERETDEALAETARWYRREGWL
>Mature_305_residues
THRTLAMTGATGFVGGATLHRAVEAGWHVRALTRRPQGEREGVTWIAGALDKPDSLADMVAGADVVMHIAGVVNVPTRAA
FEAGNATATANVIAAARDAHISRFVHVSSLAAREPGLSDYGWSKERAEAVVQASGLDWTIVRPPAVFGPGDTEMLDLFRM
VRRGVALLPPPGRMSAIYVDDLARLLVVLAADKGTSFGRIYEPDDGTPGGWSHRGFARAIGRAVGRAHVPTLAAPALLLK
VGGRIDRFIRRDRAKLTPDRARYIVHPDWVVADGARPPATIWRPERETDEALAETARWYRREGWL

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33152; Mature: 33021

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHRTLAMTGATGFVGGATLHRAVEAGWHVRALTRRPQGEREGVTWIAGALDKPDSLADM
CCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEHHCCCCCCCCCCEEEECCCCCCHHHHHH
VAGADVVMHIAGVVNVPTRAAFEAGNATATANVIAAARDAHISRFVHVSSLAAREPGLSD
HHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YGWSKERAEAVVQASGLDWTIVRPPAVFGPGDTEMLDLFRMVRRGVALLPPPGRMSAIYV
CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCEEEEHH
DDLARLLVVLAADKGTSFGRIYEPDDGTPGGWSHRGFARAIGRAVGRAHVPTLAAPALLL
HHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
KVGGRIDRFIRRDRAKLTPDRARYIVHPDWVVADGARPPATIWRPERETDEALAETARWY
HHCCHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
RREGWL
HHCCCC
>Mature Secondary Structure 
THRTLAMTGATGFVGGATLHRAVEAGWHVRALTRRPQGEREGVTWIAGALDKPDSLADM
CCCEEEEECCCCCCCHHHHHHHHHCCCEEEEHHCCCCCCCCCCEEEECCCCCCHHHHHH
VAGADVVMHIAGVVNVPTRAAFEAGNATATANVIAAARDAHISRFVHVSSLAAREPGLSD
HHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YGWSKERAEAVVQASGLDWTIVRPPAVFGPGDTEMLDLFRMVRRGVALLPPPGRMSAIYV
CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCEEEEHH
DDLARLLVVLAADKGTSFGRIYEPDDGTPGGWSHRGFARAIGRAVGRAHVPTLAAPALLL
HHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
KVGGRIDRFIRRDRAKLTPDRARYIVHPDWVVADGARPPATIWRPERETDEALAETARWY
HHCCHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
RREGWL
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA