The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is yeiB [H]

Identifier: 103487682

GI number: 103487682

Start: 2312828

End: 2314078

Strand: Direct

Name: yeiB [H]

Synonym: Sala_2201

Alternate gene names: 103487682

Gene position: 2312828-2314078 (Clockwise)

Preceding gene: 103487681

Following gene: 103487688

Centisome position: 69.14

GC content: 63.55

Gene sequence:

>1251_bases
ATGAACCGGGGAACCACGACGCGCTACGAAAGCCTCGACGCGATCCGCGGGGTCGCGGTGATGGGCATCCTTGCGATGAA
CATCGTCGCCTTTGCCCTGCCCTTCCCCGCCTATGGCAACCCCGCCGCGGGCGGACCGCCCACCGACAGCGACGTCGCGA
CATGGTTCTTCAACTTCGTTTTCGTGGATTCGAAGATGCGCGGCATGTTTTCGATGCTGTTCGGGGCGAGCACCCTGCTG
GTGATCGAAAGCGCCGCCGTCGCGGGACGCAGCGGCGCGGGCGCGCATTATTCGCGCATGTTCTGGCTCGCGATCTTCGG
CCTCGCGCATTTCTATCTCATCTGGTTCGGCGACATATTGTTCCTTTATGCAATCTGCGGGCTGCTCATCTTCCTGTTCC
GCAACCTGTCGGTGCGTGCGCTCCTGCTCTGGGCGATCCCCTTTTTCCTCATCGCTATCGGTCTGCACACGAGCCTCTGG
GCGATGATGTCGATGGCACAGGCGGGAACGCTGCCGCCCGAAGCGGCCACCGCGATGCAGGAGGCGCTGCGGCAGATGAA
CGCCGATATGGGCCCGTCCACCCCCGTCTATGCCGAAGAGAAGGCGCTCTATCTCGGCAGCTATGCCAGCATCGTCGCAT
ATCGCACCGGCGCGATGGCGGGCGATCCGCTCTTCTTCCTCGGCCTGTTCCTGTGGGAAACGGTGGGGCTGATGCTGATC
GGCATGGCGCTGTTCAAATCGCATATGCTGACCGGCGAATGGGAGGCGGCGCGCTATCGCAAATGGGCGATCGCCTGTTT
TGCGATCGCCGTGCCGCCGCTCGTCGGGCTCGCCCTCTATCAGATGCGAACGGGTTATGACGCGGTATCGGTCTTCGGTT
CGACGATCGCGCTGTCGGTGCCCTTCGACACGCTGATGACGATCGGCTGGGCGGCGCTCATCATGCTGCTGGTCAAGACA
GCGGCCAGCCACGCCCTGCGCGCGCGGCTCGCGGCGGCGGGGCGCATGGCCTTCACCAATTATCTCGTCACCTCGATCGT
GATGACGACGATATTTTACGGCTATGGGCTCGGCCTCTTCGGCAGCATCGGCCGCCTGCCGCTCTATCTTTTCTGCATCG
GCATGTGGGCGGCGATGCTGCTGTGGTCAAAGCCCTGGCTCGACCGTTTTCAATATGGCCCGCTCGAGTGGCTGTGGCGC
AGCCTGTCGCGCGGGCAGGTGCAGCCGATGCGAAAACGCTTGCCGGGCTGA

Upstream 100 bases:

>100_bases
GCGCCCGACGCCACGGTGCCCGTTCACGCGACGCGCAAAAAACCGCTGGACCGGATCAGCAGCTGGCTCTGACGCTGCGC
GGCACTTGGAGGAAAAGGCG

Downstream 100 bases:

>100_bases
AACGGCGCGTCGGTCAGTAACCGACGGCGCGACCGAAAGTGGCGGGGCGGCGCTGGACCAGCGGATTGGCCTCGCGCTCC
AGCGCGGCGAGCGTTTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MNRGTTTRYESLDAIRGVAVMGILAMNIVAFALPFPAYGNPAAGGPPTDSDVATWFFNFVFVDSKMRGMFSMLFGASTLL
VIESAAVAGRSGAGAHYSRMFWLAIFGLAHFYLIWFGDILFLYAICGLLIFLFRNLSVRALLLWAIPFFLIAIGLHTSLW
AMMSMAQAGTLPPEAATAMQEALRQMNADMGPSTPVYAEEKALYLGSYASIVAYRTGAMAGDPLFFLGLFLWETVGLMLI
GMALFKSHMLTGEWEAARYRKWAIACFAIAVPPLVGLALYQMRTGYDAVSVFGSTIALSVPFDTLMTIGWAALIMLLVKT
AASHALRARLAAAGRMAFTNYLVTSIVMTTIFYGYGLGLFGSIGRLPLYLFCIGMWAAMLLWSKPWLDRFQYGPLEWLWR
SLSRGQVQPMRKRLPG

Sequences:

>Translated_416_residues
MNRGTTTRYESLDAIRGVAVMGILAMNIVAFALPFPAYGNPAAGGPPTDSDVATWFFNFVFVDSKMRGMFSMLFGASTLL
VIESAAVAGRSGAGAHYSRMFWLAIFGLAHFYLIWFGDILFLYAICGLLIFLFRNLSVRALLLWAIPFFLIAIGLHTSLW
AMMSMAQAGTLPPEAATAMQEALRQMNADMGPSTPVYAEEKALYLGSYASIVAYRTGAMAGDPLFFLGLFLWETVGLMLI
GMALFKSHMLTGEWEAARYRKWAIACFAIAVPPLVGLALYQMRTGYDAVSVFGSTIALSVPFDTLMTIGWAALIMLLVKT
AASHALRARLAAAGRMAFTNYLVTSIVMTTIFYGYGLGLFGSIGRLPLYLFCIGMWAAMLLWSKPWLDRFQYGPLEWLWR
SLSRGQVQPMRKRLPG
>Mature_416_residues
MNRGTTTRYESLDAIRGVAVMGILAMNIVAFALPFPAYGNPAAGGPPTDSDVATWFFNFVFVDSKMRGMFSMLFGASTLL
VIESAAVAGRSGAGAHYSRMFWLAIFGLAHFYLIWFGDILFLYAICGLLIFLFRNLSVRALLLWAIPFFLIAIGLHTSLW
AMMSMAQAGTLPPEAATAMQEALRQMNADMGPSTPVYAEEKALYLGSYASIVAYRTGAMAGDPLFFLGLFLWETVGLMLI
GMALFKSHMLTGEWEAARYRKWAIACFAIAVPPLVGLALYQMRTGYDAVSVFGSTIALSVPFDTLMTIGWAALIMLLVKT
AASHALRARLAAAGRMAFTNYLVTSIVMTTIFYGYGLGLFGSIGRLPLYLFCIGMWAAMLLWSKPWLDRFQYGPLEWLWR
SLSRGQVQPMRKRLPG

Specific function: Involved in transport (Potential) [H]

COG id: COG2311

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yxaH and yrkO [H]

Homologues:

Organism=Escherichia coli, GI1788475, Length=403, Percent_Identity=32.7543424317618, Blast_Score=145, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007349 [H]

Pfam domain/function: PF04235 DUF418 [H]

EC number: NA

Molecular weight: Translated: 45814; Mature: 45814

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS01353 HEMATOPO_REC_L_F2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 1619663 [H]