| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is coaD
Identifier: 103487674
GI number: 103487674
Start: 2305319
End: 2305825
Strand: Reverse
Name: coaD
Synonym: Sala_2193
Alternate gene names: 103487674
Gene position: 2305825-2305319 (Counterclockwise)
Preceding gene: 103487675
Following gene: 103487673
Centisome position: 68.93
GC content: 60.95
Gene sequence:
>507_bases ATGCGGGTGGGGGTTTATCCGGGGACGTTCGATCCGATCACGCTTGGCCATATGGACATCATCCGGCGCGGCGCGAAGCT CGTCGACCGGCTGGTGATCGGGGTGACAACCAATATCACCAAGTCGCCGCTGTTCGACGACGACGAACGCATCGCGATGG TGAAGCGCGAGGTCGCCGCGATCGAAGGCGACATTCAGGTCGTTGGGTTCAATTCGCTGCTGATGGATTTTGCCCAGCGC GAAGGCGCGACGGTCATCGTCCGCGGGCTGCGCGCGGTCGCCGATTTCGAATATGAATATCAGATGGCCGGCATGAACCA GCAACTCAACGACCGCATCGAAACCGTCTTTCTGATGGCCGATGTCGGCTTGCAGCCGATCGCGTCGCGATTGGTCAAGG AAATCGCGATCTTCGGCGGCGAGATCCACAAATTCGTGACACCGGCCGTCTGCAAGGCGGTCATCGCGCGCATTGCCGAA CGGGGATTGCGCCAGGGCGAGCGTTGA
Upstream 100 bases:
>100_bases CGCTGCTCGTCGAACAGGCGATCGCTCATCTCGGCGGCTTCGGCGACGAAGCCGCGCTGCTCCGCGCGATCGCGCGCTAT GTCGTGGAAAGGGACCGGTA
Downstream 100 bases:
>100_bases GGCCAATCATTGAGCGTTCATATTTTTCCCGCTAGGGGACGCCCGACGGGGCGCAATTCCGATTATCCAAGAGGCCGATC CAGCATGACATTTTTTTTCC
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MRVGVYPGTFDPITLGHMDIIRRGAKLVDRLVIGVTTNITKSPLFDDDERIAMVKREVAAIEGDIQVVGFNSLLMDFAQR EGATVIVRGLRAVADFEYEYQMAGMNQQLNDRIETVFLMADVGLQPIASRLVKEIAIFGGEIHKFVTPAVCKAVIARIAE RGLRQGER
Sequences:
>Translated_168_residues MRVGVYPGTFDPITLGHMDIIRRGAKLVDRLVIGVTTNITKSPLFDDDERIAMVKREVAAIEGDIQVVGFNSLLMDFAQR EGATVIVRGLRAVADFEYEYQMAGMNQQLNDRIETVFLMADVGLQPIASRLVKEIAIFGGEIHKFVTPAVCKAVIARIAE RGLRQGER >Mature_168_residues MRVGVYPGTFDPITLGHMDIIRRGAKLVDRLVIGVTTNITKSPLFDDDERIAMVKREVAAIEGDIQVVGFNSLLMDFAQR EGATVIVRGLRAVADFEYEYQMAGMNQQLNDRIETVFLMADVGLQPIASRLVKEIAIFGGEIHKFVTPAVCKAVIARIAE RGLRQGER
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family
Homologues:
Organism=Escherichia coli, GI1790065, Length=156, Percent_Identity=43.5897435897436, Blast_Score=150, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_SPHAL (Q1GR20)
Other databases:
- EMBL: CP000356 - RefSeq: YP_617235.1 - ProteinModelPortal: Q1GR20 - SMR: Q1GR20 - GeneID: 4080227 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_2193 - NMPDR: fig|317655.9.peg.2122 - HOGENOM: HBG288308 - OMA: VRQIAAM - ProtClustDB: PRK00168 - BioCyc: SALA317655:SALA_2193-MONOMER - GO: GO:0005737 - HAMAP: MF_00151 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01020 - TIGRFAMs: TIGR01510 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 18634; Mature: 18634
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGVYPGTFDPITLGHMDIIRRGAKLVDRLVIGVTTNITKSPLFDDDERIAMVKREVAA CEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH IEGDIQVVGFNSLLMDFAQREGATVIVRGLRAVADFEYEYQMAGMNQQLNDRIETVFLMA HCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHH DVGLQPIASRLVKEIAIFGGEIHKFVTPAVCKAVIARIAERGLRQGER HCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRVGVYPGTFDPITLGHMDIIRRGAKLVDRLVIGVTTNITKSPLFDDDERIAMVKREVAA CEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH IEGDIQVVGFNSLLMDFAQREGATVIVRGLRAVADFEYEYQMAGMNQQLNDRIETVFLMA HCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHH DVGLQPIASRLVKEIAIFGGEIHKFVTPAVCKAVIARIAERGLRQGER HCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA