Click here to switch to the map view.

The map label for this gene is yibF [H]

Identifier: 103487569

GI number: 103487569

Start: 2193000

End: 2193650

Strand: Reverse

Name: yibF [H]

Synonym: Sala_2088

Alternate gene names: 103487569

Gene position: 2193650-2193000 (Counterclockwise)

Preceding gene: 103487573

Following gene: 103487565

Centisome position: 65.58

GC content: 66.05

Gene sequence:

>651_bases
ATGATTGTTTATGGTTCGATCGTGTCGCCCTTCGTACGCAAACTGCTCGCCTATCTGGGCGAAAAGGGGATCGATTTCGA
GCTGAAGGGCGTCGGCCTGGGCGATCCCGATCCGGGGTTCAAGGCCGCCTCGCCGCTCGGCAAGATGCCCGCGATCGACG
ACGATGGTTTCCTGCTCGCCGATTCGAGCGCGATCATCCATTATCTGGAGGCGAAGCATCCCGAACCAGCGCTGATCCCC
GCCGACCCCCGCGAGCGCGGGCAGGTCATCTGGTGGGAGGAGTTCGCCGACACGGTGTTCGCGGCGTGCGGCGGCAAGAT
GTTCTTCAACCGCATCGTCGCGCCCAAGTTCCTCGGCCGCGACGGCGACCTGGCCGCCGCCGCGGCGGCCGAGGCGGAGG
AGCTGCCCAAGCTGCTCGACTATCTGGAGGGCGCGATCCCCGCATCGGGCTTCCTCGTCGGCGACCGGCTGACGCTCGCC
GACCTCGCGGTCGCGTCGCCGCTGATCAACCTGCGCCATTGCGGATCGTGCATCGACGCGGCCAGGCATCCGAAGATTGC
GGCGTGGAGCGAAGCGATATTGTCGCGGCCGAGCATGGCGCCGTGGATCGCCAAGGAAGAGCGGATGATGGCGAAGGTTT
TGGGTGGGTGA

Upstream 100 bases:

>100_bases
CGATGGCAAGTTTATTTCATACCATAACGGCGATGCCTGACGGGTTGCGAATCGCAACCCCTGGCCTATGCTCGCGCCAC
TTTCGCAGAAAGGATTTGTG

Downstream 100 bases:

>100_bases
GGGGGCGGCGCTCTTGAGGCTATCCGACGGGTGACTTGGGCGTTAAGTAAACATTCATGTCTGGACGGCGCCGTAAGGGG
CGATCATGCGACGGCTTGCA

Product: glutathione S-transferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MIVYGSIVSPFVRKLLAYLGEKGIDFELKGVGLGDPDPGFKAASPLGKMPAIDDDGFLLADSSAIIHYLEAKHPEPALIP
ADPRERGQVIWWEEFADTVFAACGGKMFFNRIVAPKFLGRDGDLAAAAAAEAEELPKLLDYLEGAIPASGFLVGDRLTLA
DLAVASPLINLRHCGSCIDAARHPKIAAWSEAILSRPSMAPWIAKEERMMAKVLGG

Sequences:

>Translated_216_residues
MIVYGSIVSPFVRKLLAYLGEKGIDFELKGVGLGDPDPGFKAASPLGKMPAIDDDGFLLADSSAIIHYLEAKHPEPALIP
ADPRERGQVIWWEEFADTVFAACGGKMFFNRIVAPKFLGRDGDLAAAAAAEAEELPKLLDYLEGAIPASGFLVGDRLTLA
DLAVASPLINLRHCGSCIDAARHPKIAAWSEAILSRPSMAPWIAKEERMMAKVLGG
>Mature_216_residues
MIVYGSIVSPFVRKLLAYLGEKGIDFELKGVGLGDPDPGFKAASPLGKMPAIDDDGFLLADSSAIIHYLEAKHPEPALIP
ADPRERGQVIWWEEFADTVFAACGGKMFFNRIVAPKFLGRDGDLAAAAAAEAEELPKLLDYLEGAIPASGFLVGDRLTLA
DLAVASPLINLRHCGSCIDAARHPKIAAWSEAILSRPSMAPWIAKEERMMAKVLGG

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790018, Length=205, Percent_Identity=33.1707317073171, Blast_Score=80, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17533777, Length=206, Percent_Identity=29.6116504854369, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17537491, Length=168, Percent_Identity=31.547619047619, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24654975, Length=202, Percent_Identity=32.1782178217822, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI21355857, Length=177, Percent_Identity=29.3785310734463, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI19922532, Length=201, Percent_Identity=25.3731343283582, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI20130115, Length=201, Percent_Identity=26.3681592039801, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24654979, Length=200, Percent_Identity=27.5, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 23128; Mature: 23128

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVYGSIVSPFVRKLLAYLGEKGIDFELKGVGLGDPDPGFKAASPLGKMPAIDDDGFLLA
CEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
DSSAIIHYLEAKHPEPALIPADPRERGQVIWWEEFADTVFAACGGKMFFNRIVAPKFLGR
CCHHHHHHHHCCCCCCCCCCCCHHHCCCEEEHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
DGDLAAAAAAEAEELPKLLDYLEGAIPASGFLVGDRLTLADLAVASPLINLRHCGSCIDA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
ARHPKIAAWSEAILSRPSMAPWIAKEERMMAKVLGG
HCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVYGSIVSPFVRKLLAYLGEKGIDFELKGVGLGDPDPGFKAASPLGKMPAIDDDGFLLA
CEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
DSSAIIHYLEAKHPEPALIPADPRERGQVIWWEEFADTVFAACGGKMFFNRIVAPKFLGR
CCHHHHHHHHCCCCCCCCCCCCHHHCCCEEEHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
DGDLAAAAAAEAEELPKLLDYLEGAIPASGFLVGDRLTLADLAVASPLINLRHCGSCIDA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
ARHPKIAAWSEAILSRPSMAPWIAKEERMMAKVLGG
HCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]