| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487476
Identifier: 103487476
GI number: 103487476
Start: 2104129
End: 2104704
Strand: Reverse
Name: 103487476
Synonym: Sala_1993
Alternate gene names: NA
Gene position: 2104704-2104129 (Counterclockwise)
Preceding gene: 103487477
Following gene: 103487475
Centisome position: 62.92
GC content: 75.87
Gene sequence:
>576_bases ATGGATGAGATCGACGAGATGGTCGTCGCGGTGCGCGCCGACACGGGGGCGTTCCGGCGCGACATTGCCGCGCTGCGCGC GGAGCTGCGCGGGCCGCTGGTCGCCGGCGCCGAGGAGGCGGGAAATGCGATCGAGCGGGCGCTGTCGCGCGCGATCACCA CCGGCAAGCTGGGGTTCGAGGATCTGAAGCGGCTGGCGCTGTCGGTGATGGCCGACATTGCGCGTGCAGCGATTTCGGGC GGGCTGGGGGCGGCGCTGGGCGGCGGCGGGGCGAGCGGGGGCGGCGGGCTTCTGTCGCTTGGTTCGTCGATCGCGATGGC GCTGTTCGGGGCGCCGGGGCGCGCGACGGGCGGGCCGGTGAGCGCGGGGCGCGCCTATCGCGTCGGCGAGCGCGGACCCG AGCTGTTCGTGCCGACCGCGAGCGGGCGGATCGAGGCGGCGGGCGGGGCGACGCGGCATATCGCGATCACGGTGAATGTG CAGGGGCCGGCGGGCAATGATCCGCAGCGGCTGGCGCAGACGGGGCGGCAACTGGCGCGCGCGGTGCGGCGCGCGGTGGC GGCGGGGGAGGACTGA
Upstream 100 bases:
>100_bases CCCGCCGATGTGCGCGCGGTGCTGGCGGGGTGGATCGACGCGGGCGATGCTGCCCGGTTCGACCGCGCGGCGCTGAGCGC GATGATGGAGCAATTTCCCG
Downstream 100 bases:
>100_bases TGGGCTGGGCCCTGGTGGCGGCGGCCGAGCCGCATCATCGCAAGGGGTGGATCAAGCGGTTCGACCCGCGCTTCTGGACG GTCGATTTTGCGCGGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MDEIDEMVVAVRADTGAFRRDIAALRAELRGPLVAGAEEAGNAIERALSRAITTGKLGFEDLKRLALSVMADIARAAISG GLGAALGGGGASGGGGLLSLGSSIAMALFGAPGRATGGPVSAGRAYRVGERGPELFVPTASGRIEAAGGATRHIAITVNV QGPAGNDPQRLAQTGRQLARAVRRAVAAGED
Sequences:
>Translated_191_residues MDEIDEMVVAVRADTGAFRRDIAALRAELRGPLVAGAEEAGNAIERALSRAITTGKLGFEDLKRLALSVMADIARAAISG GLGAALGGGGASGGGGLLSLGSSIAMALFGAPGRATGGPVSAGRAYRVGERGPELFVPTASGRIEAAGGATRHIAITVNV QGPAGNDPQRLAQTGRQLARAVRRAVAAGED >Mature_191_residues MDEIDEMVVAVRADTGAFRRDIAALRAELRGPLVAGAEEAGNAIERALSRAITTGKLGFEDLKRLALSVMADIARAAISG GLGAALGGGGASGGGGLLSLGSSIAMALFGAPGRATGGPVSAGRAYRVGERGPELFVPTASGRIEAAGGATRHIAITVNV QGPAGNDPQRLAQTGRQLARAVRRAVAAGED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19052; Mature: 19052
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEIDEMVVAVRADTGAFRRDIAALRAELRGPLVAGAEEAGNAIERALSRAITTGKLGFE CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHCCCCCHH DLKRLALSVMADIARAAISGGLGAALGGGGASGGGGLLSLGSSIAMALFGAPGRATGGPV HHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC SAGRAYRVGERGPELFVPTASGRIEAAGGATRHIAITVNVQGPAGNDPQRLAQTGRQLAR CCCCEEECCCCCCEEEEECCCCEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHH AVRRAVAAGED HHHHHHHCCCC >Mature Secondary Structure MDEIDEMVVAVRADTGAFRRDIAALRAELRGPLVAGAEEAGNAIERALSRAITTGKLGFE CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHCCCCCHH DLKRLALSVMADIARAAISGGLGAALGGGGASGGGGLLSLGSSIAMALFGAPGRATGGPV HHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC SAGRAYRVGERGPELFVPTASGRIEAAGGATRHIAITVNVQGPAGNDPQRLAQTGRQLAR CCCCEEECCCCCCEEEEECCCCEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHH AVRRAVAAGED HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA