Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487475

Identifier: 103487475

GI number: 103487475

Start: 2101805

End: 2104129

Strand: Reverse

Name: 103487475

Synonym: Sala_1992

Alternate gene names: NA

Gene position: 2104129-2101805 (Counterclockwise)

Preceding gene: 103487476

Following gene: 103487474

Centisome position: 62.9

GC content: 71.05

Gene sequence:

>2325_bases
ATGGGCTGGGCCCTGGTGGCGGCGGCCGAGCCGCATCATCGCAAGGGGTGGATCAAGCGGTTCGACCCGCGCTTCTGGAC
GGTCGATTTTGCGCGGCCGATGATGGCGAGCGTGACGAGCGCGGCGCCGGGGGCGCTGCGCGTCGAGGCGGTCTTTTACC
GCAAGCAGGATCTGGCGGGGCTGATCTGGGAGACGGCGGACCGGTGGGATCACCCGCTGCTCGCCTATGAAACGCGGCGT
GATTTCCGGCACACGCAGCTCCTTTTCCGATGGCGGTCGGGCGGGGTGAAGCCGCTCGACGCGCTGCATGGCCCGACGCT
GACGATCGAGGGGCGCGATGCGGGAGGCAATCCGCGCGCCTGGTATGTGCGGTTGTGGAACTATGCCGAGGGGAGTGCGG
AGGATGCGGTGGTGACGCTCGATTTCGATGCGCTCGACGGCGGTTTCCTGCTTCCCGGCGAGGCGGATCCGGTGTGGGCG
GGGGATGTCGACAGGATGTTCGTTTCGCTGGTGCCGCCGACCTATGACGGCGGCGAGGGCGATTTGGATGCGCCGGTCGA
GGGCTGGGCCGAGATGAGCGACATCGTCTGCACCGGATCGGGTTCGGTGCTGGCGATCGGCGATGCGGTGCTCCCCGAAA
CGGCGCTGGGCATGACCAACGGCTATGACGATTGCTATCACCTGACCCCGGCGCGCGTGGTGCGGCAGATCGTGCAATTG
GGCTATCGCGGCGACGTCGTCCATTATGTCGGGATGAGCCATTATATGCGGCTGGCGCCGTCAGCCGCGGGCCTGCTCGC
GGATGCGTCGGCGGGCGCGTTGAACGGTCCGTGCGCGGCCTGGCATCGCGATTTGGCCGCCGCGTGCGCGGCGGCGGGGC
TGGGGCTGATCTGGTCGCTGTCCTATGAATTGTTCGACGCCTATTGCCCCGAGGACTGGAAGCAGCGCGACGCCGATGGC
GCGCCCGCGCTGACCGGGTGGGAGCCGCCCTCGACCCTGCTGTCGCCGGCGAATGCGGCGGCGATGGCCTGGTTGCAGGC
GGTCGCGCGGGCGTTCGTCGCGATCGGGCGCGATGCCGGGCTGGCGTGCAGGTTTCAGGTCGGCGAGCCCTGGTGGTGGA
TCGCGGACGGGGGGCGCATCTGCGCCTATGACGCGGCGGCGTCGGCGGCGCTGGGCGGCGCGGGCGTGGCGATTGCCGAC
GTGCGCGGGCCGCTCGACGCGGCGCAGCGGGCGATGCTCGATGCGCTGGGCGCCTTGCTCGCCGATTCGACCGCCGCGCT
GGTCGCGGCGGCGCGGGAGGAGGCGGGTGCGGCGGGGCTGGTCAGCCACTTGCTCGTCTATCTGCCGACGGTGCTCGACC
CGGCGGCGGCAGAGGTGCGGCGCGCCAATGTGCCGCTCGGCTGGGCGGCGCCGGCGTTCGACGTGCTCCAGCTAGAAGAT
TATGACTGGGTGACCGGCGGGCGCAGCGGCGAGACCGCTGGCGCGCGCGCCGCGATGGCGCTGCGGCTCGGTTATCCCAT
TGCAGAACAGCATTATTTTTCGGGGTTCGTGCTGCTGCCCGAACAGCGCGGCCGGTGGGCGGCGATCGCAGAGGCCGCCG
ACGCGGCGCGGCGCGCGGGGGTGGCGCGGACCTTTATCTGGGCGCTGCCGCAGGTGGCGCGCGACGGCTTCACGGCCTTT
GATGGGGAGGACAGGGTGCAGGCGTTCGATGCAGTGGATTTCCCGATTGCGATCGGGCGCGAGGCGGTGGCGCTGACCGA
ATTTTCGACGCAGATCGTCAGCTCGCCATCGGGGCACGAACAGCGCGCGAGCGAATGGGCCGAGGCACGGATGCGCTATG
ACGCCGGGCCGGGGATCAGGTCCGAGGCCGATGTGCGCGCGCTGACGGCGTTTTTCCGCGCGCGGCGCGGCGCGGCGCGC
GCGTTCCGCTTTCGCGATCCGTTCGACAGCAGTTCGGCCGCCGATAACGGGCTGCCGACCGCCGAGGATCAGTGGCTGGG
GACAGGCGACGGGGTGCGGCGGCAATTTGCGCTGGTGAAGCGTTATGGCGAAGGCGACGCCGAAGCGGTGCGGCCGATCC
GCCTGCCGGTCGCGGGGAGCGTGCGCGTGTCGGTGGGTGGGATCGAGACGGCGGCGTTCCTGGTGACGGGCGAAGGCGAG
GTGCTGCTCGACGCGGCGCCCGCCGAGGGCGCGGTAGTGCGGGCGGGATTCCGCTTCGACGTGCCGGTGCGCTTTGCCGA
CGACCGGCTGGAGGTGAGCCGCGCGACCTTCCTCGCGGGCGAGCTGGCGAGCGTGCCGCTGGTCGAGGTGCGCGCGCCAT
GGTGA

Upstream 100 bases:

>100_bases
ATGTGCAGGGGCCGGCGGGCAATGATCCGCAGCGGCTGGCGCAGACGGGGCGGCAACTGGCGCGCGCGGTGCGGCGCGCG
GTGGCGGCGGGGGAGGACTG

Downstream 100 bases:

>100_bases
CGCCGGTGAGCCTGAACGCCGCGCCCGACTGGCTGCGCGCGGAGCTGGTGACGCTCGCCTGGTGCTGGCGCCTGTCGCGG
CGCGACGGGGTGACGATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 774; Mature: 773

Protein sequence:

>774_residues
MGWALVAAAEPHHRKGWIKRFDPRFWTVDFARPMMASVTSAAPGALRVEAVFYRKQDLAGLIWETADRWDHPLLAYETRR
DFRHTQLLFRWRSGGVKPLDALHGPTLTIEGRDAGGNPRAWYVRLWNYAEGSAEDAVVTLDFDALDGGFLLPGEADPVWA
GDVDRMFVSLVPPTYDGGEGDLDAPVEGWAEMSDIVCTGSGSVLAIGDAVLPETALGMTNGYDDCYHLTPARVVRQIVQL
GYRGDVVHYVGMSHYMRLAPSAAGLLADASAGALNGPCAAWHRDLAAACAAAGLGLIWSLSYELFDAYCPEDWKQRDADG
APALTGWEPPSTLLSPANAAAMAWLQAVARAFVAIGRDAGLACRFQVGEPWWWIADGGRICAYDAAASAALGGAGVAIAD
VRGPLDAAQRAMLDALGALLADSTAALVAAAREEAGAAGLVSHLLVYLPTVLDPAAAEVRRANVPLGWAAPAFDVLQLED
YDWVTGGRSGETAGARAAMALRLGYPIAEQHYFSGFVLLPEQRGRWAAIAEAADAARRAGVARTFIWALPQVARDGFTAF
DGEDRVQAFDAVDFPIAIGREAVALTEFSTQIVSSPSGHEQRASEWAEARMRYDAGPGIRSEADVRALTAFFRARRGAAR
AFRFRDPFDSSSAADNGLPTAEDQWLGTGDGVRRQFALVKRYGEGDAEAVRPIRLPVAGSVRVSVGGIETAAFLVTGEGE
VLLDAAPAEGAVVRAGFRFDVPVRFADDRLEVSRATFLAGELASVPLVEVRAPW

Sequences:

>Translated_774_residues
MGWALVAAAEPHHRKGWIKRFDPRFWTVDFARPMMASVTSAAPGALRVEAVFYRKQDLAGLIWETADRWDHPLLAYETRR
DFRHTQLLFRWRSGGVKPLDALHGPTLTIEGRDAGGNPRAWYVRLWNYAEGSAEDAVVTLDFDALDGGFLLPGEADPVWA
GDVDRMFVSLVPPTYDGGEGDLDAPVEGWAEMSDIVCTGSGSVLAIGDAVLPETALGMTNGYDDCYHLTPARVVRQIVQL
GYRGDVVHYVGMSHYMRLAPSAAGLLADASAGALNGPCAAWHRDLAAACAAAGLGLIWSLSYELFDAYCPEDWKQRDADG
APALTGWEPPSTLLSPANAAAMAWLQAVARAFVAIGRDAGLACRFQVGEPWWWIADGGRICAYDAAASAALGGAGVAIAD
VRGPLDAAQRAMLDALGALLADSTAALVAAAREEAGAAGLVSHLLVYLPTVLDPAAAEVRRANVPLGWAAPAFDVLQLED
YDWVTGGRSGETAGARAAMALRLGYPIAEQHYFSGFVLLPEQRGRWAAIAEAADAARRAGVARTFIWALPQVARDGFTAF
DGEDRVQAFDAVDFPIAIGREAVALTEFSTQIVSSPSGHEQRASEWAEARMRYDAGPGIRSEADVRALTAFFRARRGAAR
AFRFRDPFDSSSAADNGLPTAEDQWLGTGDGVRRQFALVKRYGEGDAEAVRPIRLPVAGSVRVSVGGIETAAFLVTGEGE
VLLDAAPAEGAVVRAGFRFDVPVRFADDRLEVSRATFLAGELASVPLVEVRAPW
>Mature_773_residues
GWALVAAAEPHHRKGWIKRFDPRFWTVDFARPMMASVTSAAPGALRVEAVFYRKQDLAGLIWETADRWDHPLLAYETRRD
FRHTQLLFRWRSGGVKPLDALHGPTLTIEGRDAGGNPRAWYVRLWNYAEGSAEDAVVTLDFDALDGGFLLPGEADPVWAG
DVDRMFVSLVPPTYDGGEGDLDAPVEGWAEMSDIVCTGSGSVLAIGDAVLPETALGMTNGYDDCYHLTPARVVRQIVQLG
YRGDVVHYVGMSHYMRLAPSAAGLLADASAGALNGPCAAWHRDLAAACAAAGLGLIWSLSYELFDAYCPEDWKQRDADGA
PALTGWEPPSTLLSPANAAAMAWLQAVARAFVAIGRDAGLACRFQVGEPWWWIADGGRICAYDAAASAALGGAGVAIADV
RGPLDAAQRAMLDALGALLADSTAALVAAAREEAGAAGLVSHLLVYLPTVLDPAAAEVRRANVPLGWAAPAFDVLQLEDY
DWVTGGRSGETAGARAAMALRLGYPIAEQHYFSGFVLLPEQRGRWAAIAEAADAARRAGVARTFIWALPQVARDGFTAFD
GEDRVQAFDAVDFPIAIGREAVALTEFSTQIVSSPSGHEQRASEWAEARMRYDAGPGIRSEADVRALTAFFRARRGAARA
FRFRDPFDSSSAADNGLPTAEDQWLGTGDGVRRQFALVKRYGEGDAEAVRPIRLPVAGSVRVSVGGIETAAFLVTGEGEV
LLDAAPAEGAVVRAGFRFDVPVRFADDRLEVSRATFLAGELASVPLVEVRAPW

Specific function: Unknown

COG id: COG5448

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82838; Mature: 82707

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00143 INSULINASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWALVAAAEPHHRKGWIKRFDPRFWTVDFARPMMASVTSAAPGALRVEAVFYRKQDLAG
CCEEEEEECCCCHHCCCHHHCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHH
LIWETADRWDHPLLAYETRRDFRHTQLLFRWRSGGVKPLDALHGPTLTIEGRDAGGNPRA
HHHHHHHHCCCCEEEEHHHHHHHHHHHHHHECCCCCCCHHHHCCCEEEEECCCCCCCCCE
WYVRLWNYAEGSAEDAVVTLDFDALDGGFLLPGEADPVWAGDVDRMFVSLVPPTYDGGEG
EEEEEEECCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCHHHHHHEECCCCCCCCCC
DLDAPVEGWAEMSDIVCTGSGSVLAIGDAVLPETALGMTNGYDDCYHLTPARVVRQIVQL
CCCCCHHHHHHHCCEEEECCCCEEEECCCCCCHHHHCCCCCCCCCEECCHHHHHHHHHHC
GYRGDVVHYVGMSHYMRLAPSAAGLLADASAGALNGPCAAWHRDLAAACAAAGLGLIWSL
CCCCCEEEEHHHHHHHHHCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SYELFDAYCPEDWKQRDADGAPALTGWEPPSTLLSPANAAAMAWLQAVARAFVAIGRDAG
HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
LACRFQVGEPWWWIADGGRICAYDAAASAALGGAGVAIADVRGPLDAAQRAMLDALGALL
EEEEEEECCCEEEEECCCEEEEECCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
ADSTAALVAAAREEAGAAGLVSHLLVYLPTVLDPAAAEVRRANVPLGWAAPAFDVLQLED
HCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEECC
YDWVTGGRSGETAGARAAMALRLGYPIAEQHYFSGFVLLPEQRGRWAAIAEAADAARRAG
CCEECCCCCCCCCCHHHEEEEEECCCHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHC
VARTFIWALPQVARDGFTAFDGEDRVQAFDAVDFPIAIGREAVALTEFSTQIVSSPSGHE
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHCCCCEEEHHHHHHHHHCCCCCCH
QRASEWAEARMRYDAGPGIRSEADVRALTAFFRARRGAARAFRFRDPFDSSSAADNGLPT
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCCCCCC
AEDQWLGTGDGVRRQFALVKRYGEGDAEAVRPIRLPVAGSVRVSVGGIETAAFLVTGEGE
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCEEEECCCCCEEEEECCEEEEEEEEECCCC
VLLDAAPAEGAVVRAGFRFDVPVRFADDRLEVSRATFLAGELASVPLVEVRAPW
EEEECCCCCCCEEEECEEECCCEEECCCHHHHHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure 
GWALVAAAEPHHRKGWIKRFDPRFWTVDFARPMMASVTSAAPGALRVEAVFYRKQDLAG
CEEEEEECCCCHHCCCHHHCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHH
LIWETADRWDHPLLAYETRRDFRHTQLLFRWRSGGVKPLDALHGPTLTIEGRDAGGNPRA
HHHHHHHHCCCCEEEEHHHHHHHHHHHHHHECCCCCCCHHHHCCCEEEEECCCCCCCCCE
WYVRLWNYAEGSAEDAVVTLDFDALDGGFLLPGEADPVWAGDVDRMFVSLVPPTYDGGEG
EEEEEEECCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCHHHHHHEECCCCCCCCCC
DLDAPVEGWAEMSDIVCTGSGSVLAIGDAVLPETALGMTNGYDDCYHLTPARVVRQIVQL
CCCCCHHHHHHHCCEEEECCCCEEEECCCCCCHHHHCCCCCCCCCEECCHHHHHHHHHHC
GYRGDVVHYVGMSHYMRLAPSAAGLLADASAGALNGPCAAWHRDLAAACAAAGLGLIWSL
CCCCCEEEEHHHHHHHHHCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SYELFDAYCPEDWKQRDADGAPALTGWEPPSTLLSPANAAAMAWLQAVARAFVAIGRDAG
HHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
LACRFQVGEPWWWIADGGRICAYDAAASAALGGAGVAIADVRGPLDAAQRAMLDALGALL
EEEEEEECCCEEEEECCCEEEEECCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
ADSTAALVAAAREEAGAAGLVSHLLVYLPTVLDPAAAEVRRANVPLGWAAPAFDVLQLED
HCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEECC
YDWVTGGRSGETAGARAAMALRLGYPIAEQHYFSGFVLLPEQRGRWAAIAEAADAARRAG
CCEECCCCCCCCCCHHHEEEEEECCCHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHC
VARTFIWALPQVARDGFTAFDGEDRVQAFDAVDFPIAIGREAVALTEFSTQIVSSPSGHE
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHCCCCEEEHHHHHHHHHCCCCCCH
QRASEWAEARMRYDAGPGIRSEADVRALTAFFRARRGAARAFRFRDPFDSSSAADNGLPT
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCCCCCC
AEDQWLGTGDGVRRQFALVKRYGEGDAEAVRPIRLPVAGSVRVSVGGIETAAFLVTGEGE
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCEEEECCCCCEEEEECCEEEEEEEEECCCC
VLLDAAPAEGAVVRAGFRFDVPVRFADDRLEVSRATFLAGELASVPLVEVRAPW
EEEECCCCCCCEEEECEEECCCEEECCCHHHHHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA