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The map label for this gene is pal [C]

Identifier: 103487471

GI number: 103487471

Start: 2096682

End: 2097803

Strand: Reverse

Name: pal [C]

Synonym: Sala_1988

Alternate gene names: 103487471

Gene position: 2097803-2096682 (Counterclockwise)

Preceding gene: 103487472

Following gene: 103487470

Centisome position: 62.71

GC content: 66.4

Gene sequence:

>1122_bases
ATGAGGAAGCTTGCCGTCGCTGTGGCGTTGGCCTCCACCACCCTCGCGTCGCCGTCCATGGCGCGCGACGATTCCTGGTA
TGTCGGTGTTGGCGCGGGCGCAATGCTCGTCGAAGACATTGATCTCGATATCGGCACCTTCAACAATGCCGGGTCGCTCG
ACCATCGCGCGGGCTATGATTTCGAAGGCACCGTCGGTTATGACTTCGGCGGGTTCCGTGCCGAAGTCGAAGTCGGCTTC
CGTGAAGCCGACATCAAGTCGGGCCGTTTCGGCAACCCCGGCATCCCGCAGACGGCATCGGGCGCGGGTACGCTGTTCAC
CGGCTCGACCGACCTGAACGGCGATTCGAACGCGCTCAGCTTCATGGTCAACGGCATGCTCGACTTCGGCGACGACGACG
GCCTGCAGGGCTTTGTCGGCGGTGGCGCCGGTGTCGCCCGCGTGTCGGTCGAACCCGTCTTTGCCGGTCCGTTCCTCGAC
GATTCGGACACGGGCTTTGCCTGGCAGGCGATCGCGGGCGTCCGCGCGCCGCTCAGCAGCAACTGGGACGTCGGCCTGAA
GTATCGCTTCTTCAACGCCGACAATGTCGATCTGGTGGATCAGGCCGGTCGCGACGTTTCGACGCGCTTCCGCTCGCACT
CGATCCTCGGCACGCTGACGTACAACTTCGGCGGCGCTCCGGAGCCGGTGGCGCCTCCGCCGCCGCCTCCGCCGCCCCCG
CCGCCCCCGCCGCCCCCGCCGCCTCCGCCGCCGCCGCCGGTCGTGGAATGCGCGCCTGGGCCGTACATCGTGTATTTCGA
CTGGGATCAGTCGAACATCACGCCGGAAGCGGCTTCGACGCTCGACAATGCGATCAGCGCCTATAACCGTGGTTGCACGG
GCACGCAGATCATGCTCGCCGGTCACGCCGACCGTTCGGGTTCGGCCCGCTACAACGTCGGCCTGTCGGAACGCCGCAAC
GATGCGGTTCGCAGCTATCTGACCGCTCGCGGTATCTCGGATGGTTCGATCAGCGCGCAGGCGTTCGGCGAAACCCGTCC
GGCCGTTGCGACCGCCGACGGCGTCCGCAACGACCAGAACCGTCGCGTGGAAATCACTTACGGTCCGAACTCGGGCATGT
AA

Upstream 100 bases:

>100_bases
TTTTTGGCAACAGATTGACGATTTGTTAGCTTGCACGGAACCAAAGCGGCGAGTAGGACGTCTGGCGAGACGTATATCTC
AAATTGAAAGGGGAATTATT

Downstream 100 bases:

>100_bases
GACCGGTTTCCATCCCCGACGGGACTGGAAGAAAAGAAGGGCGGTACCGGAAGGTGCCGCCCTTTCTTTATGGCCCACGC
TTCTGCTGCTTTTCGCCGCG

Product: OmpA/MotB

Products: NA

Alternate protein names: OMPC [H]

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRKLAVAVALASTTLASPSMARDDSWYVGVGAGAMLVEDIDLDIGTFNNAGSLDHRAGYDFEGTVGYDFGGFRAEVEVGF
READIKSGRFGNPGIPQTASGAGTLFTGSTDLNGDSNALSFMVNGMLDFGDDDGLQGFVGGGAGVARVSVEPVFAGPFLD
DSDTGFAWQAIAGVRAPLSSNWDVGLKYRFFNADNVDLVDQAGRDVSTRFRSHSILGTLTYNFGGAPEPVAPPPPPPPPP
PPPPPPPPPPPPPVVECAPGPYIVYFDWDQSNITPEAASTLDNAISAYNRGCTGTQIMLAGHADRSGSARYNVGLSERRN
DAVRSYLTARGISDGSISAQAFGETRPAVATADGVRNDQNRRVEITYGPNSGM

Sequences:

>Translated_373_residues
MRKLAVAVALASTTLASPSMARDDSWYVGVGAGAMLVEDIDLDIGTFNNAGSLDHRAGYDFEGTVGYDFGGFRAEVEVGF
READIKSGRFGNPGIPQTASGAGTLFTGSTDLNGDSNALSFMVNGMLDFGDDDGLQGFVGGGAGVARVSVEPVFAGPFLD
DSDTGFAWQAIAGVRAPLSSNWDVGLKYRFFNADNVDLVDQAGRDVSTRFRSHSILGTLTYNFGGAPEPVAPPPPPPPPP
PPPPPPPPPPPPPVVECAPGPYIVYFDWDQSNITPEAASTLDNAISAYNRGCTGTQIMLAGHADRSGSARYNVGLSERRN
DAVRSYLTARGISDGSISAQAFGETRPAVATADGVRNDQNRRVEITYGPNSGM
>Mature_373_residues
MRKLAVAVALASTTLASPSMARDDSWYVGVGAGAMLVEDIDLDIGTFNNAGSLDHRAGYDFEGTVGYDFGGFRAEVEVGF
READIKSGRFGNPGIPQTASGAGTLFTGSTDLNGDSNALSFMVNGMLDFGDDDGLQGFVGGGAGVARVSVEPVFAGPFLD
DSDTGFAWQAIAGVRAPLSSNWDVGLKYRFFNADNVDLVDQAGRDVSTRFRSHSILGTLTYNFGGAPEPVAPPPPPPPPP
PPPPPPPPPPPPPVVECAPGPYIVYFDWDQSNITPEAASTLDNAISAYNRGCTGTQIMLAGHADRSGSARYNVGLSERRN
DAVRSYLTARGISDGSISAQAFGETRPAVATADGVRNDQNRRVEITYGPNSGM

Specific function: Growth enhancer [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=105, Percent_Identity=38.0952380952381, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1787191, Length=378, Percent_Identity=26.1904761904762, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 39084; Mature: 39084

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLAVAVALASTTLASPSMARDDSWYVGVGAGAMLVEDIDLDIGTFNNAGSLDHRAGYD
CCCEEEEEEEHHHHHCCCCCCCCCCEEEEECCCEEEEEEECCCEECCCCCCCCCCCCCCC
FEGTVGYDFGGFRAEVEVGFREADIKSGRFGNPGIPQTASGAGTLFTGSTDLNGDSNALS
CCCEEECCCCCEEEEEEECEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHEE
FMVNGMLDFGDDDGLQGFVGGGAGVARVSVEPVFAGPFLDDSDTGFAWQAIAGVRAPLSS
EEEECEEECCCCCCCEEEECCCCCEEEEEECEEEECCCCCCCCCCEEEEEHHHHCCCCCC
NWDVGLKYRFFNADNVDLVDQAGRDVSTRFRSHSILGTLTYNFGGAPEPVAPPPPPPPPP
CCCCEEEEEEECCCCCHHHHHCCCCHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCC
PPPPPPPPPPPPPVVECAPGPYIVYFDWDQSNITPEAASTLDNAISAYNRGCTGTQIMLA
CCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
GHADRSGSARYNVGLSERRNDAVRSYLTARGISDGSISAQAFGETRPAVATADGVRNDQN
ECCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCEEECCCCCCCCC
RRVEITYGPNSGM
CEEEEEECCCCCC
>Mature Secondary Structure
MRKLAVAVALASTTLASPSMARDDSWYVGVGAGAMLVEDIDLDIGTFNNAGSLDHRAGYD
CCCEEEEEEEHHHHHCCCCCCCCCCEEEEECCCEEEEEEECCCEECCCCCCCCCCCCCCC
FEGTVGYDFGGFRAEVEVGFREADIKSGRFGNPGIPQTASGAGTLFTGSTDLNGDSNALS
CCCEEECCCCCEEEEEEECEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHEE
FMVNGMLDFGDDDGLQGFVGGGAGVARVSVEPVFAGPFLDDSDTGFAWQAIAGVRAPLSS
EEEECEEECCCCCCCEEEECCCCCEEEEEECEEEECCCCCCCCCCEEEEEHHHHCCCCCC
NWDVGLKYRFFNADNVDLVDQAGRDVSTRFRSHSILGTLTYNFGGAPEPVAPPPPPPPPP
CCCCEEEEEEECCCCCHHHHHCCCCHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCC
PPPPPPPPPPPPPVVECAPGPYIVYFDWDQSNITPEAASTLDNAISAYNRGCTGTQIMLA
CCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
GHADRSGSARYNVGLSERRNDAVRSYLTARGISDGSISAQAFGETRPAVATADGVRNDQN
ECCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCEEECCCCCCCCC
RRVEITYGPNSGM
CEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA