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The map label for this gene is 103487467

Identifier: 103487467

GI number: 103487467

Start: 2092258

End: 2093478

Strand: Reverse

Name: 103487467

Synonym: Sala_1984

Alternate gene names: NA

Gene position: 2093478-2092258 (Counterclockwise)

Preceding gene: 103487470

Following gene: 103487459

Centisome position: 62.58

GC content: 64.05

Gene sequence:

>1221_bases
ATGCTGTATCACGCCTTTGACATGCAGAAGAACTGGCTGGCAGGCGCCAGCGCGCTGGCGACCGCGGGCGCGCAGGTGAT
GCAGCACCCCGCGAATCCACTCGGCTATTTCAGCGGCAGCCCGATGTTTGCCTCGGCGCTCGAGGTCTTTGCCCACGCCG
CTGCGCCGCGCGGCAAGCCGGGGTTCGAGCTGTACGAAACGACCGTCGATGGCGAGACGGTGCGCGTGACCGAGGCGATC
GAGGCGCGGAGGCCCTTTGGCCAGCTCAAGCATTTCAAGCACAAGGGCGCGAAAGATGCGCCCAGGCTGCTGATCGTCGC
ACCGATGTCGGGCCATTATGCGACGCTGCTGCGCGGGACGGTCGAACGGATGCTGCCCGGCCACGACGTGTGGATCACCG
ACTGGCGCGATGCGCGCAACGTGCCGCTGGAAGCGGGCCGGTTCGACCTCGACGATTATATCGACTATCTGATCGCCTGG
CTGGAGCATATCGGGCCGGGCGCGCACATGCTTGCGGTGTGCCAGCCATCGGTGCCGAGCCTGGCCGCCGCGGCGATCAT
GGCGGCGAACAGGCATCAATGCCGTCCGAAGACGCTGACGATGATGGGAGGGCCGATCGACACGCGCAAGGCGCCGACCG
CGGTGAACGAACATGCGACCACGCGCCCCTATGCCTGGTTCCAGGAAAATGTCATCGCGACCGTTCCGGCCTATTATCCG
GGAGCGGGGCGGTGCGTCTATCCGGGCTTCCTGCAGCTTGCCGGTTTCATGTCGATGAACCTTGGCAACCATATGATGAG
CCATTGGGAGATGTTCAAACATCTGGTCGATGGCGACGGCGAAAGCGCCGACAAGACCAAGGAATTCTATGACGAGTATC
GCGCGGTGTGCGACATGACCGCCGAATTTTATTTGCAGACGGTCGATGCCGTGTTCCAGCGCCACCTGCTGCCCAGGGGC
GCGTTCGAGCACCGCGGCGAGCTGGTGGACATCGCAGCGATCGAGGATATTGCGATCCTGGCGATCGAGGGCGAGCGCGA
CGATATTTCGGGGATCGGCCAGACCAAGGCGGCGCTGACGCTGGCCAGGGCACTGCCTGCGGAACGGAAGAAATATCTGC
TGGCCAGGGGAGTGGGCCATTATGGCATTTTCAACGGCCGCAAGTGGCGCGAGGAGATTGCGCCGGTGGTCGAGCAATGG
ATCCGCGCGCACGGCGGCTGA

Upstream 100 bases:

>100_bases
CTGAACGAAATGATGCGTTGCACAATGGCGATCAAGGCCTAGACTGCGCGGCAACGGGGCGCCGGAAGAGCGTCCGACCG
GACCAAGGAAATCTCGATAG

Downstream 100 bases:

>100_bases
CGGATCGACGGGGCTGCCAGCCGCTCTAGCGTCTCCGTCCGAGATGCCCCGGCAGGTTGGTGGCGCGGGTCAGGCCGGGT
CGCCAGGTGTCGATTTGCGG

Product: polyhydroxyalkanoate depolymerase, intracellular

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; PHB De-Polymerase Domain-Containing Protein; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; PHB De-Polymerase; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MLYHAFDMQKNWLAGASALATAGAQVMQHPANPLGYFSGSPMFASALEVFAHAAAPRGKPGFELYETTVDGETVRVTEAI
EARRPFGQLKHFKHKGAKDAPRLLIVAPMSGHYATLLRGTVERMLPGHDVWITDWRDARNVPLEAGRFDLDDYIDYLIAW
LEHIGPGAHMLAVCQPSVPSLAAAAIMAANRHQCRPKTLTMMGGPIDTRKAPTAVNEHATTRPYAWFQENVIATVPAYYP
GAGRCVYPGFLQLAGFMSMNLGNHMMSHWEMFKHLVDGDGESADKTKEFYDEYRAVCDMTAEFYLQTVDAVFQRHLLPRG
AFEHRGELVDIAAIEDIAILAIEGERDDISGIGQTKAALTLARALPAERKKYLLARGVGHYGIFNGRKWREEIAPVVEQW
IRAHGG

Sequences:

>Translated_406_residues
MLYHAFDMQKNWLAGASALATAGAQVMQHPANPLGYFSGSPMFASALEVFAHAAAPRGKPGFELYETTVDGETVRVTEAI
EARRPFGQLKHFKHKGAKDAPRLLIVAPMSGHYATLLRGTVERMLPGHDVWITDWRDARNVPLEAGRFDLDDYIDYLIAW
LEHIGPGAHMLAVCQPSVPSLAAAAIMAANRHQCRPKTLTMMGGPIDTRKAPTAVNEHATTRPYAWFQENVIATVPAYYP
GAGRCVYPGFLQLAGFMSMNLGNHMMSHWEMFKHLVDGDGESADKTKEFYDEYRAVCDMTAEFYLQTVDAVFQRHLLPRG
AFEHRGELVDIAAIEDIAILAIEGERDDISGIGQTKAALTLARALPAERKKYLLARGVGHYGIFNGRKWREEIAPVVEQW
IRAHGG
>Mature_406_residues
MLYHAFDMQKNWLAGASALATAGAQVMQHPANPLGYFSGSPMFASALEVFAHAAAPRGKPGFELYETTVDGETVRVTEAI
EARRPFGQLKHFKHKGAKDAPRLLIVAPMSGHYATLLRGTVERMLPGHDVWITDWRDARNVPLEAGRFDLDDYIDYLIAW
LEHIGPGAHMLAVCQPSVPSLAAAAIMAANRHQCRPKTLTMMGGPIDTRKAPTAVNEHATTRPYAWFQENVIATVPAYYP
GAGRCVYPGFLQLAGFMSMNLGNHMMSHWEMFKHLVDGDGESADKTKEFYDEYRAVCDMTAEFYLQTVDAVFQRHLLPRG
AFEHRGELVDIAAIEDIAILAIEGERDDISGIGQTKAALTLARALPAERKKYLLARGVGHYGIFNGRKWREEIAPVVEQW
IRAHGG

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44986; Mature: 44986

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYHAFDMQKNWLAGASALATAGAQVMQHPANPLGYFSGSPMFASALEVFAHAAAPRGKP
CCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
GFELYETTVDGETVRVTEAIEARRPFGQLKHFKHKGAKDAPRLLIVAPMSGHYATLLRGT
CCEEEEEECCCCEEEHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHH
VERMLPGHDVWITDWRDARNVPLEAGRFDLDDYIDYLIAWLEHIGPGAHMLAVCQPSVPS
HHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH
LAAAAIMAANRHQCRPKTLTMMGGPIDTRKAPTAVNEHATTRPYAWFQENVIATVPAYYP
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCC
GAGRCVYPGFLQLAGFMSMNLGNHMMSHWEMFKHLVDGDGESADKTKEFYDEYRAVCDMT
CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AEFYLQTVDAVFQRHLLPRGAFEHRGELVDIAAIEDIAILAIEGERDDISGIGQTKAALT
HHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEECCEEEEEEECCCCCCCCCCHHHHHHH
LARALPAERKKYLLARGVGHYGIFNGRKWREEIAPVVEQWIRAHGG
HHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLYHAFDMQKNWLAGASALATAGAQVMQHPANPLGYFSGSPMFASALEVFAHAAAPRGKP
CCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
GFELYETTVDGETVRVTEAIEARRPFGQLKHFKHKGAKDAPRLLIVAPMSGHYATLLRGT
CCEEEEEECCCCEEEHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHH
VERMLPGHDVWITDWRDARNVPLEAGRFDLDDYIDYLIAWLEHIGPGAHMLAVCQPSVPS
HHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHH
LAAAAIMAANRHQCRPKTLTMMGGPIDTRKAPTAVNEHATTRPYAWFQENVIATVPAYYP
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCC
GAGRCVYPGFLQLAGFMSMNLGNHMMSHWEMFKHLVDGDGESADKTKEFYDEYRAVCDMT
CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AEFYLQTVDAVFQRHLLPRGAFEHRGELVDIAAIEDIAILAIEGERDDISGIGQTKAALT
HHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEECCEEEEEEECCCCCCCCCCHHHHHHH
LARALPAERKKYLLARGVGHYGIFNGRKWREEIAPVVEQWIRAHGG
HHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA