Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487456

Identifier: 103487456

GI number: 103487456

Start: 2080429

End: 2080683

Strand: Reverse

Name: 103487456

Synonym: Sala_1972

Alternate gene names: NA

Gene position: 2080683-2080429 (Counterclockwise)

Preceding gene: 103487457

Following gene: 103487455

Centisome position: 62.2

GC content: 70.2

Gene sequence:

>255_bases
GTGTACCGCTTTGAAATCGACGCGACGCCCGACCCGCAGGCGCTGCCGCGCGTTGCCAATGTTTTCGCGCAGCGCGCGCT
CGTGCCCGCCGCGATCACGATGAACCTCCTGCCGACGCATATAGCCATCGAGGTCGTCGTCGCCGGTCTGGACGGCGCGC
AGGCCGCCGTCATCGCCGCCAAGCTCGGCGAGGGTGTTGCGGTCCTGCGATCCGAAGCGGCGGCCGTCGATCCACCGCTC
CGCCTCGCGGGCTGA

Upstream 100 bases:

>100_bases
GCGCGGCGCGCGAGGGACGCTCCCCTGCATTCGTCGCCGACGAAATGGCCGAAGAGGTGATCGCGGGCGCCAAGCGCGTG
GCGGCCTGAGGGCCCGCGCC

Downstream 100 bases:

>100_bases
TCACGGCGCGTTCAACTTTTTCTTTCGCCGGAAGGAGGCGAGGGCGGCTTGCCCCGCCCGGCCGCGTGTGTAACGGCCGC
GCTGACGAATGGCGGGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MYRFEIDATPDPQALPRVANVFAQRALVPAAITMNLLPTHIAIEVVVAGLDGAQAAVIAAKLGEGVAVLRSEAAAVDPPL
RLAG

Sequences:

>Translated_84_residues
MYRFEIDATPDPQALPRVANVFAQRALVPAAITMNLLPTHIAIEVVVAGLDGAQAAVIAAKLGEGVAVLRSEAAAVDPPL
RLAG
>Mature_84_residues
MYRFEIDATPDPQALPRVANVFAQRALVPAAITMNLLPTHIAIEVVVAGLDGAQAAVIAAKLGEGVAVLRSEAAAVDPPL
RLAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8655; Mature: 8655

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRFEIDATPDPQALPRVANVFAQRALVPAAITMNLLPTHIAIEVVVAGLDGAQAAVIAA
CEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHEEEEEEECCCCCHHHHHHH
KLGEGVAVLRSEAAAVDPPLRLAG
HHCCCCEEHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MYRFEIDATPDPQALPRVANVFAQRALVPAAITMNLLPTHIAIEVVVAGLDGAQAAVIAA
CEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHEEEEEEECCCCCHHHHHHH
KLGEGVAVLRSEAAAVDPPLRLAG
HHCCCCEEHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA