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The map label for this gene is yhdE [C]

Identifier: 103487399

GI number: 103487399

Start: 2017996

End: 2018568

Strand: Reverse

Name: yhdE [C]

Synonym: Sala_1915

Alternate gene names: 103487399

Gene position: 2018568-2017996 (Counterclockwise)

Preceding gene: 103487400

Following gene: 103487398

Centisome position: 60.34

GC content: 68.24

Gene sequence:

>573_bases
ATGCCCGCCCTCGTGCTTGCCTCGACCTCGCCGCGTCGGCGCGAATTGCTGGCGCGGATAGGCGTCATGCCCGCGCGTAT
TGCCGCTCCCGAAATCGACGAGACGCCGCTGAAGGGCGAGCTGCCGCGCGACTATGTCGTCCGCCTTGCGCGCGGCAAGG
CGCTGGCGGTTGCGCGGGCGCCGGACGAGGTTGTGCTCGCGGGCGACACCACCGTCTCGGTCGGGCGCCGAATCCTTGAA
AAACCGGCCGACGAGCCTGACCTGCGGCGGATGCTCGGCTTGCTGTCGGGCCGTCGCCATCATGTCTGGTCGGGTGTGTG
CGTCGTCGGCACCGACGGCAAGGCCCGTGTGCGCGCGGTCGATACGATCGTCGCCTTCAAGGCGCTGTCGGCCGCCGAGA
TCGACGCCTATGTCGCGAGTGGCGAGGGGATGGGAAAGGCCGGGGGCTATGCGATCCAGGGCCGCGCCGAGGCCTTTGTC
CGCTTCCTGTCGGGTAGCCATTCCAATGTCGTTGGCTTGCCGTTGTTCGAAACGCGGGCGCTTTTGAGCAGCGTGGGAAT
CCCGCTTGGCTGA

Upstream 100 bases:

>100_bases
TCCGCGTGCTCGTCGGCGACGAAGTGCTCGTCGAACTCACGCCCTATGACCTGACCAAGGGTCGGATCACCTATCGCTTC
AAGTGAGCGGCGCGGCGACC

Downstream 100 bases:

>100_bases
GTGGCTTTACGAGGCCGGGATCGGCGAGGCGCGCGCGGCGCTGGTCGTGGATGGCCGTATCGTCGAGGCGCGGATCGAGC
GTGACGATGAAGGGCCGCGC

Product: maf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MPALVLASTSPRRRELLARIGVMPARIAAPEIDETPLKGELPRDYVVRLARGKALAVARAPDEVVLAGDTTVSVGRRILE
KPADEPDLRRMLGLLSGRRHHVWSGVCVVGTDGKARVRAVDTIVAFKALSAAEIDAYVASGEGMGKAGGYAIQGRAEAFV
RFLSGSHSNVVGLPLFETRALLSSVGIPLG

Sequences:

>Translated_190_residues
MPALVLASTSPRRRELLARIGVMPARIAAPEIDETPLKGELPRDYVVRLARGKALAVARAPDEVVLAGDTTVSVGRRILE
KPADEPDLRRMLGLLSGRRHHVWSGVCVVGTDGKARVRAVDTIVAFKALSAAEIDAYVASGEGMGKAGGYAIQGRAEAFV
RFLSGSHSNVVGLPLFETRALLSSVGIPLG
>Mature_189_residues
PALVLASTSPRRRELLARIGVMPARIAAPEIDETPLKGELPRDYVVRLARGKALAVARAPDEVVLAGDTTVSVGRRILEK
PADEPDLRRMLGLLSGRRHHVWSGVCVVGTDGKARVRAVDTIVAFKALSAAEIDAYVASGEGMGKAGGYAIQGRAEAFVR
FLSGSHSNVVGLPLFETRALLSSVGIPLG

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Homo sapiens, GI117553627, Length=191, Percent_Identity=42.4083769633508, Blast_Score=113, Evalue=1e-25,
Organism=Homo sapiens, GI291045183, Length=183, Percent_Identity=39.344262295082, Blast_Score=97, Evalue=6e-21,
Organism=Homo sapiens, GI291045181, Length=141, Percent_Identity=46.0992907801418, Blast_Score=94, Evalue=5e-20,
Organism=Homo sapiens, GI310133124, Length=124, Percent_Identity=47.5806451612903, Blast_Score=92, Evalue=2e-19,
Organism=Escherichia coli, GI1789646, Length=188, Percent_Identity=45.7446808510638, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI87081830, Length=178, Percent_Identity=37.0786516853933, Blast_Score=98, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI193202443, Length=180, Percent_Identity=33.8888888888889, Blast_Score=93, Evalue=7e-20,
Organism=Drosophila melanogaster, GI78706856, Length=182, Percent_Identity=35.7142857142857, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1915_SPHAL (Q1GRU5)

Other databases:

- EMBL:   CP000356
- RefSeq:   YP_616960.1
- ProteinModelPortal:   Q1GRU5
- SMR:   Q1GRU5
- GeneID:   4082772
- GenomeReviews:   CP000356_GR
- KEGG:   sal:Sala_1915
- NMPDR:   fig|317655.9.peg.1844
- HOGENOM:   HBG414045
- OMA:   VVGLPLC
- BioCyc:   SALA317655:SALA_1915-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305
- TIGRFAMs:   TIGR00172

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 20087; Mature: 19955

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: ACT_SITE 34-34

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALVLASTSPRRRELLARIGVMPARIAAPEIDETPLKGELPRDYVVRLARGKALAVARA
CCEEEEECCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEC
PDEVVLAGDTTVSVGRRILEKPADEPDLRRMLGLLSGRRHHVWSGVCVVGTDGKARVRAV
CCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCEEEEECCCCCHHHHH
DTIVAFKALSAAEIDAYVASGEGMGKAGGYAIQGRAEAFVRFLSGSHSNVVGLPLFETRA
HHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEECHHHHHHHHHCCCCCCEEECCHHHHHH
LLSSVGIPLG
HHHHCCCCCC
>Mature Secondary Structure 
PALVLASTSPRRRELLARIGVMPARIAAPEIDETPLKGELPRDYVVRLARGKALAVARA
CEEEEECCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEC
PDEVVLAGDTTVSVGRRILEKPADEPDLRRMLGLLSGRRHHVWSGVCVVGTDGKARVRAV
CCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCEEEEECCCCCHHHHH
DTIVAFKALSAAEIDAYVASGEGMGKAGGYAIQGRAEAFVRFLSGSHSNVVGLPLFETRA
HHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEECHHHHHHHHHCCCCCCEEECCHHHHHH
LLSSVGIPLG
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA