| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is fghA [H]
Identifier: 103487318
GI number: 103487318
Start: 1929863
End: 1930711
Strand: Reverse
Name: fghA [H]
Synonym: Sala_1834
Alternate gene names: 103487318
Gene position: 1930711-1929863 (Counterclockwise)
Preceding gene: 103487319
Following gene: 103487313
Centisome position: 57.72
GC content: 64.78
Gene sequence:
>849_bases ATGACCCTCGAAACCCTCTCCACCATCCGCAGCCATGGCGGCACCCAGGGCGTGTACAGCCACGCCAGCACGACGACCGG CACCGACATGACCTTTGCGCTGTTCGTGCCCGACCACGCGCCGGGGACCAAGCTGCCGGTGCTCTGGTATCTGTCGGGGC TGACCTGCACCCACGCCAATGTGATGGAAAAGGGCGAATATCGCGCCGCCTGCGCCGAGCATGGCGTGATCTTTGTCGCG CCCGACACATCCCCACGCGGCGAAGATGTGCCCGACGATCCCGACGGGGCCTGGGATTTCGGGCTGGGCGCGGGCTTTTA TGTCGATGCGACCGTCGAGCCGTGGGCGAAGCATTACCGGATGCGGTCCTATATCGAGGACGAATTGCCTTCGCTGGTGC TGCGCAATTTCGCGAGCGCCGACCTGACGCGACAGGCGATCACGGGGCATTCGATGGGCGGGCATGGCGCTTTGACCATT GGCCTCCGCAATCCGGATCGCTTCCGCTCGGTGTCGGCTTTTTCGCCGATCGTTGCGCCGATCCGCTGCCCGTGGGGCGA AAAGGCGTTCGGTCACTATCTCGGCGACGACCGCGAGGCGTGGCGCGCCTATGACGCCTGCGCATTGCTCGACGACGGGC TTCGCCTGCCCGACCTGCTCGTCGATCAGGGCGATGCGGACACTTTCCTGGCTGAACAGCTCAGGACCGACCTGCTCGTC GAAGCCTGCGAGCGGAACGGGCAGAAGGCCGCGATCCGGATGCAGCCGGGATATGACCACAGCTATTTTTTCATCTCGAC CTTCATGGCCGAGCATGTCGCGTGGCACGCCGAGCGGTTGAAGGCGTAG
Upstream 100 bases:
>100_bases ACACGGGCACGCTGGGGCTTTCGGGCGGATCGATCCTCGACCTGCTGCGTCATTGGGGGCATGATCCGGTGATCGCCCCC ATTCCCGTTCAGGAAAGCGC
Downstream 100 bases:
>100_bases CCGTCGCCCCCGCGAAGGCGGGGGCCGCTGTCGGCATTGATCTTCCTCGCTGCGTAAACCTCCGGCGGCCCCCGCCTTCG CGGGGGTCACGGTTTGTCAG
Product: carboxylesterase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTLETLSTIRSHGGTQGVYSHASTTTGTDMTFALFVPDHAPGTKLPVLWYLSGLTCTHANVMEKGEYRAACAEHGVIFVA PDTSPRGEDVPDDPDGAWDFGLGAGFYVDATVEPWAKHYRMRSYIEDELPSLVLRNFASADLTRQAITGHSMGGHGALTI GLRNPDRFRSVSAFSPIVAPIRCPWGEKAFGHYLGDDREAWRAYDACALLDDGLRLPDLLVDQGDADTFLAEQLRTDLLV EACERNGQKAAIRMQPGYDHSYFFISTFMAEHVAWHAERLKA
Sequences:
>Translated_282_residues MTLETLSTIRSHGGTQGVYSHASTTTGTDMTFALFVPDHAPGTKLPVLWYLSGLTCTHANVMEKGEYRAACAEHGVIFVA PDTSPRGEDVPDDPDGAWDFGLGAGFYVDATVEPWAKHYRMRSYIEDELPSLVLRNFASADLTRQAITGHSMGGHGALTI GLRNPDRFRSVSAFSPIVAPIRCPWGEKAFGHYLGDDREAWRAYDACALLDDGLRLPDLLVDQGDADTFLAEQLRTDLLV EACERNGQKAAIRMQPGYDHSYFFISTFMAEHVAWHAERLKA >Mature_281_residues TLETLSTIRSHGGTQGVYSHASTTTGTDMTFALFVPDHAPGTKLPVLWYLSGLTCTHANVMEKGEYRAACAEHGVIFVAP DTSPRGEDVPDDPDGAWDFGLGAGFYVDATVEPWAKHYRMRSYIEDELPSLVLRNFASADLTRQAITGHSMGGHGALTIG LRNPDRFRSVSAFSPIVAPIRCPWGEKAFGHYLGDDREAWRAYDACALLDDGLRLPDLLVDQGDADTFLAEQLRTDLLVE ACERNGQKAAIRMQPGYDHSYFFISTFMAEHVAWHAERLKA
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate (Probable) [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=285, Percent_Identity=48.4210526315789, Blast_Score=284, Evalue=8e-77, Organism=Escherichia coli, GI1786551, Length=279, Percent_Identity=47.3118279569892, Blast_Score=281, Evalue=3e-77, Organism=Escherichia coli, GI1788477, Length=280, Percent_Identity=48.9285714285714, Blast_Score=262, Evalue=1e-71, Organism=Caenorhabditis elegans, GI17510185, Length=284, Percent_Identity=52.4647887323944, Blast_Score=288, Evalue=2e-78, Organism=Saccharomyces cerevisiae, GI6322393, Length=286, Percent_Identity=42.6573426573427, Blast_Score=235, Evalue=5e-63, Organism=Drosophila melanogaster, GI45551932, Length=286, Percent_Identity=49.3006993006993, Blast_Score=263, Evalue=9e-71, Organism=Drosophila melanogaster, GI24648347, Length=286, Percent_Identity=49.6503496503497, Blast_Score=263, Evalue=1e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31083; Mature: 30952
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLETLSTIRSHGGTQGVYSHASTTTGTDMTFALFVPDHAPGTKLPVLWYLSGLTCTHAN CCHHHHHHHHHCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCEECHHH VMEKGEYRAACAEHGVIFVAPDTSPRGEDVPDDPDGAWDFGLGAGFYVDATVEPWAKHYR HHHCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCHHHHHHH MRSYIEDELPSLVLRNFASADLTRQAITGHSMGGHGALTIGLRNPDRFRSVSAFSPIVAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCE IRCPWGEKAFGHYLGDDREAWRAYDACALLDDGLRLPDLLVDQGDADTFLAEQLRTDLLV EECCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH EACERNGQKAAIRMQPGYDHSYFFISTFMAEHVAWHAERLKA HHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLETLSTIRSHGGTQGVYSHASTTTGTDMTFALFVPDHAPGTKLPVLWYLSGLTCTHAN CHHHHHHHHHCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCEECHHH VMEKGEYRAACAEHGVIFVAPDTSPRGEDVPDDPDGAWDFGLGAGFYVDATVEPWAKHYR HHHCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCHHHHHHH MRSYIEDELPSLVLRNFASADLTRQAITGHSMGGHGALTIGLRNPDRFRSVSAFSPIVAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCE IRCPWGEKAFGHYLGDDREAWRAYDACALLDDGLRLPDLLVDQGDADTFLAEQLRTDLLV EECCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHH EACERNGQKAAIRMQPGYDHSYFFISTFMAEHVAWHAERLKA HHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8892832 [H]