Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487307

Identifier: 103487307

GI number: 103487307

Start: 1921244

End: 1921663

Strand: Reverse

Name: 103487307

Synonym: Sala_1823

Alternate gene names: NA

Gene position: 1921663-1921244 (Counterclockwise)

Preceding gene: 103487308

Following gene: 103487306

Centisome position: 57.45

GC content: 63.57

Gene sequence:

>420_bases
ATGTCATCGCGCTCTAGCCTGTCAGCCGGATGGACCGGCGCCGCCCCCGACGCCGATGCGCTGTTCGCGATGGCCGAAGC
GGCGCTGGAAACCATGCCCGACGTGTTCAGACCGCATATCGAGGGCGTCGTGATTTCGATCGAGGAGTTCGCTGACGACG
AGGTGCTGGCCTCGCTGGGCATCGAACATCCCTATGACCTCACCGGACTCTACGAAGGGCGCCCGCTCACCGAACGCAGC
ATCGGCGAAAGCGGTGGGATGCCCGACCGGGTGACGCTGTACCGCATCCCCATCCTGGTCGAATGGATCGAGGGCGGCGA
ACGGCTCGACTGGCTGGTGCGCCATGTGCTGATCCACGAGATCGGCCATCATTTCGGCTTTTCCGACGACGATATGCACG
CGCTTGAGGATATGGCGTGA

Upstream 100 bases:

>100_bases
CCGATTGCCACGTTGCTCGTCGGGCGCGATATCTCGCATCGCGCCGCTCCTCGCGCCTCGCACTCGGCCAAAATCGTCTC
CGTCACGGTGGGTCAATATC

Downstream 100 bases:

>100_bases
CGGTTCTGCTGGCGCTCGACGGCGTCGCGTGCATCCGCGGCGACCGGCTGGTCTTTGAGGAGCTGTCGCTCGCTCTGAAC
CGCGGCGATGCGCTCTGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSSRSSLSAGWTGAAPDADALFAMAEAALETMPDVFRPHIEGVVISIEEFADDEVLASLGIEHPYDLTGLYEGRPLTERS
IGESGGMPDRVTLYRIPILVEWIEGGERLDWLVRHVLIHEIGHHFGFSDDDMHALEDMA

Sequences:

>Translated_139_residues
MSSRSSLSAGWTGAAPDADALFAMAEAALETMPDVFRPHIEGVVISIEEFADDEVLASLGIEHPYDLTGLYEGRPLTERS
IGESGGMPDRVTLYRIPILVEWIEGGERLDWLVRHVLIHEIGHHFGFSDDDMHALEDMA
>Mature_138_residues
SSRSSLSAGWTGAAPDADALFAMAEAALETMPDVFRPHIEGVVISIEEFADDEVLASLGIEHPYDLTGLYEGRPLTERSI
GESGGMPDRVTLYRIPILVEWIEGGERLDWLVRHVLIHEIGHHFGFSDDDMHALEDMA

Specific function: Unknown

COG id: COG3824

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15347; Mature: 15216

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRSSLSAGWTGAAPDADALFAMAEAALETMPDVFRPHIEGVVISIEEFADDEVLASLG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHCCHHHHHHHC
IEHPYDLTGLYEGRPLTERSIGESGGMPDRVTLYRIPILVEWIEGGERLDWLVRHVLIHE
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEHHHHHEECCCCHHHHHHHHHHHHHH
IGHHFGFSDDDMHALEDMA
HHHHCCCCCCHHHHHHHCC
>Mature Secondary Structure 
SSRSSLSAGWTGAAPDADALFAMAEAALETMPDVFRPHIEGVVISIEEFADDEVLASLG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHCCHHHHHHHC
IEHPYDLTGLYEGRPLTERSIGESGGMPDRVTLYRIPILVEWIEGGERLDWLVRHVLIHE
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEHHHHHEECCCCHHHHHHHHHHHHHH
IGHHFGFSDDDMHALEDMA
HHHHCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA