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The map label for this gene is yfgC [C]

Identifier: 103487279

GI number: 103487279

Start: 1890380

End: 1891921

Strand: Reverse

Name: yfgC [C]

Synonym: Sala_1795

Alternate gene names: 103487279

Gene position: 1891921-1890380 (Counterclockwise)

Preceding gene: 103487280

Following gene: 103487276

Centisome position: 56.56

GC content: 65.5

Gene sequence:

>1542_bases
ATGACAGCAAAGGTGGGAGGCGCGATCATGAGCCGCTTGACAACTGGGACGGTGATTGCCGCGTTGCTGGCGGGTTGCGC
GGCAGCTGGCGGCGGGGGGATGAACGGCACCGCCGATGCGCGGACAAAACCGATCAGGACCGCGACGAGCATTTCGCCCG
CCGAGCGCAAGGAGGGCGACGAGGCGCATCCCCAGCTTGTACAGGATTTCGGCGGGGCCTATGCTGGGCCGCAGGCATCC
TATGTGAACCGGGTGGGGCAAAATATCGCGATCCAGTCGGGCCTGTCGCGGTCGCCCGGCGACTTTACCGTCACTCTGCT
CAACTCGCCGGTAAACAACGCCTTCGCGATTCCCGGCGGCTATGTCTATGTCACGCGGCAGCTGATGGCGCTGATGAACG
ACGAGGCGGAGCTGGCGGGCGTGCTGGGGCACGAGGTCGGCCACGTCGCCGCGCAGCACAGCAAGAAACGTCAGTCGGCG
GCGACGCGCAACTCGATCCTCGGCATTCTCGGCGCCGTTCTGGGCAGCGCGATCGGCGACAATGGCGGATTGCTCGGGGG
GCTGGGCGGGCTGCTCCAGAATAATTCGATGCGGATCGCGCAGCTTGCGACGCTGGGTTTTTCGCGCAGCCAGGAACTCG
AGGCCGACCAGCTCGGCGTCCAGTATCTGCGCAGCGCGGGTTATGATCCGATGGCCTTGTCGACGATGCTCGCGAGCCTT
GCCAACCAGACCAGCCTCGACGCCCGCCTCGCGGGTGGCAATGCGCGCTCGCTCCCCGAATGGGCGAGCACGCACCCCGA
TCCGGCATCGCGCGTGCGCAACGCGCAAACGCTTGCCAACCGCGCGGGCGGTGTCGGCGGCATGCGCAATGCGGACACCT
TTCTGGCGTCGGTCGATGGGGTGCTCTACGGCGACGATCCCGCGCAGGGCGTCGTCGAAGGGCGAAGTTTCCTGCACCCC
GACCTTCGCCTTCGTTTCACCGTCCCCAGCGGTTATGTGATGCAGAATGGCACCACGGCGGTGTCGATCAGCGGCAATGG
CGGCCAGGCGCAGTTCTCGACCGCTCCCTACAGTGGCGATATGAACGCCTATATCGCCTCGGTGTTTCGTGCAGTTGCGG
GCAATCTGTCGATCAGCCCCGGAACGATCCAGCGCACGACCGTGAACGGGATCCCGGCCTATTATTCGACCGCGCGCGTC
AACAGCCAGTCGGGGCCGGTCGATGTCACTGTCTTTGCCTATGAATTTTCGGGCAGTCAGGCCTTTCATTTCGTGGCGCT
GACGCAGGCCGGACGTGGCGGCGTCTTCGATCCGATGTTCGCCAGCGTGCGGCGATTGAGCGCAGCCGAAGCGGCCGCGA
TCCGGCCGCGGCGGGTCGATGTCGTCACGGTGGGCCGCGGCGACACGGTGGCCAGTCTGGCGCGGCGCATGGCCTATGAT
GATTATCAGACGGAGCGGTTTCAGGTGCTCAACCGGCTGACGTCGTCAAGCCGCCTGACGCCGGGGCAGAAGGTGAAAAT
CGTCGTTTATTCGGGCCGGTAG

Upstream 100 bases:

>100_bases
GGAACCGTTCCGCCCTGTCAGCGTTCCCTTTATCGGATACAGGGTAAACGACGGTCGTGGCGGTCGCTTATTTTTTGCAA
TGACAGGGATATCCCGGAGG

Downstream 100 bases:

>100_bases
GCGTGGCGCATGAAAAAGGGCGGTGGGATGACCCACCGCCCCTTTCTTTTCGATCGACACGCCGCAGGAGCGGCGTGTTC
GACGCGCGAGCTTACTTGTT

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 512

Protein sequence:

>513_residues
MTAKVGGAIMSRLTTGTVIAALLAGCAAAGGGGMNGTADARTKPIRTATSISPAERKEGDEAHPQLVQDFGGAYAGPQAS
YVNRVGQNIAIQSGLSRSPGDFTVTLLNSPVNNAFAIPGGYVYVTRQLMALMNDEAELAGVLGHEVGHVAAQHSKKRQSA
ATRNSILGILGAVLGSAIGDNGGLLGGLGGLLQNNSMRIAQLATLGFSRSQELEADQLGVQYLRSAGYDPMALSTMLASL
ANQTSLDARLAGGNARSLPEWASTHPDPASRVRNAQTLANRAGGVGGMRNADTFLASVDGVLYGDDPAQGVVEGRSFLHP
DLRLRFTVPSGYVMQNGTTAVSISGNGGQAQFSTAPYSGDMNAYIASVFRAVAGNLSISPGTIQRTTVNGIPAYYSTARV
NSQSGPVDVTVFAYEFSGSQAFHFVALTQAGRGGVFDPMFASVRRLSAAEAAAIRPRRVDVVTVGRGDTVASLARRMAYD
DYQTERFQVLNRLTSSSRLTPGQKVKIVVYSGR

Sequences:

>Translated_513_residues
MTAKVGGAIMSRLTTGTVIAALLAGCAAAGGGGMNGTADARTKPIRTATSISPAERKEGDEAHPQLVQDFGGAYAGPQAS
YVNRVGQNIAIQSGLSRSPGDFTVTLLNSPVNNAFAIPGGYVYVTRQLMALMNDEAELAGVLGHEVGHVAAQHSKKRQSA
ATRNSILGILGAVLGSAIGDNGGLLGGLGGLLQNNSMRIAQLATLGFSRSQELEADQLGVQYLRSAGYDPMALSTMLASL
ANQTSLDARLAGGNARSLPEWASTHPDPASRVRNAQTLANRAGGVGGMRNADTFLASVDGVLYGDDPAQGVVEGRSFLHP
DLRLRFTVPSGYVMQNGTTAVSISGNGGQAQFSTAPYSGDMNAYIASVFRAVAGNLSISPGTIQRTTVNGIPAYYSTARV
NSQSGPVDVTVFAYEFSGSQAFHFVALTQAGRGGVFDPMFASVRRLSAAEAAAIRPRRVDVVTVGRGDTVASLARRMAYD
DYQTERFQVLNRLTSSSRLTPGQKVKIVVYSGR
>Mature_512_residues
TAKVGGAIMSRLTTGTVIAALLAGCAAAGGGGMNGTADARTKPIRTATSISPAERKEGDEAHPQLVQDFGGAYAGPQASY
VNRVGQNIAIQSGLSRSPGDFTVTLLNSPVNNAFAIPGGYVYVTRQLMALMNDEAELAGVLGHEVGHVAAQHSKKRQSAA
TRNSILGILGAVLGSAIGDNGGLLGGLGGLLQNNSMRIAQLATLGFSRSQELEADQLGVQYLRSAGYDPMALSTMLASLA
NQTSLDARLAGGNARSLPEWASTHPDPASRVRNAQTLANRAGGVGGMRNADTFLASVDGVLYGDDPAQGVVEGRSFLHPD
LRLRFTVPSGYVMQNGTTAVSISGNGGQAQFSTAPYSGDMNAYIASVFRAVAGNLSISPGTIQRTTVNGIPAYYSTARVN
SQSGPVDVTVFAYEFSGSQAFHFVALTQAGRGGVFDPMFASVRRLSAAEAAAIRPRRVDVVTVGRGDTVASLARRMAYDD
YQTERFQVLNRLTSSSRLTPGQKVKIVVYSGR

Specific function: Unknown

COG id: COG4784

COG function: function code R; Putative Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=223, Percent_Identity=30.0448430493274, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI87082185, Length=270, Percent_Identity=28.8888888888889, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 53426; Mature: 53295

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKVGGAIMSRLTTGTVIAALLAGCAAAGGGGMNGTADARTKPIRTATSISPAERKEGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHCCCC
EAHPQLVQDFGGAYAGPQASYVNRVGQNIAIQSGLSRSPGDFTVTLLNSPVNNAFAIPGG
CCHHHHHHHHCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCEEEEEECCCCCCEEECCCC
YVYVTRQLMALMNDEAELAGVLGHEVGHVAAQHSKKRQSAATRNSILGILGAVLGSAIGD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NGGLLGGLGGLLQNNSMRIAQLATLGFSRSQELEADQLGVQYLRSAGYDPMALSTMLASL
CCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
ANQTSLDARLAGGNARSLPEWASTHPDPASRVRNAQTLANRAGGVGGMRNADTFLASVDG
HCCCCCCEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
VLYGDDPAQGVVEGRSFLHPDLRLRFTVPSGYVMQNGTTAVSISGNGGQAQFSTAPYSGD
EEECCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECCCEEEEEECCCCCEEEECCCCCCC
MNAYIASVFRAVAGNLSISPGTIQRTTVNGIPAYYSTARVNSQSGPVDVTVFAYEFSGSQ
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHEEEECCCCCCEEEEEEEEEECCCC
AFHFVALTQAGRGGVFDPMFASVRRLSAAEAAAIRPRRVDVVTVGRGDTVASLARRMAYD
EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHC
DYQTERFQVLNRLTSSSRLTPGQKVKIVVYSGR
CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
TAKVGGAIMSRLTTGTVIAALLAGCAAAGGGGMNGTADARTKPIRTATSISPAERKEGD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHCCCC
EAHPQLVQDFGGAYAGPQASYVNRVGQNIAIQSGLSRSPGDFTVTLLNSPVNNAFAIPGG
CCHHHHHHHHCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCEEEEEECCCCCCEEECCCC
YVYVTRQLMALMNDEAELAGVLGHEVGHVAAQHSKKRQSAATRNSILGILGAVLGSAIGD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NGGLLGGLGGLLQNNSMRIAQLATLGFSRSQELEADQLGVQYLRSAGYDPMALSTMLASL
CCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
ANQTSLDARLAGGNARSLPEWASTHPDPASRVRNAQTLANRAGGVGGMRNADTFLASVDG
HCCCCCCEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
VLYGDDPAQGVVEGRSFLHPDLRLRFTVPSGYVMQNGTTAVSISGNGGQAQFSTAPYSGD
EEECCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECCCEEEEEECCCCCEEEECCCCCCC
MNAYIASVFRAVAGNLSISPGTIQRTTVNGIPAYYSTARVNSQSGPVDVTVFAYEFSGSQ
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHEEEECCCCCCEEEEEEEEEECCCC
AFHFVALTQAGRGGVFDPMFASVRRLSAAEAAAIRPRRVDVVTVGRGDTVASLARRMAYD
EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHC
DYQTERFQVLNRLTSSSRLTPGQKVKIVVYSGR
CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]