| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is accA
Identifier: 103487280
GI number: 103487280
Start: 1892029
End: 1892976
Strand: Reverse
Name: accA
Synonym: Sala_1796
Alternate gene names: 103487280
Gene position: 1892976-1892029 (Counterclockwise)
Preceding gene: 103487281
Following gene: 103487279
Centisome position: 56.59
GC content: 65.4
Gene sequence:
>948_bases ATGACAGCCTTTCTGGACTTCGAAAAACAGGTCGCCGCACTCGATCGACAGATTGCCGAACTGCGCGAAATGGGGGATGA TCCCACGCTCGATATCGAGGGCGACATCGCCAGGCTGGAGGACAAGTCCGCCAAATTGCTGCGCGACATCTATGCCAGGC TGACGCCGTGGCAGAAAACGCAGGTCGCGCGTCACCCCGACCGGCCGCATTTCAAACATTATGTCGCGGGCCTGTTCGAC GACTGGATGCCGCTCGCGGGCGACCGCAATTTTGCCGACGATCAGGCGATTCTGGGCGGGCTGGCGCGGTTCCGGGGCCG CCGCGTGATGGTGATCGGCCATGAAAAGGGCGACGATATTCCGTCGCGGATGAAGCATAATTTCGGCATGGCAAAGCCCG AAGGCTATCGAAAGGCGATCCGGCTGATGCAGCTTGCCGACCGCTTCGGCCTGCCCGTGATAACGCTGGTCGATACGTCG GGCGCCTTTCCCGGCATCCAGGCCGAGGAGCGCGGACAGGCCGAAGCGATCGCGCGGTCGACCGAACAGTGCCTTGCACT GGGCGTGCCGATGGTCGCGGCGGTGGTCGGCGAGGGCGGTTCGGGCGGCGCGATCGCGCTCGCCGCGGCAAACCGCGTGC TGATGTTCGAGCACGCCGTCTATTCGGTGATCTCTCCCGAGGGTTGCGCCTCGATCCTGTGGCGCACCTCGGACAAGGCG GCGGAGGCGGCGGCAGCGATGAAGATGTCGGCGCAGGATCTGCTGGCGCTGAAGATCATCGACCGGATCGTTCCCGAACC CGTCGGCGGCGCGCATCGCGCGCCCGAGGCTGCGATTGCCGCGCTCGGCGATGCCCTCGAACAGGAACTGAACGGCCTGT CGGGCCTGCCGCGCGACACATTGCTTGCCGCGCGAGAGGAAAAGTTCCTCGCGATGGGCCGCGCCTGA
Upstream 100 bases:
>100_bases TGTCGACAGCCGCCGCCTCGTCGAACTGGTCAACCGGCGGCACCCGCTGGCGCATATGGATGACGTTGACCTGACGGCGC CTTCGGCCTAGCGACGGCGC
Downstream 100 bases:
>100_bases CGAGAGCGGAACCGTTCCGCCCTGTCAGCGTTCCCTTTATCGGATACAGGGTAAACGACGGTCGTGGCGGTCGCTTATTT TTTGCAATGACAGGGATATC
Product: acetyl-CoA carboxylase carboxyltransferase subunit alpha
Products: NA
Alternate protein names: ACCase subunit alpha; Acetyl-CoA carboxylase carboxyltransferase subunit alpha
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MTAFLDFEKQVAALDRQIAELREMGDDPTLDIEGDIARLEDKSAKLLRDIYARLTPWQKTQVARHPDRPHFKHYVAGLFD DWMPLAGDRNFADDQAILGGLARFRGRRVMVIGHEKGDDIPSRMKHNFGMAKPEGYRKAIRLMQLADRFGLPVITLVDTS GAFPGIQAEERGQAEAIARSTEQCLALGVPMVAAVVGEGGSGGAIALAAANRVLMFEHAVYSVISPEGCASILWRTSDKA AEAAAAMKMSAQDLLALKIIDRIVPEPVGGAHRAPEAAIAALGDALEQELNGLSGLPRDTLLAAREEKFLAMGRA
Sequences:
>Translated_315_residues MTAFLDFEKQVAALDRQIAELREMGDDPTLDIEGDIARLEDKSAKLLRDIYARLTPWQKTQVARHPDRPHFKHYVAGLFD DWMPLAGDRNFADDQAILGGLARFRGRRVMVIGHEKGDDIPSRMKHNFGMAKPEGYRKAIRLMQLADRFGLPVITLVDTS GAFPGIQAEERGQAEAIARSTEQCLALGVPMVAAVVGEGGSGGAIALAAANRVLMFEHAVYSVISPEGCASILWRTSDKA AEAAAAMKMSAQDLLALKIIDRIVPEPVGGAHRAPEAAIAALGDALEQELNGLSGLPRDTLLAAREEKFLAMGRA >Mature_314_residues TAFLDFEKQVAALDRQIAELREMGDDPTLDIEGDIARLEDKSAKLLRDIYARLTPWQKTQVARHPDRPHFKHYVAGLFDD WMPLAGDRNFADDQAILGGLARFRGRRVMVIGHEKGDDIPSRMKHNFGMAKPEGYRKAIRLMQLADRFGLPVITLVDTSG AFPGIQAEERGQAEAIARSTEQCLALGVPMVAAVVGEGGSGGAIALAAANRVLMFEHAVYSVISPEGCASILWRTSDKAA EAAAAMKMSAQDLLALKIIDRIVPEPVGGAHRAPEAAIAALGDALEQELNGLSGLPRDTLLAAREEKFLAMGRA
Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-Co
COG id: COG0825
COG function: function code I; Acetyl-CoA carboxylase alpha subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AccA family
Homologues:
Organism=Escherichia coli, GI1786382, Length=315, Percent_Identity=51.7460317460318, Blast_Score=319, Evalue=1e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACCA_SPHAL (Q1GS64)
Other databases:
- EMBL: CP000356 - RefSeq: YP_616841.1 - ProteinModelPortal: Q1GS64 - SMR: Q1GS64 - GeneID: 4082264 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_1796 - NMPDR: fig|317655.9.peg.1726 - HOGENOM: HBG286557 - OMA: QLTKDIY - ProtClustDB: PRK05724 - BioCyc: SALA317655:SALA_1796-MONOMER - BRENDA: 6.4.1.2 - HAMAP: MF_00823 - InterPro: IPR001095 - InterPro: IPR011763 - PANTHER: PTHR22855:SF3 - PRINTS: PR01069 - TIGRFAMs: TIGR00513
Pfam domain/function: PF03255 ACCA
EC number: =6.4.1.2
Molecular weight: Translated: 34105; Mature: 33973
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS50989 COA_CT_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFLDFEKQVAALDRQIAELREMGDDPTLDIEGDIARLEDKSAKLLRDIYARLTPWQKT CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCHHH QVARHPDRPHFKHYVAGLFDDWMPLAGDRNFADDQAILGGLARFRGRRVMVIGHEKGDDI HHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCH PSRMKHNFGMAKPEGYRKAIRLMQLADRFGLPVITLVDTSGAFPGIQAEERGQAEAIARS HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHCCHHHHHHHH TEQCLALGVPMVAAVVGEGGSGGAIALAAANRVLMFEHAVYSVISPEGCASILWRTSDKA HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHH AEAAAAMKMSAQDLLALKIIDRIVPEPVGGAHRAPEAAIAALGDALEQELNGLSGLPRDT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH LLAAREEKFLAMGRA HHHHHHHHHHHCCCC >Mature Secondary Structure TAFLDFEKQVAALDRQIAELREMGDDPTLDIEGDIARLEDKSAKLLRDIYARLTPWQKT CCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCHHH QVARHPDRPHFKHYVAGLFDDWMPLAGDRNFADDQAILGGLARFRGRRVMVIGHEKGDDI HHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCH PSRMKHNFGMAKPEGYRKAIRLMQLADRFGLPVITLVDTSGAFPGIQAEERGQAEAIARS HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHCCHHHHHHHH TEQCLALGVPMVAAVVGEGGSGGAIALAAANRVLMFEHAVYSVISPEGCASILWRTSDKA HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHH AEAAAAMKMSAQDLLALKIIDRIVPEPVGGAHRAPEAAIAALGDALEQELNGLSGLPRDT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH LLAAREEKFLAMGRA HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA