Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487235

Identifier: 103487235

GI number: 103487235

Start: 1842156

End: 1843028

Strand: Reverse

Name: 103487235

Synonym: Sala_1750

Alternate gene names: NA

Gene position: 1843028-1842156 (Counterclockwise)

Preceding gene: 103487236

Following gene: 103487234

Centisome position: 55.1

GC content: 69.07

Gene sequence:

>873_bases
GTGAGCGAACCCCGGGAGCATCGGCTGGAAACGCCGGACGGTGCGATCTGCTGGTTCGAATGGGGTGAGCGCGGCGAGGC
CGCTTCGCTGCTCCTGCTTCACGCCACCGGCTTTCACGCGCGGCTCTGGGATCAGGTCGTCGCGGCGCTGCCCGCGGGAA
CGCATGTTATCGCGCCCGATCACCGCGGCCATGGCCGCAGCTATCGCCCCGCAACGCTCGCCGACTGGGGGGCGACCGCC
GATGCGCTGCTCCCGCTCCTCGACGGGTTTGGCGGACGCCCGCTTGTCGGTTGCGGACACAGCATGGGTGCCTATGTGCT
GACGCGGCTTGCGTCGCAGCGTCCGGCGGCCCTCCGTCACCTCGTCCTGATCGATCCCGTTATCATGGAACCCGCGCTTT
ACGAAGGCGAGAGCACCAAACCGATTCCCGATCCCGCCGACCATCCGGTCGCGCGGCGACGCAATGCGTGGACCGATGCC
GATGAGATGCGTGCGCGTTTCGCCGACCGGCCGCCCTATGCGAATTGGGATCCGCGCGTGCTGGCCGATTATTGCACCCA
TGGCCTGCTTCCCGCGGCGGCCGGCGAAGGGTTCGAACTCGCCTGTCCGCCCGCGCTCGAGGCGTCGGTCTATCAGAATG
CGCTGCGCACCAGCCCGCACGAATGGCTACGCTATCTGTCGGTGCCGTCGACGCTGATTCGCGCCCCGACCGGCGAGCGT
GGCGGCCCGCTCGATTTTTCGCTGAGCCCGACCTGGACGGGCCTTGGCCCCGCGATCGGCGCCGGGCGCGACGAATTGTG
GCCGGAGCATAGCCATTTCATCCCGATGGAAGCGCCCGCGCGCGTCGCGGCGTTGCTCGCCGGGCTGCTCTGA

Upstream 100 bases:

>100_bases
GAAGGCCGAGGACCTGATGATGGGTGCCCCGGCGCCGGTATCAGAGAAGCAGCTCAGGGAACTCGGAATCCGCATTGTCG
ACGGTCCGAAGAGCTAAAGC

Downstream 100 bases:

>100_bases
TTGTCCAGAGGGTAAGGAAGCCCGCCGATATTGTCCCGGAACATGACATCGGCGTATCGTCCTTGGTAGGACGCGCCAGC
TTGCGCTAGGATCGGCGCAT

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Fold Superfamily Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein; Conserved Hydrolases Or Acyltransferase

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSEPREHRLETPDGAICWFEWGERGEAASLLLLHATGFHARLWDQVVAALPAGTHVIAPDHRGHGRSYRPATLADWGATA
DALLPLLDGFGGRPLVGCGHSMGAYVLTRLASQRPAALRHLVLIDPVIMEPALYEGESTKPIPDPADHPVARRRNAWTDA
DEMRARFADRPPYANWDPRVLADYCTHGLLPAAAGEGFELACPPALEASVYQNALRTSPHEWLRYLSVPSTLIRAPTGER
GGPLDFSLSPTWTGLGPAIGAGRDELWPEHSHFIPMEAPARVAALLAGLL

Sequences:

>Translated_290_residues
MSEPREHRLETPDGAICWFEWGERGEAASLLLLHATGFHARLWDQVVAALPAGTHVIAPDHRGHGRSYRPATLADWGATA
DALLPLLDGFGGRPLVGCGHSMGAYVLTRLASQRPAALRHLVLIDPVIMEPALYEGESTKPIPDPADHPVARRRNAWTDA
DEMRARFADRPPYANWDPRVLADYCTHGLLPAAAGEGFELACPPALEASVYQNALRTSPHEWLRYLSVPSTLIRAPTGER
GGPLDFSLSPTWTGLGPAIGAGRDELWPEHSHFIPMEAPARVAALLAGLL
>Mature_289_residues
SEPREHRLETPDGAICWFEWGERGEAASLLLLHATGFHARLWDQVVAALPAGTHVIAPDHRGHGRSYRPATLADWGATAD
ALLPLLDGFGGRPLVGCGHSMGAYVLTRLASQRPAALRHLVLIDPVIMEPALYEGESTKPIPDPADHPVARRRNAWTDAD
EMRARFADRPPYANWDPRVLADYCTHGLLPAAAGEGFELACPPALEASVYQNALRTSPHEWLRYLSVPSTLIRAPTGERG
GPLDFSLSPTWTGLGPAIGAGRDELWPEHSHFIPMEAPARVAALLAGLL

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31488; Mature: 31357

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPREHRLETPDGAICWFEWGERGEAASLLLLHATGFHARLWDQVVAALPAGTHVIAPD
CCCCHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCC
HRGHGRSYRPATLADWGATADALLPLLDGFGGRPLVGCGHSMGAYVLTRLASQRPAALRH
CCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCHHHHHH
LVLIDPVIMEPALYEGESTKPIPDPADHPVARRRNAWTDADEMRARFADRPPYANWDPRV
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHH
LADYCTHGLLPAAAGEGFELACPPALEASVYQNALRTSPHEWLRYLSVPSTLIRAPTGER
HHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCCCCC
GGPLDFSLSPTWTGLGPAIGAGRDELWPEHSHFIPMEAPARVAALLAGLL
CCCCCEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SEPREHRLETPDGAICWFEWGERGEAASLLLLHATGFHARLWDQVVAALPAGTHVIAPD
CCCHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCC
HRGHGRSYRPATLADWGATADALLPLLDGFGGRPLVGCGHSMGAYVLTRLASQRPAALRH
CCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCHHHHHH
LVLIDPVIMEPALYEGESTKPIPDPADHPVARRRNAWTDADEMRARFADRPPYANWDPRV
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHH
LADYCTHGLLPAAAGEGFELACPPALEASVYQNALRTSPHEWLRYLSVPSTLIRAPTGER
HHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCCCCC
GGPLDFSLSPTWTGLGPAIGAGRDELWPEHSHFIPMEAPARVAALLAGLL
CCCCCEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA