| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is cheB1 [H]
Identifier: 103487222
GI number: 103487222
Start: 1829693
End: 1830805
Strand: Reverse
Name: cheB1 [H]
Synonym: Sala_1737
Alternate gene names: 103487222
Gene position: 1830805-1829693 (Counterclockwise)
Preceding gene: 103487223
Following gene: 103487221
Centisome position: 54.73
GC content: 69.72
Gene sequence:
>1113_bases ATGGCGCTTGCGCAACCCCTGGTTCCCGATCCCGATCCGCCGGCGCGGACGGTGAGGGTGATGCTGGTCGACGACAGCCT GGTCGTGCGCAGCATCCTCGAGCGAATCGTCGAAACGCGGCCGGGCTTGCATATCTGCGCATCGGTCGCTTCGGCGTCCG ACGCGCTCGATTATCTGGCGCGCGAAACGGTCGACGTCGTGGTGCTCGACATCGAAATGCCGGGGATGAACGGCATCGAT GCGCTGCCGCACATCCTGGAGCGCGCGGCCCAGGCGCGCGTTCTGATTCTCTCCTCAAACTGTGTCGAGGGCGGTCCCGC GGCGGTCGAGGCGCTGGCGCTCGGCGCGAGCGACACGCTCGCGAAACCGGGGCGCGGCAGCTTTTCGGGCCGCTTTGCCG AGGTGCTGACCGACCGCATCCTGACGCTCGGCAACCAGCGCGAGTTTCCGGCTCCCGTGCCCGTCGCGCAGCGGCGCGCG CGCGCGCCGGTCTCGATGGTCGTCGATACCGACCAGCCGATCGATTGCATCGCGGTCGCCGCCTCGACGGGCGGCATTCC GGCCTTTACCAGCTTCCTTGCCAATCTCGACCCGCGGGTGACCGCGCCGATCCTGCTGACGCAGCATCTGCCCGACGCCT TCATGGCGTTTTATGCGCGGCAGATCGGCATGATGACGACGCGGCGCGTCCATGTGGCGGCCGCCGGCATGGCGGTCGAG CCGGGGCATATCTATCTGGCGCCGGGCGACGCGCATCTGATCGTGATCGCCAATGGCGCGCGCCGCGAAATCGCGCTCGA TCGCCGCCCCGCCGACAACGGTTGCTGCCCGTCGGCCGACCCGATGCTCGATTCGGTGGCCGAAACCTATGGTAAGAGCG GTGTCGCCGTGATCCTGAGCGGGATGGGACGCGATGGGGCGGCGGGCGCGGCGCGGGTCAAGTCGGCGGGCGGCACGGTC TTTGCCCAGGCCCCCGAAAGCTGCGTGATCTGGGGAATGCCCGGCGCGGTCGCCAAGGCGGGGATCGCCGCGGCGACGCT CAACCCCGACGCGATCGCGCTGATGCTGGGCAGCTTCCTGCCGGGTCGCGCCGAGGGGCGACCGCAGCCATGA
Upstream 100 bases:
>100_bases GGCGGGCGCGGACGAATATGTGATGAAGCCGTTCGACCGCGAAACGCTGGAAGGAAAGCTGCAGCTCGTCGGCATCGCCT GACGCAAGGGGCCCGGTTCG
Downstream 100 bases:
>100_bases TGGGAGCGAGCGCCAGCGAATCGGCCTATCGTGTGCTGATGGGGGTGCTCGAATCGCGGACTGGCCAGACGCTCTCGCCG AGCCGCATCTGGCGCATCGA
Product: response regulator receiver modulated CheB methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MALAQPLVPDPDPPARTVRVMLVDDSLVVRSILERIVETRPGLHICASVASASDALDYLARETVDVVVLDIEMPGMNGID ALPHILERAAQARVLILSSNCVEGGPAAVEALALGASDTLAKPGRGSFSGRFAEVLTDRILTLGNQREFPAPVPVAQRRA RAPVSMVVDTDQPIDCIAVAASTGGIPAFTSFLANLDPRVTAPILLTQHLPDAFMAFYARQIGMMTTRRVHVAAAGMAVE PGHIYLAPGDAHLIVIANGARREIALDRRPADNGCCPSADPMLDSVAETYGKSGVAVILSGMGRDGAAGAARVKSAGGTV FAQAPESCVIWGMPGAVAKAGIAAATLNPDAIALMLGSFLPGRAEGRPQP
Sequences:
>Translated_370_residues MALAQPLVPDPDPPARTVRVMLVDDSLVVRSILERIVETRPGLHICASVASASDALDYLARETVDVVVLDIEMPGMNGID ALPHILERAAQARVLILSSNCVEGGPAAVEALALGASDTLAKPGRGSFSGRFAEVLTDRILTLGNQREFPAPVPVAQRRA RAPVSMVVDTDQPIDCIAVAASTGGIPAFTSFLANLDPRVTAPILLTQHLPDAFMAFYARQIGMMTTRRVHVAAAGMAVE PGHIYLAPGDAHLIVIANGARREIALDRRPADNGCCPSADPMLDSVAETYGKSGVAVILSGMGRDGAAGAARVKSAGGTV FAQAPESCVIWGMPGAVAKAGIAAATLNPDAIALMLGSFLPGRAEGRPQP >Mature_369_residues ALAQPLVPDPDPPARTVRVMLVDDSLVVRSILERIVETRPGLHICASVASASDALDYLARETVDVVVLDIEMPGMNGIDA LPHILERAAQARVLILSSNCVEGGPAAVEALALGASDTLAKPGRGSFSGRFAEVLTDRILTLGNQREFPAPVPVAQRRAR APVSMVVDTDQPIDCIAVAASTGGIPAFTSFLANLDPRVTAPILLTQHLPDAFMAFYARQIGMMTTRRVHVAAAGMAVEP GHIYLAPGDAHLIVIANGARREIALDRRPADNGCCPSADPMLDSVAETYGKSGVAVILSGMGRDGAAGAARVKSAGGTVF AQAPESCVIWGMPGAVAKAGIAAATLNPDAIALMLGSFLPGRAEGRPQP
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=323, Percent_Identity=34.3653250773994, Blast_Score=163, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 38381; Mature: 38250
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAQPLVPDPDPPARTVRVMLVDDSLVVRSILERIVETRPGLHICASVASASDALDYLA CCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RETVDVVVLDIEMPGMNGIDALPHILERAAQARVLILSSNCVEGGPAAVEALALGASDTL HCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHCCCCCCC AKPGRGSFSGRFAEVLTDRILTLGNQREFPAPVPVAQRRARAPVSMVVDTDQPIDCIAVA CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCEEEEEE ASTGGIPAFTSFLANLDPRVTAPILLTQHLPDAFMAFYARQIGMMTTRRVHVAAAGMAVE ECCCCHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHCEEEEEECCEEEC PGHIYLAPGDAHLIVIANGARREIALDRRPADNGCCPSADPMLDSVAETYGKSGVAVILS CCEEEEECCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE GMGRDGAAGAARVKSAGGTVFAQAPESCVIWGMPGAVAKAGIAAATLNPDAIALMLGSFL CCCCCCCCCHHHHHCCCCEEEEECCCCEEEECCCHHHHHCCEEEEECCCHHHHHHHHHCC PGRAEGRPQP CCCCCCCCCC >Mature Secondary Structure ALAQPLVPDPDPPARTVRVMLVDDSLVVRSILERIVETRPGLHICASVASASDALDYLA CCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RETVDVVVLDIEMPGMNGIDALPHILERAAQARVLILSSNCVEGGPAAVEALALGASDTL HCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHCCCCCCC AKPGRGSFSGRFAEVLTDRILTLGNQREFPAPVPVAQRRARAPVSMVVDTDQPIDCIAVA CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCEEEEEE ASTGGIPAFTSFLANLDPRVTAPILLTQHLPDAFMAFYARQIGMMTTRRVHVAAAGMAVE ECCCCHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHCEEEEEECCEEEC PGHIYLAPGDAHLIVIANGARREIALDRRPADNGCCPSADPMLDSVAETYGKSGVAVILS CCEEEEECCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE GMGRDGAAGAARVKSAGGTVFAQAPESCVIWGMPGAVAKAGIAAATLNPDAIALMLGSFL CCCCCCCCCHHHHHCCCCEEEEECCCCEEEECCCHHHHHCCEEEEECCCHHHHHHHHHCC PGRAEGRPQP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA