| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is cheR1 [H]
Identifier: 103487221
GI number: 103487221
Start: 1828824
End: 1829696
Strand: Reverse
Name: cheR1 [H]
Synonym: Sala_1736
Alternate gene names: 103487221
Gene position: 1829696-1828824 (Counterclockwise)
Preceding gene: 103487222
Following gene: 103487220
Centisome position: 54.7
GC content: 65.29
Gene sequence:
>873_bases ATGATGGGAGCGAGCGCCAGCGAATCGGCCTATCGTGTGCTGATGGGGGTGCTCGAATCGCGGACTGGCCAGACGCTCTC GCCGAGCCGCATCTGGCGCATCGAAATGTCGCTGAAACCGGTGATGCAGCGCCATGGCATCACCGATCTCGACGCGCTCG TCGGCGCGCTGGTCACGGCAAACAGCCGCCAGCTGCTCGATGACACGGTCGACGCGATGTTGAACAACGAAACCTATTTT TATCGGGAACACAGTGTCTTTGACGATATAGCTGCGACAGCACTCGAACATTTGCGGGCGGTCAATGCCGACCGGCGGCG GCTCACCATATGGCATTGCGGGGTTTCGACGGGGCAGGAAGCCTATTCGATGGCGATGCTGATCGCCGAACAGGGCGCCA GATGGGCAGGGTGGCAGATCGACATCGTCGGCACCGACGTCAGCCATCAGGCGATCGCGCGCGCGCGCGTTGGCCTTTAC AGTCAGTTCGAGATACAGCGCGGGCTGCCGGTGCATCGCATGGTGCGCTGGTTCGACCAGGCGGAGGGCGGATGGCTGGC CAAGGCCGACCTGCGCCGCCGGATCGACTTTTCGGTGCAGAACATGCTGACCGACCGACCGCCGCTGGCGTCGGCCGCCG ACCTCATCTTCTGCCGCAACCTGCTGCTCTATTTCTCGCCGTCAATGCGGCAGAAGGCGTTCGCGCGGCTGCGCGCGGTC GCGGCGCCGCAAAGTTTCCTCGTGCTCGGCGCGGGCGAGACGGTGCTGGGCCAGACCGATCAGTTCGTGGCAAGTCCGCG ATTGCGCGGGCTTTACGAACCCGCCGACCAGCCGGCGCGGCGCCCCGACACCGCGCGGTCGATCGCCGCCTGA
Upstream 100 bases:
>100_bases TCGCCAAGGCGGGGATCGCCGCGGCGACGCTCAACCCCGACGCGATCGCGCTGATGCTGGGCAGCTTCCTGCCGGGTCGC GCCGAGGGGCGACCGCAGCC
Downstream 100 bases:
>100_bases CCTTGCTTTTTGTCCCCCGCTGGCGCAAGCGACGGTCAGGCAGCCACAGCACGGGCCCAATAAGCGCATGAGCGATTTTG TCGAACGCTGGTCCCCCAAT
Product: MCP methyltransferase, CheR-type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MMGASASESAYRVLMGVLESRTGQTLSPSRIWRIEMSLKPVMQRHGITDLDALVGALVTANSRQLLDDTVDAMLNNETYF YREHSVFDDIAATALEHLRAVNADRRRLTIWHCGVSTGQEAYSMAMLIAEQGARWAGWQIDIVGTDVSHQAIARARVGLY SQFEIQRGLPVHRMVRWFDQAEGGWLAKADLRRRIDFSVQNMLTDRPPLASAADLIFCRNLLLYFSPSMRQKAFARLRAV AAPQSFLVLGAGETVLGQTDQFVASPRLRGLYEPADQPARRPDTARSIAA
Sequences:
>Translated_290_residues MMGASASESAYRVLMGVLESRTGQTLSPSRIWRIEMSLKPVMQRHGITDLDALVGALVTANSRQLLDDTVDAMLNNETYF YREHSVFDDIAATALEHLRAVNADRRRLTIWHCGVSTGQEAYSMAMLIAEQGARWAGWQIDIVGTDVSHQAIARARVGLY SQFEIQRGLPVHRMVRWFDQAEGGWLAKADLRRRIDFSVQNMLTDRPPLASAADLIFCRNLLLYFSPSMRQKAFARLRAV AAPQSFLVLGAGETVLGQTDQFVASPRLRGLYEPADQPARRPDTARSIAA >Mature_290_residues MMGASASESAYRVLMGVLESRTGQTLSPSRIWRIEMSLKPVMQRHGITDLDALVGALVTANSRQLLDDTVDAMLNNETYF YREHSVFDDIAATALEHLRAVNADRRRLTIWHCGVSTGQEAYSMAMLIAEQGARWAGWQIDIVGTDVSHQAIARARVGLY SQFEIQRGLPVHRMVRWFDQAEGGWLAKADLRRRIDFSVQNMLTDRPPLASAADLIFCRNLLLYFSPSMRQKAFARLRAV AAPQSFLVLGAGETVLGQTDQFVASPRLRGLYEPADQPARRPDTARSIAA
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=253, Percent_Identity=24.5059288537549, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 32350; Mature: 32350
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGASASESAYRVLMGVLESRTGQTLSPSRIWRIEMSLKPVMQRHGITDLDALVGALVTA CCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHCCCCHHHHHHHHHHCC NSRQLLDDTVDAMLNNETYFYREHSVFDDIAATALEHLRAVNADRRRLTIWHCGVSTGQE CCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHH AYSMAMLIAEQGARWAGWQIDIVGTDVSHQAIARARVGLYSQFEIQRGLPVHRMVRWFDQ HHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHH AEGGWLAKADLRRRIDFSVQNMLTDRPPLASAADLIFCRNLLLYFSPSMRQKAFARLRAV CCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AAPQSFLVLGAGETVLGQTDQFVASPRLRGLYEPADQPARRPDTARSIAA HCCCEEEEEECCCHHHCCCHHHHHCCHHCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MMGASASESAYRVLMGVLESRTGQTLSPSRIWRIEMSLKPVMQRHGITDLDALVGALVTA CCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHCCCCHHHHHHHHHHCC NSRQLLDDTVDAMLNNETYFYREHSVFDDIAATALEHLRAVNADRRRLTIWHCGVSTGQE CCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHH AYSMAMLIAEQGARWAGWQIDIVGTDVSHQAIARARVGLYSQFEIQRGLPVHRMVRWFDQ HHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHH AEGGWLAKADLRRRIDFSVQNMLTDRPPLASAADLIFCRNLLLYFSPSMRQKAFARLRAV CCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AAPQSFLVLGAGETVLGQTDQFVASPRLRGLYEPADQPARRPDTARSIAA HCCCEEEEEECCCHHHCCCHHHHHCCHHCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301; 10400589 [H]