Click here to switch to the map view.

The map label for this gene is recA [H]

Identifier: 103487210

GI number: 103487210

Start: 1814454

End: 1815536

Strand: Reverse

Name: recA [H]

Synonym: Sala_1725

Alternate gene names: 103487210

Gene position: 1815536-1814454 (Counterclockwise)

Preceding gene: 103487211

Following gene: 103487209

Centisome position: 54.27

GC content: 63.25

Gene sequence:

>1083_bases
ATGGCCGGACAATTGTCACTCGTCGAATCGGGGAAAGCAGTGAACGGAACGGACAGGCAGAAGGCGCTCGACGCCGCATT
GGCGCAGATCGACCGCGCCTTCGGCAAGGGCTCGGTGATGAAGCTGGGTTCGAAGGAAGCGATGCAGGTCGAGGCGGTCT
CGACCGGGTCGCTCGGGCTCGACATCGCGCTGGGCGTGGGCGGTCTGCCGCGCGGGCGCGTCATCGAAATCTATGGTCCC
GAAAGTTCGGGCAAGACAACGCTCGCGCTGCATTGCATCGCCGAAGCGCAGAAGATAGGCGGCACGGCGGCGTTCGTCGA
TGCCGAACATGCCCTCGATCCCGTCTATGCGCGCAAGCTGGGCGTCGATATCGACGAACTCATCGTGTCGCAGCCCGACA
CGGGCGAGCAGGCGCTCGAAATCGTCGACACGCTCGTCCGCTCGAACGCGATCGACGTGCTCGTCGTCGACTCGGTTGCC
GCGCTCGTCCCGCGCGCCGAGATTGAGGGCGAGATGGGCGACAGCCATGTCGGGCTGCAGGCGCGGTTGATGTCGCAGAG
CTTGCGCAAGCTCACCGGGTCGATCAGCCGTTCGCGCTGCATGGTGATCTTCATCAACCAGCTGCGCATGAAAATCGGCG
TGATGTATGGCAACCCCGAAACCACGACCGGCGGCAACGCGCTCAAATTCTATGCCTCGGTCCGCCTCGACATCCGCCGC
ACCGGACAGATCAAGAATGGCGATGAGATCGTCGGCAACACCACGCGCGTGAAGGTGGTGAAGAACAAGGTCGCGCCGCC
GTTCAAGCAGGTCGAGTTCGACATCATGTATGGGCAGGGCATCTCGAAGATCGGCGAAATCCTCGACATCGGCGTCAAGG
CCGGGCTGGTCGAGAAGTCGGGCGCCTGGTTCAGCTATGATTCGATCCGCATCGGGCAGGGCCGCGAAAATGCCAAGACC
TTCCTTAAGGAAAATCCAGAATTGATGGGCCGGCTCGAGGCCGCGATCCGTGGCCGCACCGACGCGGTCGCCGAAGAAAT
GATGGCGGGCCCCGACGACGACGTCGGTGGCGACGCCATCTGA

Upstream 100 bases:

>100_bases
GATAATTATGTTCCCCTCTTGTTCCACAAGAACAAATGTGGCACATGGGTCCGGCGTTGCGATGCGTCTGCGGTCGCTCT
AGAGCAGGAAAGGACGGCAA

Downstream 100 bases:

>100_bases
CGATCGTCCGGCCGGTTCGTGCGCTCGCGCGAGAACCGGTCGGCAAACGGCGGCGGGCCACGCGGCTTCCTTGTAACCGC
GGACATCTGCACGCCCCTCT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MAGQLSLVESGKAVNGTDRQKALDAALAQIDRAFGKGSVMKLGSKEAMQVEAVSTGSLGLDIALGVGGLPRGRVIEIYGP
ESSGKTTLALHCIAEAQKIGGTAAFVDAEHALDPVYARKLGVDIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVA
ALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISRSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRR
TGQIKNGDEIVGNTTRVKVVKNKVAPPFKQVEFDIMYGQGISKIGEILDIGVKAGLVEKSGAWFSYDSIRIGQGRENAKT
FLKENPELMGRLEAAIRGRTDAVAEEMMAGPDDDVGGDAI

Sequences:

>Translated_360_residues
MAGQLSLVESGKAVNGTDRQKALDAALAQIDRAFGKGSVMKLGSKEAMQVEAVSTGSLGLDIALGVGGLPRGRVIEIYGP
ESSGKTTLALHCIAEAQKIGGTAAFVDAEHALDPVYARKLGVDIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVA
ALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISRSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRR
TGQIKNGDEIVGNTTRVKVVKNKVAPPFKQVEFDIMYGQGISKIGEILDIGVKAGLVEKSGAWFSYDSIRIGQGRENAKT
FLKENPELMGRLEAAIRGRTDAVAEEMMAGPDDDVGGDAI
>Mature_359_residues
AGQLSLVESGKAVNGTDRQKALDAALAQIDRAFGKGSVMKLGSKEAMQVEAVSTGSLGLDIALGVGGLPRGRVIEIYGPE
SSGKTTLALHCIAEAQKIGGTAAFVDAEHALDPVYARKLGVDIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVAA
LVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISRSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRT
GQIKNGDEIVGNTTRVKVVKNKVAPPFKQVEFDIMYGQGISKIGEILDIGVKAGLVEKSGAWFSYDSIRIGQGRENAKTF
LKENPELMGRLEAAIRGRTDAVAEEMMAGPDDDVGGDAI

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=320, Percent_Identity=67.8125, Blast_Score=465, Evalue=1e-132,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38287; Mature: 38156

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGQLSLVESGKAVNGTDRQKALDAALAQIDRAFGKGSVMKLGSKEAMQVEAVSTGSLGL
CCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCE
DIALGVGGLPRGRVIEIYGPESSGKTTLALHCIAEAQKIGGTAAFVDAEHALDPVYARKL
EEEECCCCCCCCCEEEEECCCCCCCEEEEEEEHHHHHHCCCEEEEEEHHHHCCHHHHHHH
GVDIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQ
CCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHCCHHHCCCCCCCCCCCHH
ARLMSQSLRKLTGSISRSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRR
HHHHHHHHHHHHCCCCCCCEEEEEEEHHEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEE
TGQIKNGDEIVGNTTRVKVVKNKVAPPFKQVEFDIMYGQGISKIGEILDIGVKAGLVEKS
CCCCCCCCEECCCCEEEEEEECCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHCCCEECC
GAWFSYDSIRIGQGRENAKTFLKENPELMGRLEAAIRGRTDAVAEEMMAGPDDDVGGDAI
CCEEEECCEEECCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AGQLSLVESGKAVNGTDRQKALDAALAQIDRAFGKGSVMKLGSKEAMQVEAVSTGSLGL
CCCEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCE
DIALGVGGLPRGRVIEIYGPESSGKTTLALHCIAEAQKIGGTAAFVDAEHALDPVYARKL
EEEECCCCCCCCCEEEEECCCCCCCEEEEEEEHHHHHHCCCEEEEEEHHHHCCHHHHHHH
GVDIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQ
CCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHCCHHHCCCCCCCCCCCHH
ARLMSQSLRKLTGSISRSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRR
HHHHHHHHHHHHCCCCCCCEEEEEEEHHEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEE
TGQIKNGDEIVGNTTRVKVVKNKVAPPFKQVEFDIMYGQGISKIGEILDIGVKAGLVEKS
CCCCCCCCEECCCCEEEEEEECCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHCCCEECC
GAWFSYDSIRIGQGRENAKTFLKENPELMGRLEAAIRGRTDAVAEEMMAGPDDDVGGDAI
CCEEEECCEEECCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA