Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487211

Identifier: 103487211

GI number: 103487211

Start: 1815689

End: 1816036

Strand: Reverse

Name: 103487211

Synonym: Sala_1726

Alternate gene names: NA

Gene position: 1816036-1815689 (Counterclockwise)

Preceding gene: 103487212

Following gene: 103487210

Centisome position: 54.29

GC content: 67.53

Gene sequence:

>348_bases
ATGGCTGAGCGGCGCATCCTGATCGTCGAGGATGATGTGCTGATCGGCATGATGCTGGTCGACATGTTCGACGCGCTCGG
CCTGCCCGAACCCGCGCAGGCGACGAGCACGGACGAGGCGCTCGCGCTGATCGCCTCCGAGCCGCTGGCGGGGGCGCTCG
TGGACATCAACCTCGGCGAAGAAAAGGGCTGGCCCGTCGCCGACGCGCTCGCCGCGAGGGGCGTGCCCTTTGCCTTCACA
TCGGGCGGGGGAGACGTCATTCCCGCCGAACATGCGAGCTGTCGGCTGATCAGCAAACCTTTCCGGATCGGCGACATCGA
GACGGCGCTTCGGGCGTTCGGGGTCTAG

Upstream 100 bases:

>100_bases
ATCGACAATGTGTCTTTCCTGCCCAAACCCTTCTCGGTCGCGCAGCTGGCCGAGGCGACCTCGGCGGCGCTGGACGAGGC
CGCGCATCGCGGGGGCCGGG

Downstream 100 bases:

>100_bases
GATCCTGACCCTAAGGGTCAGATGTGCTCGTCATCCGGGCGAAGGTCGAAAAGATAATTATGTTCCCCTCTTGTTCCACA
AGAACAAATGTGGCACATGG

Product: response regulator receiver protein

Products: NA

Alternate protein names: Response Regulator Receiver; PAS/PAC Sensor Protein; Two-Component System Regulatory Protein; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator; 2-Component Receiver Domain Protein; Response Regulator Receiver/SARP Domain-Containing Protein; Response Regulator; Response Regulator Receiver Modulated GAF Sensor Protein; Response Regulator Recevier Domain Protein; Two-Component Sensor Histidine Kinase; Two-Component Receiver Domain-Containing Protein; CheY-Like Response Regulator; Two-Component System Response Regulator; Two-Component Response Regulator Protein; Two Component Response Regulator

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MAERRILIVEDDVLIGMMLVDMFDALGLPEPAQATSTDEALALIASEPLAGALVDINLGEEKGWPVADALAARGVPFAFT
SGGGDVIPAEHASCRLISKPFRIGDIETALRAFGV

Sequences:

>Translated_115_residues
MAERRILIVEDDVLIGMMLVDMFDALGLPEPAQATSTDEALALIASEPLAGALVDINLGEEKGWPVADALAARGVPFAFT
SGGGDVIPAEHASCRLISKPFRIGDIETALRAFGV
>Mature_114_residues
AERRILIVEDDVLIGMMLVDMFDALGLPEPAQATSTDEALALIASEPLAGALVDINLGEEKGWPVADALAARGVPFAFTS
GGGDVIPAEHASCRLISKPFRIGDIETALRAFGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12048; Mature: 11917

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERRILIVEDDVLIGMMLVDMFDALGLPEPAQATSTDEALALIASEPLAGALVDINLGE
CCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEECCCCCCEEEEEECCC
EKGWPVADALAARGVPFAFTSGGGDVIPAEHASCRLISKPFRIGDIETALRAFGV
CCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
AERRILIVEDDVLIGMMLVDMFDALGLPEPAQATSTDEALALIASEPLAGALVDINLGE
CCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEECCCCCCEEEEEECCC
EKGWPVADALAARGVPFAFTSGGGDVIPAEHASCRLISKPFRIGDIETALRAFGV
CCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA