| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487211
Identifier: 103487211
GI number: 103487211
Start: 1815689
End: 1816036
Strand: Reverse
Name: 103487211
Synonym: Sala_1726
Alternate gene names: NA
Gene position: 1816036-1815689 (Counterclockwise)
Preceding gene: 103487212
Following gene: 103487210
Centisome position: 54.29
GC content: 67.53
Gene sequence:
>348_bases ATGGCTGAGCGGCGCATCCTGATCGTCGAGGATGATGTGCTGATCGGCATGATGCTGGTCGACATGTTCGACGCGCTCGG CCTGCCCGAACCCGCGCAGGCGACGAGCACGGACGAGGCGCTCGCGCTGATCGCCTCCGAGCCGCTGGCGGGGGCGCTCG TGGACATCAACCTCGGCGAAGAAAAGGGCTGGCCCGTCGCCGACGCGCTCGCCGCGAGGGGCGTGCCCTTTGCCTTCACA TCGGGCGGGGGAGACGTCATTCCCGCCGAACATGCGAGCTGTCGGCTGATCAGCAAACCTTTCCGGATCGGCGACATCGA GACGGCGCTTCGGGCGTTCGGGGTCTAG
Upstream 100 bases:
>100_bases ATCGACAATGTGTCTTTCCTGCCCAAACCCTTCTCGGTCGCGCAGCTGGCCGAGGCGACCTCGGCGGCGCTGGACGAGGC CGCGCATCGCGGGGGCCGGG
Downstream 100 bases:
>100_bases GATCCTGACCCTAAGGGTCAGATGTGCTCGTCATCCGGGCGAAGGTCGAAAAGATAATTATGTTCCCCTCTTGTTCCACA AGAACAAATGTGGCACATGG
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator Receiver; PAS/PAC Sensor Protein; Two-Component System Regulatory Protein; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator; 2-Component Receiver Domain Protein; Response Regulator Receiver/SARP Domain-Containing Protein; Response Regulator; Response Regulator Receiver Modulated GAF Sensor Protein; Response Regulator Recevier Domain Protein; Two-Component Sensor Histidine Kinase; Two-Component Receiver Domain-Containing Protein; CheY-Like Response Regulator; Two-Component System Response Regulator; Two-Component Response Regulator Protein; Two Component Response Regulator
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MAERRILIVEDDVLIGMMLVDMFDALGLPEPAQATSTDEALALIASEPLAGALVDINLGEEKGWPVADALAARGVPFAFT SGGGDVIPAEHASCRLISKPFRIGDIETALRAFGV
Sequences:
>Translated_115_residues MAERRILIVEDDVLIGMMLVDMFDALGLPEPAQATSTDEALALIASEPLAGALVDINLGEEKGWPVADALAARGVPFAFT SGGGDVIPAEHASCRLISKPFRIGDIETALRAFGV >Mature_114_residues AERRILIVEDDVLIGMMLVDMFDALGLPEPAQATSTDEALALIASEPLAGALVDINLGEEKGWPVADALAARGVPFAFTS GGGDVIPAEHASCRLISKPFRIGDIETALRAFGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12048; Mature: 11917
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERRILIVEDDVLIGMMLVDMFDALGLPEPAQATSTDEALALIASEPLAGALVDINLGE CCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEECCCCCCEEEEEECCC EKGWPVADALAARGVPFAFTSGGGDVIPAEHASCRLISKPFRIGDIETALRAFGV CCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCC >Mature Secondary Structure AERRILIVEDDVLIGMMLVDMFDALGLPEPAQATSTDEALALIASEPLAGALVDINLGE CCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEECCCCCCEEEEEECCC EKGWPVADALAARGVPFAFTSGGGDVIPAEHASCRLISKPFRIGDIETALRAFGV CCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA