Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487167

Identifier: 103487167

GI number: 103487167

Start: 1769047

End: 1770798

Strand: Reverse

Name: 103487167

Synonym: Sala_1682

Alternate gene names: NA

Gene position: 1770798-1769047 (Counterclockwise)

Preceding gene: 103487168

Following gene: 103487166

Centisome position: 52.94

GC content: 74.94

Gene sequence:

>1752_bases
TTGCAGGCGCCGAAAGGCAGCGGGCGTGAGCGCCGCCGTGGTCGCCTGCCACGCCTGCGCCGACGCGCGCCGCGCCTCGC
TCGGCGCGGCCGCCGCGCCGCGTCGCGCGTTGCTCGCGCTGCCGGGATGTGCCTGCCAGACGCTGCCGCCCGGCGAGCGG
CGCAAGCGGCTGCTCGGTCCCGGCGCGGGGCCGCTTGCCGAGCTGTCGACGCGCTATTTCGCCGAGGTCCGGCAATGGGT
GGCGGTCGCCAAGGGGTGCGACGTGCGCGCACTGGGCGCCGCCGCCGATGTCGCGCTGGGCCTTGGCACCGGATCGCGGC
GCTGCGACGCGGTGGCACGCGCGACCGGCGAGATGCTCGAACGCTATGGCGCCGCGCTCGTGCCGCCGGGTGGCAGCGAG
CGCGTCGCGCTCACCGACTGGCGCGGCATCCCGTGCGGCGATGCGCCGGCGGCGGCGGCGTGGCTGCCCTTCCATCGCGA
CGGAAGGCCGGTGTTGCCTGCATCCTCGACGGGGCTTGGCTTTGCGTTCGAACGCGCGCGGGCGCTGCGCGCTGCGGCGT
ACGAGATGATCGAACGACGAGCGATCGACGCGCTGGCGCGCGGCGCGCAGGCGCAGGCGCTGGGCGCGATGCGCGTCGGC
AAGGTCGAAGCATCCGGGTTTCGTCTTGCGGCACCGGTGCCGGTCGCGCTGGTGCTGATCGCCGACGCACGTGGCCGGAT
CGTCGCGGCCGGCGCGGCGGCGCGGCCTCGAATCGCCGCGGCGCTGCGCGCGGCGCGGCGCGAGGCGGCGCTTGGCTGGC
TGATCGCACAGGGGCGCGTGCTGCCGGGTGCCGGGCTGCACGGCGCGGATCTGTTGGGGCCGCTCGCCGAACTTTCACTT
GCCGAATGGCCTGTCGCGGCGCGCGGGGGCGCCGCACCGCCGCCGCGCGGGGTGCTGGCGCGCGGCTTTGCTTTCGCCAA
CCTGACGCCGGGCGACATCGCCGCGGCGGGCGGATGGGTGGTGCGCGCGATGGAGAGGATCGCCCCCGATGCTTGAGACC
GCGCCATCGCCCGTCGCGGATCGGGCCCGCCTGCTTTGCGGTGGCGATGCGCATGCCGTCGCCCCGCTGCTCGATGCACT
GGCGTCGTCGTCGGCGCTTGCCGCGGGCGTGCGTTTGCTGCGCGGTCGCGGCGCGGGGTGGGCAGGGACGCCGCGCGCTC
TCGCGATGCGGCTGGCGGCCACCCTGCGGCCGTGGCCCGGCCGCGACGAGATACGCGCGTTCGACAGCCGCGCGGGCACG
GTCACCGCGCGCGATCTGGGGAAAGCGATCGTCGATCCGAACCGTGTCGCCGATACGATCGACAGCGACGGCACGGTGGT
GTTCCAGAAAATCGACGGCCTCGATTTTCACTGGCACCGGCTGGCGCGCGCGTTTGAGGGCGCGACGCGCCGACCCGCGC
AGGTCAACGCCTATGCGGGCGCGCCGGACGCGCCGGGACTCGCGTGGCACCGCGACCCGCACGACGTGCTGGTCCTGCAA
CTCGCGGGCACCAAAATCTTTGCGGTCGAGCGGGACGCGGGCGCCATCGACATTCCGCTGGCGCCCGGCGATCTATTGTG
GCTGGACCGGGGTGTCCGGCATCGCGCGACGAACGGCTCGGCCGGGTCGATCCATGCCTCGCTTGGCCTGCTCCACTGGA
TGCGCGATGCGATGGCGGTGCCGGTCATCGACCGGCGGCCGCTGGCTCCGCCGCTTCCCGCCTGTCCGCTGA

Upstream 100 bases:

>100_bases
TGCAAAGGCTGGTGCCCGCACGAAAGCCACATTGCGGCGCGGCGCGGCGCGGCGGGGCGCTGTTGCGGGCTGGCGCCGGT
CTTCGATCATTTCGAGACGC

Downstream 100 bases:

>100_bases
GCGCCGAAGAACGCGGCGCGGCGCTGCTCGACTGGCGCCCGTTTCGTGACCTGCCCCCCGATGTGGCGGGCGGCGAGCAT
CTGCGGCCCGACCTGCTCGC

Product: kinesin K39, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 583

Protein sequence:

>583_residues
MQAPKGSGRERRRGRLPRLRRRAPRLARRGRRAASRVARAAGMCLPDAAARRAAQAAARSRRGAACRAVDALFRRGPAMG
GGRQGVRRARTGRRRRCRAGPWHRIAALRRGGTRDRRDARTLWRRARAAGWQRARRAHRLARHPVRRCAGGGGVAALPSR
RKAGVACILDGAWLCVRTRAGAARCGVRDDRTTSDRRAGARRAGAGAGRDARRQGRSIRVSSCGTGAGRAGADRRRTWPD
RRGRRGGAASNRRGAARGAARGGAWLADRTGARAAGCRAARRGSVGAARRTFTCRMACRGARGRRTAAARGAGARLCFRQ
PDAGRHRRGGRMGGARDGEDRPRCLRPRHRPSRIGPACFAVAMRMPSPRCSMHWRRRRRLPRACVCCAVAARGGQGRRAL
SRCGWRPPCGRGPAATRYARSTAARARSPRAIWGKRSSIRTVSPIRSTATARWCSRKSTASIFTGTGWRARLRARRADPR
RSTPMRARRTRRDSRGTATRTTCWSCNSRAPKSLRSSGTRAPSTFRWRPAIYCGWTGVSGIARRTARPGRSMPRLACSTG
CAMRWRCRSSTGGRWLRRFPPVR

Sequences:

>Translated_583_residues
MQAPKGSGRERRRGRLPRLRRRAPRLARRGRRAASRVARAAGMCLPDAAARRAAQAAARSRRGAACRAVDALFRRGPAMG
GGRQGVRRARTGRRRRCRAGPWHRIAALRRGGTRDRRDARTLWRRARAAGWQRARRAHRLARHPVRRCAGGGGVAALPSR
RKAGVACILDGAWLCVRTRAGAARCGVRDDRTTSDRRAGARRAGAGAGRDARRQGRSIRVSSCGTGAGRAGADRRRTWPD
RRGRRGGAASNRRGAARGAARGGAWLADRTGARAAGCRAARRGSVGAARRTFTCRMACRGARGRRTAAARGAGARLCFRQ
PDAGRHRRGGRMGGARDGEDRPRCLRPRHRPSRIGPACFAVAMRMPSPRCSMHWRRRRRLPRACVCCAVAARGGQGRRAL
SRCGWRPPCGRGPAATRYARSTAARARSPRAIWGKRSSIRTVSPIRSTATARWCSRKSTASIFTGTGWRARLRARRADPR
RSTPMRARRTRRDSRGTATRTTCWSCNSRAPKSLRSSGTRAPSTFRWRPAIYCGWTGVSGIARRTARPGRSMPRLACSTG
CAMRWRCRSSTGGRWLRRFPPVR
>Mature_583_residues
MQAPKGSGRERRRGRLPRLRRRAPRLARRGRRAASRVARAAGMCLPDAAARRAAQAAARSRRGAACRAVDALFRRGPAMG
GGRQGVRRARTGRRRRCRAGPWHRIAALRRGGTRDRRDARTLWRRARAAGWQRARRAHRLARHPVRRCAGGGGVAALPSR
RKAGVACILDGAWLCVRTRAGAARCGVRDDRTTSDRRAGARRAGAGAGRDARRQGRSIRVSSCGTGAGRAGADRRRTWPD
RRGRRGGAASNRRGAARGAARGGAWLADRTGARAAGCRAARRGSVGAARRTFTCRMACRGARGRRTAAARGAGARLCFRQ
PDAGRHRRGGRMGGARDGEDRPRCLRPRHRPSRIGPACFAVAMRMPSPRCSMHWRRRRRLPRACVCCAVAARGGQGRRAL
SRCGWRPPCGRGPAATRYARSTAARARSPRAIWGKRSSIRTVSPIRSTATARWCSRKSTASIFTGTGWRARLRARRADPR
RSTPMRARRTRRDSRGTATRTTCWSCNSRAPKSLRSSGTRAPSTFRWRPAIYCGWTGVSGIARRTARPGRSMPRLACSTG
CAMRWRCRSSTGGRWLRRFPPVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64139; Mature: 64139

Theoretical pI: Translated: 12.85; Mature: 12.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAPKGSGRERRRGRLPRLRRRAPRLARRGRRAASRVARAAGMCLPDAAARRAAQAAARS
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RRGAACRAVDALFRRGPAMGGGRQGVRRARTGRRRRCRAGPWHRIAALRRGGTRDRRDAR
HCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHH
TLWRRARAAGWQRARRAHRLARHPVRRCAGGGGVAALPSRRKAGVACILDGAWLCVRTRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCCEEEEEECC
GAARCGVRDDRTTSDRRAGARRAGAGAGRDARRQGRSIRVSSCGTGAGRAGADRRRTWPD
CHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCHHCCCCH
RRGRRGGAASNRRGAARGAARGGAWLADRTGARAAGCRAARRGSVGAARRTFTCRMACRG
HCCCCCCCCCCCCCHHHCCCCCCCEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCC
ARGRRTAAARGAGARLCFRQPDAGRHRRGGRMGGARDGEDRPRCLRPRHRPSRIGPACFA
CCCCCHHHHCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHH
VAMRMPSPRCSMHWRRRRRLPRACVCCAVAARGGQGRRALSRCGWRPPCGRGPAATRYAR
HHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHH
STAARARSPRAIWGKRSSIRTVSPIRSTATARWCSRKSTASIFTGTGWRARLRARRADPR
HHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCC
RSTPMRARRTRRDSRGTATRTTCWSCNSRAPKSLRSSGTRAPSTFRWRPAIYCGWTGVSG
CCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCEEECCEEEECCCCHHH
IARRTARPGRSMPRLACSTGCAMRWRCRSSTGGRWLRRFPPVR
HHHHHCCCCCCCCHHHHHCCCCEEEEECCCCCCHHHHHCCCCC
>Mature Secondary Structure
MQAPKGSGRERRRGRLPRLRRRAPRLARRGRRAASRVARAAGMCLPDAAARRAAQAAARS
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RRGAACRAVDALFRRGPAMGGGRQGVRRARTGRRRRCRAGPWHRIAALRRGGTRDRRDAR
HCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHH
TLWRRARAAGWQRARRAHRLARHPVRRCAGGGGVAALPSRRKAGVACILDGAWLCVRTRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEECCCEEEEEECC
GAARCGVRDDRTTSDRRAGARRAGAGAGRDARRQGRSIRVSSCGTGAGRAGADRRRTWPD
CHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCHHCCCCH
RRGRRGGAASNRRGAARGAARGGAWLADRTGARAAGCRAARRGSVGAARRTFTCRMACRG
HCCCCCCCCCCCCCHHHCCCCCCCEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCC
ARGRRTAAARGAGARLCFRQPDAGRHRRGGRMGGARDGEDRPRCLRPRHRPSRIGPACFA
CCCCCHHHHCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHH
VAMRMPSPRCSMHWRRRRRLPRACVCCAVAARGGQGRRALSRCGWRPPCGRGPAATRYAR
HHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHH
STAARARSPRAIWGKRSSIRTVSPIRSTATARWCSRKSTASIFTGTGWRARLRARRADPR
HHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCC
RSTPMRARRTRRDSRGTATRTTCWSCNSRAPKSLRSSGTRAPSTFRWRPAIYCGWTGVSG
CCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCEEECCEEEECCCCHHH
IARRTARPGRSMPRLACSTGCAMRWRCRSSTGGRWLRRFPPVR
HHHHHCCCCCCCCHHHHHCCCCEEEEECCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA