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The map label for this gene is fixN [H]

Identifier: 103487161

GI number: 103487161

Start: 1763487

End: 1765145

Strand: Reverse

Name: fixN [H]

Synonym: Sala_1676

Alternate gene names: 103487161

Gene position: 1765145-1763487 (Counterclockwise)

Preceding gene: 103487163

Following gene: 103487160

Centisome position: 52.77

GC content: 63.11

Gene sequence:

>1659_bases
ATGGACGGTGTGGTGATGAAGGCGGGCGGCTGGCTGGCGCTGGCGCTGTTCGCACTGGTCATGGCGGCGCTGGCGGTCGA
TGCGCCGTTCGCCGTGCATATGATGATCGTCGCGGCCGCCTGTCTGGCGGGGCTCTGGGTTACGATTTCACGGGCGGACT
ATGGCGCCATCGCGCGCGGCCTGTTGAAGATGCCCGTCGATCAAGGCGTCTATGACGACGATCCGGTGCGCTGGGGTGTC
ATCGCGACGCTGTTCTGGGGCATGGCGGGAATGGCCGCGGGGCTGTTCATCGCGCTCCAGCTCGCCTTTCCCGCGCTTAA
CCTCAATCTCGAATATACGACCTTCGGGCGGCTGCGCCCGCTCCACACCTCGGCGGTGATCTTTGCGTTCGGCGGCAATG
CGCTGATCGCGACGAGCTTTTACGTCGTTCAGCGCACCTGCCGCGCGCGGCTCGCCTTTCCGAACCTCGCGCGCTTTGTC
TTCTGGGGCTATCAGCTCTTCATCGTCCTCGCCGCCACCGGCTATCTGATGGGGGTCACCGCGGCGAAGGAATATGCCGA
ACCCGAATGGTATGTCGACCTTTGGCTCACCGTCGTCTGGGTCGCTTACCTGGCCGTTTTCGTGGGCACGATCGTCAAGC
GCCGCGAACCGCACATCTATGTCGCGAACTGGTTCTACCTCAGCTTCATCGTCACCATCGCGATGCTGCACATCGTCAAC
AATCTGTCGATGCCCGCCAGCCTCTTCGGCTCGAAGAGCTATGCCGCCTTCGCCGGAGTACAGGATGCGCTGACCCAGTG
GTGGTACGGGCATAATGCGGTCGGTTTCTTCCTGACCGCGGGCTTCCTCGCGATGATGTATTATTTCGTGCCGAAGCAGG
CCGAACGACCGGTCTATTCCTACCGCCTGTCGATCATCCACTTCTGGTCGCTCATCTTCCTCTATATCTGGGCGGGGCCG
CACCACCTGCATTACACCGCGCTGCCCGACTGGGCGCAGACGCTCGGCATGGTCTTTTCGGTGATCCTGTGGATGCCGAG
CTGGGGCGGGATGATCAACGGGCTGATGACGCTCAACGGCGCGTGGGACAAGATCCGCACCGACCCGATCATCCGCATGA
TGGTGATGGCGCTCGCCTTCTACGGCATGAGCACCTTCGAAGGCCCGATGATGTCGATCAAATGGGTCAATTCGATGTCG
CACTACACCGACTGGACGATCGGCCATGTCCATTCGGGCGCGCTCGGCTGGAACGGCATGATCACCTTTGCCTGCGTCTA
TTATCTGGTGCCGCGCCTGTGGGGTCGTCCGCGGCTTTACAGCCTGCGCATGGTCAACTGGCACTTCTGGCTCGCGACCG
TCGGCATCGTTTTCTACGCCGCGTCGATGTGGGTCGCGGGGATCATGCAGGGGCTGATGTGGCGCGAATATGGCGCCGAC
GGCTACCTCGTCTACAGCTTCGCCGAAAGCGTCGCGGCGATGCACCCGATGTATCTGATCCGCGCGGCGGGCGGGGCGAT
GTATCTCGCCGGCTTCGTCATCATGATCGTCAACGTCTGGGCGACGCTTGCCGGCCGGGTGCGCGCCGAAAAGCCGATGA
CCGAAACGCCCTACAGCGCCGCGGCGGACCGCCCGCTCGCGCCCGTGCCCGCCGAATAA

Upstream 100 bases:

>100_bases
CGCAAGCAATTCGTTGATCCCGGTCAATGTTTCGCCGCCCGCGCGCGTCCAAGAGCGACCCGAAGCGCGGCGCGAAGCCG
CTGGAAGCGGGGACGAACAT

Downstream 100 bases:

>100_bases
GGAGCCCGGACCATGGCCACCCAACCCGCCGAAAAGCGCCTCAGCCACAAGAAGATCGAGCGCAACGTGACGCTGCTCGG
CGCGCTCGCCCTGTTCACCG

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MDGVVMKAGGWLALALFALVMAALAVDAPFAVHMMIVAAACLAGLWVTISRADYGAIARGLLKMPVDQGVYDDDPVRWGV
IATLFWGMAGMAAGLFIALQLAFPALNLNLEYTTFGRLRPLHTSAVIFAFGGNALIATSFYVVQRTCRARLAFPNLARFV
FWGYQLFIVLAATGYLMGVTAAKEYAEPEWYVDLWLTVVWVAYLAVFVGTIVKRREPHIYVANWFYLSFIVTIAMLHIVN
NLSMPASLFGSKSYAAFAGVQDALTQWWYGHNAVGFFLTAGFLAMMYYFVPKQAERPVYSYRLSIIHFWSLIFLYIWAGP
HHLHYTALPDWAQTLGMVFSVILWMPSWGGMINGLMTLNGAWDKIRTDPIIRMMVMALAFYGMSTFEGPMMSIKWVNSMS
HYTDWTIGHVHSGALGWNGMITFACVYYLVPRLWGRPRLYSLRMVNWHFWLATVGIVFYAASMWVAGIMQGLMWREYGAD
GYLVYSFAESVAAMHPMYLIRAAGGAMYLAGFVIMIVNVWATLAGRVRAEKPMTETPYSAAADRPLAPVPAE

Sequences:

>Translated_552_residues
MDGVVMKAGGWLALALFALVMAALAVDAPFAVHMMIVAAACLAGLWVTISRADYGAIARGLLKMPVDQGVYDDDPVRWGV
IATLFWGMAGMAAGLFIALQLAFPALNLNLEYTTFGRLRPLHTSAVIFAFGGNALIATSFYVVQRTCRARLAFPNLARFV
FWGYQLFIVLAATGYLMGVTAAKEYAEPEWYVDLWLTVVWVAYLAVFVGTIVKRREPHIYVANWFYLSFIVTIAMLHIVN
NLSMPASLFGSKSYAAFAGVQDALTQWWYGHNAVGFFLTAGFLAMMYYFVPKQAERPVYSYRLSIIHFWSLIFLYIWAGP
HHLHYTALPDWAQTLGMVFSVILWMPSWGGMINGLMTLNGAWDKIRTDPIIRMMVMALAFYGMSTFEGPMMSIKWVNSMS
HYTDWTIGHVHSGALGWNGMITFACVYYLVPRLWGRPRLYSLRMVNWHFWLATVGIVFYAASMWVAGIMQGLMWREYGAD
GYLVYSFAESVAAMHPMYLIRAAGGAMYLAGFVIMIVNVWATLAGRVRAEKPMTETPYSAAADRPLAPVPAE
>Mature_552_residues
MDGVVMKAGGWLALALFALVMAALAVDAPFAVHMMIVAAACLAGLWVTISRADYGAIARGLLKMPVDQGVYDDDPVRWGV
IATLFWGMAGMAAGLFIALQLAFPALNLNLEYTTFGRLRPLHTSAVIFAFGGNALIATSFYVVQRTCRARLAFPNLARFV
FWGYQLFIVLAATGYLMGVTAAKEYAEPEWYVDLWLTVVWVAYLAVFVGTIVKRREPHIYVANWFYLSFIVTIAMLHIVN
NLSMPASLFGSKSYAAFAGVQDALTQWWYGHNAVGFFLTAGFLAMMYYFVPKQAERPVYSYRLSIIHFWSLIFLYIWAGP
HHLHYTALPDWAQTLGMVFSVILWMPSWGGMINGLMTLNGAWDKIRTDPIIRMMVMALAFYGMSTFEGPMMSIKWVNSMS
HYTDWTIGHVHSGALGWNGMITFACVYYLVPRLWGRPRLYSLRMVNWHFWLATVGIVFYAASMWVAGIMQGLMWREYGAD
GYLVYSFAESVAAMHPMYLIRAAGGAMYLAGFVIMIVNVWATLAGRVRAEKPMTETPYSAAADRPLAPVPAE

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 61768; Mature: 61768

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGVVMKAGGWLALALFALVMAALAVDAPFAVHMMIVAAACLAGLWVTISRADYGAIARG
CCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHH
LLKMPVDQGVYDDDPVRWGVIATLFWGMAGMAAGLFIALQLAFPALNLNLEYTTFGRLRP
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCC
LHTSAVIFAFGGNALIATSFYVVQRTCRARLAFPNLARFVFWGYQLFIVLAATGYLMGVT
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAKEYAEPEWYVDLWLTVVWVAYLAVFVGTIVKRREPHIYVANWFYLSFIVTIAMLHIVN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH
NLSMPASLFGSKSYAAFAGVQDALTQWWYGHNAVGFFLTAGFLAMMYYFVPKQAERPVYS
CCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
YRLSIIHFWSLIFLYIWAGPHHLHYTALPDWAQTLGMVFSVILWMPSWGGMINGLMTLNG
HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHEEECC
AWDKIRTDPIIRMMVMALAFYGMSTFEGPMMSIKWVNSMSHYTDWTIGHVHSGALGWNGM
CHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCEEECEECCCCCCCHH
ITFACVYYLVPRLWGRPRLYSLRMVNWHFWLATVGIVFYAASMWVAGIMQGLMWREYGAD
HHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GYLVYSFAESVAAMHPMYLIRAAGGAMYLAGFVIMIVNVWATLAGRVRAEKPMTETPYSA
CEEEHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
AADRPLAPVPAE
CCCCCCCCCCCC
>Mature Secondary Structure
MDGVVMKAGGWLALALFALVMAALAVDAPFAVHMMIVAAACLAGLWVTISRADYGAIARG
CCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHH
LLKMPVDQGVYDDDPVRWGVIATLFWGMAGMAAGLFIALQLAFPALNLNLEYTTFGRLRP
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCC
LHTSAVIFAFGGNALIATSFYVVQRTCRARLAFPNLARFVFWGYQLFIVLAATGYLMGVT
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAKEYAEPEWYVDLWLTVVWVAYLAVFVGTIVKRREPHIYVANWFYLSFIVTIAMLHIVN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH
NLSMPASLFGSKSYAAFAGVQDALTQWWYGHNAVGFFLTAGFLAMMYYFVPKQAERPVYS
CCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
YRLSIIHFWSLIFLYIWAGPHHLHYTALPDWAQTLGMVFSVILWMPSWGGMINGLMTLNG
HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHEEECC
AWDKIRTDPIIRMMVMALAFYGMSTFEGPMMSIKWVNSMSHYTDWTIGHVHSGALGWNGM
CHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCEEECEECCCCCCCHH
ITFACVYYLVPRLWGRPRLYSLRMVNWHFWLATVGIVFYAASMWVAGIMQGLMWREYGAD
HHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GYLVYSFAESVAAMHPMYLIRAAGGAMYLAGFVIMIVNVWATLAGRVRAEKPMTETPYSA
CEEEHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCC
AADRPLAPVPAE
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]