Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is fixG [H]

Identifier: 103487157

GI number: 103487157

Start: 1760195

End: 1761652

Strand: Reverse

Name: fixG [H]

Synonym: Sala_1672

Alternate gene names: 103487157

Gene position: 1761652-1760195 (Counterclockwise)

Preceding gene: 103487158

Following gene: 103487156

Centisome position: 52.66

GC content: 66.46

Gene sequence:

>1458_bases
ATGGCCAGCGCTGAAGATCTGTCCGGCGCTCGCGCACCACTTTATGCGGCGCGGCGGGGCGTTTACCCGAAAGCGGTGAG
CGGTCCCTTCCGCCGCTTCAAATGGGCGATCATGGGGGTCACGCTGGCGATCTATTACGGCACGCCGTGGATGCGCTGGG
ACCGCGGGCCCTATGCCCCCGACCAGGCGGTGCTCGTCGACCTCGCCAACCGGCGCTTCTATATGTTCCAGATCGAAATC
TGGCCGCACGAGTTTTATTATGTCGCGGGCCTGCTGATCATGGCGGGGATCGGATTGTTCCTCGTCACCAGCGCGGTCGG
GCGCGCCTGGTGCGGCTATGCCTGCCCGCAGACGGTGTGGACCGACCTGTTCCAGCATGTCGACCGGCTGGTCGACGGCG
ACCGCAATGCGCAAGTCCGCCTGGCCAATGGTCCATGGAGCTTTGAAAAGATTTCAAAGCGGACGATCAAATATCTGATC
TATCTGACCATCGCTTTCTGGACCGGCGGCGCGTGGATCATGTATTTCGCCGACGCGCCGACGCTGACCCATGATTTCTG
GACGGGGCAGGCGGCGCCGATCGCCTATGGAACGGTCGCGGTTCTGACCGCGACCACCTTCATCCTCGGGGGCTTCCTGC
GCGAGCAGGTGTGCATCTATATGTGCCCCTGGCCGCGCATCCAGACCGCGATGATGGACGAAAAATCGCTGCTGGTGACG
TACAAGGACTGGCGCGGCGAACCGCGGGGCAGCGTCAAGAAGGCGATGGCGCATCCCGGTGCGTTCGGCGACTGCATCGA
CTGCAACCAGTGCGTCGCGGTGTGCCCGACCGGCATAGACATCCGCGAAGGGCCGCAGATCGGCTGCATCACCTGTGCGC
TGTGCATCGACGCGTGCGACGGCGTGATGGCGCAGGTCGGGCGGCCGCGCGGGCTGATCGACTATTGCACGCTCGACGAT
GCCGCGGCCGAAAAGGCGGGCGGGCAGGCGCGGCCGGCGTTGCGGACACTGCTCCGCCCCCGCACGCTGATCTACCTCGG
CGTATGGAGCGCGATCGGTGCGGCGATGCTCTTTTCGCTGGGGCAGCGCACGCGGCTCGACCTCGCCGTCCAGCATGAGC
GCAGCCCGCTCCATGTCCAGCTTTCGGATGGGCATGTCCGCAACAACTACACGCTGAAGCTGCGCAACATGGAAACGCGA
CCACGCCGGGTCGCGGTGTCGGTGAGCGGGCTGGCCGACGCGGTGCTGTGGACCGAAGGCGGCACGCGCGAGGGCGCCGG
CCGCACCGTTTCGCTGACCCTCGCCCCCGACAGCGTGACGCGGGTGCGGTTGTTCATCGCGGCGCCCGGCACCGGCCCGG
CCCGGCAGGATTTCACGATCAGCACGCGCGGCCTCGACGGCGATCCGCGCGGCGACAGCGACATCATCCAGTTCGACCGT
CCGGGGAGTGGACAATGA

Upstream 100 bases:

>100_bases
CGGATCGACCCGGTGACGATCAAGATGCTGTCCGCCTATGTCTATTCGCTCGGTGGCGGCGAAAAGGGGCTTGTTCCTGC
CACCGGCGGGCAGGGAACCG

Downstream 100 bases:

>100_bases
CTGAAAAACGGGCCCGCAAGCCGTTCACCGGCTGGCATATGACGGCCATTCTTGTGGCTTTCTTTGCCACCGTCGTCGCG
GTCAATTTCACGATGGCGCG

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MASAEDLSGARAPLYAARRGVYPKAVSGPFRRFKWAIMGVTLAIYYGTPWMRWDRGPYAPDQAVLVDLANRRFYMFQIEI
WPHEFYYVAGLLIMAGIGLFLVTSAVGRAWCGYACPQTVWTDLFQHVDRLVDGDRNAQVRLANGPWSFEKISKRTIKYLI
YLTIAFWTGGAWIMYFADAPTLTHDFWTGQAAPIAYGTVAVLTATTFILGGFLREQVCIYMCPWPRIQTAMMDEKSLLVT
YKDWRGEPRGSVKKAMAHPGAFGDCIDCNQCVAVCPTGIDIREGPQIGCITCALCIDACDGVMAQVGRPRGLIDYCTLDD
AAAEKAGGQARPALRTLLRPRTLIYLGVWSAIGAAMLFSLGQRTRLDLAVQHERSPLHVQLSDGHVRNNYTLKLRNMETR
PRRVAVSVSGLADAVLWTEGGTREGAGRTVSLTLAPDSVTRVRLFIAAPGTGPARQDFTISTRGLDGDPRGDSDIIQFDR
PGSGQ

Sequences:

>Translated_485_residues
MASAEDLSGARAPLYAARRGVYPKAVSGPFRRFKWAIMGVTLAIYYGTPWMRWDRGPYAPDQAVLVDLANRRFYMFQIEI
WPHEFYYVAGLLIMAGIGLFLVTSAVGRAWCGYACPQTVWTDLFQHVDRLVDGDRNAQVRLANGPWSFEKISKRTIKYLI
YLTIAFWTGGAWIMYFADAPTLTHDFWTGQAAPIAYGTVAVLTATTFILGGFLREQVCIYMCPWPRIQTAMMDEKSLLVT
YKDWRGEPRGSVKKAMAHPGAFGDCIDCNQCVAVCPTGIDIREGPQIGCITCALCIDACDGVMAQVGRPRGLIDYCTLDD
AAAEKAGGQARPALRTLLRPRTLIYLGVWSAIGAAMLFSLGQRTRLDLAVQHERSPLHVQLSDGHVRNNYTLKLRNMETR
PRRVAVSVSGLADAVLWTEGGTREGAGRTVSLTLAPDSVTRVRLFIAAPGTGPARQDFTISTRGLDGDPRGDSDIIQFDR
PGSGQ
>Mature_484_residues
ASAEDLSGARAPLYAARRGVYPKAVSGPFRRFKWAIMGVTLAIYYGTPWMRWDRGPYAPDQAVLVDLANRRFYMFQIEIW
PHEFYYVAGLLIMAGIGLFLVTSAVGRAWCGYACPQTVWTDLFQHVDRLVDGDRNAQVRLANGPWSFEKISKRTIKYLIY
LTIAFWTGGAWIMYFADAPTLTHDFWTGQAAPIAYGTVAVLTATTFILGGFLREQVCIYMCPWPRIQTAMMDEKSLLVTY
KDWRGEPRGSVKKAMAHPGAFGDCIDCNQCVAVCPTGIDIREGPQIGCITCALCIDACDGVMAQVGRPRGLIDYCTLDDA
AAEKAGGQARPALRTLLRPRTLIYLGVWSAIGAAMLFSLGQRTRLDLAVQHERSPLHVQLSDGHVRNNYTLKLRNMETRP
RRVAVSVSGLADAVLWTEGGTREGAGRTVSLTLAPDSVTRVRLFIAAPGTGPARQDFTISTRGLDGDPRGDSDIIQFDRP
GSGQ

Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR012285
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53494; Mature: 53363

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAEDLSGARAPLYAARRGVYPKAVSGPFRRFKWAIMGVTLAIYYGTPWMRWDRGPYAP
CCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCEEECCCCCCC
DQAVLVDLANRRFYMFQIEIWPHEFYYVAGLLIMAGIGLFLVTSAVGRAWCGYACPQTVW
CCEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TDLFQHVDRLVDGDRNAQVRLANGPWSFEKISKRTIKYLIYLTIAFWTGGAWIMYFADAP
HHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHEEEEEEECCCEEEEEEECCC
TLTHDFWTGQAAPIAYGTVAVLTATTFILGGFLREQVCIYMCPWPRIQTAMMDEKSLLVT
CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHCCCCEEEEE
YKDWRGEPRGSVKKAMAHPGAFGDCIDCNQCVAVCPTGIDIREGPQIGCITCALCIDACD
ECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHH
GVMAQVGRPRGLIDYCTLDDAAAEKAGGQARPALRTLLRPRTLIYLGVWSAIGAAMLFSL
HHHHHCCCCCCCEEEECCCHHHHHHCCCCCCHHHHHHHCCCEEEEEEHHHHHHHHHHHHC
GQRTRLDLAVQHERSPLHVQLSDGHVRNNYTLKLRNMETRPRRVAVSVSGLADAVLWTEG
CCCCEEEEEEECCCCCEEEEECCCEEECCEEEEEECCCCCCCEEEEEECCCCEEEEECCC
GTREGAGRTVSLTLAPDSVTRVRLFIAAPGTGPARQDFTISTRGLDGDPRGDSDIIQFDR
CCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEECC
PGSGQ
CCCCC
>Mature Secondary Structure 
ASAEDLSGARAPLYAARRGVYPKAVSGPFRRFKWAIMGVTLAIYYGTPWMRWDRGPYAP
CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCEEECCCCCCC
DQAVLVDLANRRFYMFQIEIWPHEFYYVAGLLIMAGIGLFLVTSAVGRAWCGYACPQTVW
CCEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TDLFQHVDRLVDGDRNAQVRLANGPWSFEKISKRTIKYLIYLTIAFWTGGAWIMYFADAP
HHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHEEEEEEECCCEEEEEEECCC
TLTHDFWTGQAAPIAYGTVAVLTATTFILGGFLREQVCIYMCPWPRIQTAMMDEKSLLVT
CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHCCCCEEEEE
YKDWRGEPRGSVKKAMAHPGAFGDCIDCNQCVAVCPTGIDIREGPQIGCITCALCIDACD
ECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHH
GVMAQVGRPRGLIDYCTLDDAAAEKAGGQARPALRTLLRPRTLIYLGVWSAIGAAMLFSL
HHHHHCCCCCCCEEEECCCHHHHHHCCCCCCHHHHHHHCCCEEEEEEHHHHHHHHHHHHC
GQRTRLDLAVQHERSPLHVQLSDGHVRNNYTLKLRNMETRPRRVAVSVSGLADAVLWTEG
CCCCEEEEEEECCCCCEEEEECCCEEECCEEEEEECCCCCCCEEEEEECCCCEEEEECCC
GTREGAGRTVSLTLAPDSVTRVRLFIAAPGTGPARQDFTISTRGLDGDPRGDSDIIQFDR
CCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEECC
PGSGQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2536685; 11481432 [H]