Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is fixH [H]

Identifier: 103487156

GI number: 103487156

Start: 1759728

End: 1760198

Strand: Reverse

Name: fixH [H]

Synonym: Sala_1671

Alternate gene names: 103487156

Gene position: 1760198-1759728 (Counterclockwise)

Preceding gene: 103487157

Following gene: 103487155

Centisome position: 52.62

GC content: 65.61

Gene sequence:

>471_bases
ATGACTGAAAAACGGGCCCGCAAGCCGTTCACCGGCTGGCATATGACGGCCATTCTTGTGGCTTTCTTTGCCACCGTCGT
CGCGGTCAATTTCACGATGGCGCGCCTCGCCATGTCGACCTTTGGCGGCAAGGTGGTCGAGAACAGCTATGTCGCGAGCC
AGCAGTACAACAAGTTGCTTGCACGCGCAGAGGCGCAGGACCAGCTGGGCTGGACACCGACGGTCACGCGCGACCCCGAC
CGGCGCGTTCGCATCGACATTCGCAAGGATGGCGAGCCGCTCGCAGACCTCAGCGTCGGCGCGACGGCCAGCCATCCGCT
CGGGCGCACCCCACCTCTCGCGCTTCGTTTCGTCGCCGCGGAGGATGGCGGGTGGCGTTCGGTCGAGCCGCTGGCGGAGG
GGCGCCAGCGGCTCGACATCAGGATTTCCAGGGGCACGGACGAGGCGCGCTACCGGATCGACCTAAAATGA

Upstream 100 bases:

>100_bases
GCCCGGCCCGGCAGGATTTCACGATCAGCACGCGCGGCCTCGACGGCGATCCGCGCGGCGACAGCGACATCATCCAGTTC
GACCGTCCGGGGAGTGGACA

Downstream 100 bases:

>100_bases
CCTCCGCCGCGCTCATCGAACGCGACTTCGCGGTGCCCGACATCCGCTGCGCGGGGTGCATCGCCAAGCTGGAGCAGGGG
CTGGTGCGCGACAGGCGCAT

Product: integral membrane protein linked to a cation pump-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTEKRARKPFTGWHMTAILVAFFATVVAVNFTMARLAMSTFGGKVVENSYVASQQYNKLLARAEAQDQLGWTPTVTRDPD
RRVRIDIRKDGEPLADLSVGATASHPLGRTPPLALRFVAAEDGGWRSVEPLAEGRQRLDIRISRGTDEARYRIDLK

Sequences:

>Translated_156_residues
MTEKRARKPFTGWHMTAILVAFFATVVAVNFTMARLAMSTFGGKVVENSYVASQQYNKLLARAEAQDQLGWTPTVTRDPD
RRVRIDIRKDGEPLADLSVGATASHPLGRTPPLALRFVAAEDGGWRSVEPLAEGRQRLDIRISRGTDEARYRIDLK
>Mature_155_residues
TEKRARKPFTGWHMTAILVAFFATVVAVNFTMARLAMSTFGGKVVENSYVASQQYNKLLARAEAQDQLGWTPTVTRDPDR
RVRIDIRKDGEPLADLSVGATASHPLGRTPPLALRFVAAEDGGWRSVEPLAEGRQRLDIRISRGTDEARYRIDLK

Specific function: The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]

COG id: COG5456

COG function: function code P; Predicted integral membrane protein linked to a cation pump

Gene ontology:

Cell location: Cell membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008620
- InterPro:   IPR018037 [H]

Pfam domain/function: PF05751 FixH [H]

EC number: NA

Molecular weight: Translated: 17413; Mature: 17282

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKRARKPFTGWHMTAILVAFFATVVAVNFTMARLAMSTFGGKVVENSYVASQQYNKLL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHH
ARAEAQDQLGWTPTVTRDPDRRVRIDIRKDGEPLADLSVGATASHPLGRTPPLALRFVAA
HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCEEEEEEEE
EDGGWRSVEPLAEGRQRLDIRISRGTDEARYRIDLK
CCCCCCCCCHHHCCHHEEEEEEECCCCCEEEEEECC
>Mature Secondary Structure 
TEKRARKPFTGWHMTAILVAFFATVVAVNFTMARLAMSTFGGKVVENSYVASQQYNKLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHH
ARAEAQDQLGWTPTVTRDPDRRVRIDIRKDGEPLADLSVGATASHPLGRTPPLALRFVAA
HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCEEEEEEEE
EDGGWRSVEPLAEGRQRLDIRISRGTDEARYRIDLK
CCCCCCCCCHHHCCHHEEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2536685; 11481432 [H]