| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is fixH [H]
Identifier: 103487156
GI number: 103487156
Start: 1759728
End: 1760198
Strand: Reverse
Name: fixH [H]
Synonym: Sala_1671
Alternate gene names: 103487156
Gene position: 1760198-1759728 (Counterclockwise)
Preceding gene: 103487157
Following gene: 103487155
Centisome position: 52.62
GC content: 65.61
Gene sequence:
>471_bases ATGACTGAAAAACGGGCCCGCAAGCCGTTCACCGGCTGGCATATGACGGCCATTCTTGTGGCTTTCTTTGCCACCGTCGT CGCGGTCAATTTCACGATGGCGCGCCTCGCCATGTCGACCTTTGGCGGCAAGGTGGTCGAGAACAGCTATGTCGCGAGCC AGCAGTACAACAAGTTGCTTGCACGCGCAGAGGCGCAGGACCAGCTGGGCTGGACACCGACGGTCACGCGCGACCCCGAC CGGCGCGTTCGCATCGACATTCGCAAGGATGGCGAGCCGCTCGCAGACCTCAGCGTCGGCGCGACGGCCAGCCATCCGCT CGGGCGCACCCCACCTCTCGCGCTTCGTTTCGTCGCCGCGGAGGATGGCGGGTGGCGTTCGGTCGAGCCGCTGGCGGAGG GGCGCCAGCGGCTCGACATCAGGATTTCCAGGGGCACGGACGAGGCGCGCTACCGGATCGACCTAAAATGA
Upstream 100 bases:
>100_bases GCCCGGCCCGGCAGGATTTCACGATCAGCACGCGCGGCCTCGACGGCGATCCGCGCGGCGACAGCGACATCATCCAGTTC GACCGTCCGGGGAGTGGACA
Downstream 100 bases:
>100_bases CCTCCGCCGCGCTCATCGAACGCGACTTCGCGGTGCCCGACATCCGCTGCGCGGGGTGCATCGCCAAGCTGGAGCAGGGG CTGGTGCGCGACAGGCGCAT
Product: integral membrane protein linked to a cation pump-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTEKRARKPFTGWHMTAILVAFFATVVAVNFTMARLAMSTFGGKVVENSYVASQQYNKLLARAEAQDQLGWTPTVTRDPD RRVRIDIRKDGEPLADLSVGATASHPLGRTPPLALRFVAAEDGGWRSVEPLAEGRQRLDIRISRGTDEARYRIDLK
Sequences:
>Translated_156_residues MTEKRARKPFTGWHMTAILVAFFATVVAVNFTMARLAMSTFGGKVVENSYVASQQYNKLLARAEAQDQLGWTPTVTRDPD RRVRIDIRKDGEPLADLSVGATASHPLGRTPPLALRFVAAEDGGWRSVEPLAEGRQRLDIRISRGTDEARYRIDLK >Mature_155_residues TEKRARKPFTGWHMTAILVAFFATVVAVNFTMARLAMSTFGGKVVENSYVASQQYNKLLARAEAQDQLGWTPTVTRDPDR RVRIDIRKDGEPLADLSVGATASHPLGRTPPLALRFVAAEDGGWRSVEPLAEGRQRLDIRISRGTDEARYRIDLK
Specific function: The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG5456
COG function: function code P; Predicted integral membrane protein linked to a cation pump
Gene ontology:
Cell location: Cell membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008620 - InterPro: IPR018037 [H]
Pfam domain/function: PF05751 FixH [H]
EC number: NA
Molecular weight: Translated: 17413; Mature: 17282
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKRARKPFTGWHMTAILVAFFATVVAVNFTMARLAMSTFGGKVVENSYVASQQYNKLL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHH ARAEAQDQLGWTPTVTRDPDRRVRIDIRKDGEPLADLSVGATASHPLGRTPPLALRFVAA HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCEEEEEEEE EDGGWRSVEPLAEGRQRLDIRISRGTDEARYRIDLK CCCCCCCCCHHHCCHHEEEEEEECCCCCEEEEEECC >Mature Secondary Structure TEKRARKPFTGWHMTAILVAFFATVVAVNFTMARLAMSTFGGKVVENSYVASQQYNKLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHH ARAEAQDQLGWTPTVTRDPDRRVRIDIRKDGEPLADLSVGATASHPLGRTPPLALRFVAA HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCEEEEEEEE EDGGWRSVEPLAEGRQRLDIRISRGTDEARYRIDLK CCCCCCCCCHHHCCHHEEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]