Click here to switch to the map view.

The map label for this gene is recG [H]

Identifier: 103487136

GI number: 103487136

Start: 1732973

End: 1735078

Strand: Reverse

Name: recG [H]

Synonym: Sala_1651

Alternate gene names: 103487136

Gene position: 1735078-1732973 (Counterclockwise)

Preceding gene: 103487139

Following gene: 103487133

Centisome position: 51.87

GC content: 69.75

Gene sequence:

>2106_bases
GTGCAAGTTGGCAAAGCTCGCGCTAAACACCGATCACCGATGCGACCCGAAATCCTCAATCCACTCTTTGCCGCGCTCAC
TGACCTGAAAGGTGTCGGGCCGCAACTCGCCAAGCCACTGACGCGGCTTGGGCTGGAGCGCCTCGTCGATGTGCTGTTCC
ATCTGCCGACGGGACTCATCTCGCGCATCGCCGTCGAGCGGCTCGATCAGGCGCAGCCCGGACAGACGATCATCGTCGAT
CTGACCGTGCAGGATTATCGTCCCGGCCGCAGCCCGCGTGCCCCGTTCGGCGTCGAGGCGTTCGATCGCGCGGGCGATCA
TGTGCGGCTCGTCTATTTCGGGCGGACATCGGGGCTGGCGCGCAAGCTGTTCCCGCTGGGCGAGACGCGCCGCGTGTCGG
GGCGGCTCGACCTGTACGGCGACATGCGCCAGATCGTCCATCCCGACCATGTCGCCGAACCCGGCGACGAAGGCGCGATA
GCTGAGCATGAGCCCGTCTATCCGCTGACCGAAGGCCTCACCAACGCGCGGCTGTCGCAGCTTGCCGCGATCGCGCTCGA
CCGGCGCCCCGACCTCGCCGAATGGATCGACGCGCCCCTGCTCGCGAGCCGCAACTGGCCCGACTGGCGCGAGGCGGTGG
CGCGCGCGCACGCCAACCCGCGCGACGAGGCCGCGCGCGACCGGCTCGCCTATGACGAGATTTTCGCCAATCAGGTCGCG
CTGATGCTGATCCGGCAGGGGCTGCGCAACCGCAGGGGGCGCGCGATCGTCGGTGACGGCCGCCTGACCGGCGCGCTACG
CCTGCCGTTCGGGCTCACGGGGGCGCAGGAGCGCGTCGGGCGCGAGATTGCGGGCGACATGGCGCAGGACACGCCGATGC
TGCGGATGCTGCAGGGCGATGTCGGGTCGGGCAAGACGCTGGTGGCGCTGCGTGCGATGCTGACCGCGGTCGAAGCGGGG
ACGCAGGCGGCGCTGCTCGCGCCGACCGAAATCCTGGCGCGCCAGCATCATGCGACCTTGCGGGCGATGCTCGCGGGCCT
GCCGGTGAACCTCGCCATCCTGACCGGGCGCGACAAGGGGCGGGTGCGCGAATCGACGCTGATGGGCCTCGCCGACGGCA
GCATCGACATATTGATCGGCACCCATGCGATTTTTCAGCAGGCGGTGACATACAGGGATCTCGCGCTCGTCGTCGTCGAC
GAACAGCATCGCTTCGGCGTCGCGCAGCGGTTGATGCTGACGCAAAAGGCGGCGCGGCCGCCGCACCTGCTGGTGATGAC
CGCGACGCCGATCCCGCGCACCCTGCTGCTCGCCAATCATGGCGAAATGGACGTGTCGCGGATCGACGAGATGCCGCCGG
GGCGCACCCCCGTCGACACGCGCGTCGTGTCGGTCGAGCGGCTCGACGAGGTGATCGCCTCGCTCGAACGCCATCTCGCG
ACGGGCGCGCAGGCCTATTGGGTGTGCCCGCTCGTCGCCGAAAGCGAGGCAAGCGAGCTGGCGGCGGCCGAGGCCCGCGC
CGCGCTGCTCGCCGAGCGGCTGGGCGCGGCGCGCGTCGGGCTGGTCCACGGGCGGATGAAAGGGCCCGAAAAGGATGACG
TCATGGCGCGCTTCCAGTCCGGCGCGATCGGCGTGCTCGTCGCCACGACCGTGATCGAGGTGGGCGTCGATGTCCCTGCC
GCCAGCCTGATGGTCGTCGAACATGCCGAGCATTTCGGCCTCGCCCAGCTGCACCAGCTGCGCGGTCGCGTCGGGCGCGG
CGCAGCGAAATCGGTGTGCCTGCTGCTGCGGTCGCCGACTCTGTCGGAGACGGCGCGCGAGCGGCTGGCGCTGATGCGCG
AGACCAACGACGGCTTCGTGATTGCCGAAAGGGATCTCGAACTGCGCGGCGGCGGTGAACTGCTGGGCCTCAAACAGTCG
GGGGAGGCCGATTATCGGCTGGCGAGCCCCGAACAGCTGGTGCGCCTGCTCCCCGTCGCGCACGACGATGCGCGGCTGTT
CGTCGAACGCGACGGCGGGATGGAGGGCGCGCGCGGCGAGGCGGTGCGGCTTTGTCTCTATCTCTTCGAACGCGATGCGG
CGGTGCCGCTGCTACGGAGCGGGTAG

Upstream 100 bases:

>100_bases
TTGCTTTGCAAGCGCATACCCCTCACCCGCTGCGACTAACGAGCAAGCTCGTAAGTCTCGCCGCCCTCTCCCGCAAGGGG
AGAGGGAGGGGAGAGGGGAG

Downstream 100 bases:

>100_bases
ATCATCATGCGCTCGATCTGACCGTCTCGAAACGAACGGAACGATGGACCGGATTGCCGACGCGTTGCCTCAGTTCACGT
CCCCGCGTGCGCCCATCGCG

Product: DEAD/DEAH box helicase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 701; Mature: 701

Protein sequence:

>701_residues
MQVGKARAKHRSPMRPEILNPLFAALTDLKGVGPQLAKPLTRLGLERLVDVLFHLPTGLISRIAVERLDQAQPGQTIIVD
LTVQDYRPGRSPRAPFGVEAFDRAGDHVRLVYFGRTSGLARKLFPLGETRRVSGRLDLYGDMRQIVHPDHVAEPGDEGAI
AEHEPVYPLTEGLTNARLSQLAAIALDRRPDLAEWIDAPLLASRNWPDWREAVARAHANPRDEAARDRLAYDEIFANQVA
LMLIRQGLRNRRGRAIVGDGRLTGALRLPFGLTGAQERVGREIAGDMAQDTPMLRMLQGDVGSGKTLVALRAMLTAVEAG
TQAALLAPTEILARQHHATLRAMLAGLPVNLAILTGRDKGRVRESTLMGLADGSIDILIGTHAIFQQAVTYRDLALVVVD
EQHRFGVAQRLMLTQKAARPPHLLVMTATPIPRTLLLANHGEMDVSRIDEMPPGRTPVDTRVVSVERLDEVIASLERHLA
TGAQAYWVCPLVAESEASELAAAEARAALLAERLGAARVGLVHGRMKGPEKDDVMARFQSGAIGVLVATTVIEVGVDVPA
ASLMVVEHAEHFGLAQLHQLRGRVGRGAAKSVCLLLRSPTLSETARERLALMRETNDGFVIAERDLELRGGGELLGLKQS
GEADYRLASPEQLVRLLPVAHDDARLFVERDGGMEGARGEAVRLCLYLFERDAAVPLLRSG

Sequences:

>Translated_701_residues
MQVGKARAKHRSPMRPEILNPLFAALTDLKGVGPQLAKPLTRLGLERLVDVLFHLPTGLISRIAVERLDQAQPGQTIIVD
LTVQDYRPGRSPRAPFGVEAFDRAGDHVRLVYFGRTSGLARKLFPLGETRRVSGRLDLYGDMRQIVHPDHVAEPGDEGAI
AEHEPVYPLTEGLTNARLSQLAAIALDRRPDLAEWIDAPLLASRNWPDWREAVARAHANPRDEAARDRLAYDEIFANQVA
LMLIRQGLRNRRGRAIVGDGRLTGALRLPFGLTGAQERVGREIAGDMAQDTPMLRMLQGDVGSGKTLVALRAMLTAVEAG
TQAALLAPTEILARQHHATLRAMLAGLPVNLAILTGRDKGRVRESTLMGLADGSIDILIGTHAIFQQAVTYRDLALVVVD
EQHRFGVAQRLMLTQKAARPPHLLVMTATPIPRTLLLANHGEMDVSRIDEMPPGRTPVDTRVVSVERLDEVIASLERHLA
TGAQAYWVCPLVAESEASELAAAEARAALLAERLGAARVGLVHGRMKGPEKDDVMARFQSGAIGVLVATTVIEVGVDVPA
ASLMVVEHAEHFGLAQLHQLRGRVGRGAAKSVCLLLRSPTLSETARERLALMRETNDGFVIAERDLELRGGGELLGLKQS
GEADYRLASPEQLVRLLPVAHDDARLFVERDGGMEGARGEAVRLCLYLFERDAAVPLLRSG
>Mature_701_residues
MQVGKARAKHRSPMRPEILNPLFAALTDLKGVGPQLAKPLTRLGLERLVDVLFHLPTGLISRIAVERLDQAQPGQTIIVD
LTVQDYRPGRSPRAPFGVEAFDRAGDHVRLVYFGRTSGLARKLFPLGETRRVSGRLDLYGDMRQIVHPDHVAEPGDEGAI
AEHEPVYPLTEGLTNARLSQLAAIALDRRPDLAEWIDAPLLASRNWPDWREAVARAHANPRDEAARDRLAYDEIFANQVA
LMLIRQGLRNRRGRAIVGDGRLTGALRLPFGLTGAQERVGREIAGDMAQDTPMLRMLQGDVGSGKTLVALRAMLTAVEAG
TQAALLAPTEILARQHHATLRAMLAGLPVNLAILTGRDKGRVRESTLMGLADGSIDILIGTHAIFQQAVTYRDLALVVVD
EQHRFGVAQRLMLTQKAARPPHLLVMTATPIPRTLLLANHGEMDVSRIDEMPPGRTPVDTRVVSVERLDEVIASLERHLA
TGAQAYWVCPLVAESEASELAAAEARAALLAERLGAARVGLVHGRMKGPEKDDVMARFQSGAIGVLVATTVIEVGVDVPA
ASLMVVEHAEHFGLAQLHQLRGRVGRGAAKSVCLLLRSPTLSETARERLALMRETNDGFVIAERDLELRGGGELLGLKQS
GEADYRLASPEQLVRLLPVAHDDARLFVERDGGMEGARGEAVRLCLYLFERDAAVPLLRSG

Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup

COG id: COG1200

COG function: function code LK; RecG-like helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI2367254, Length=670, Percent_Identity=41.6417910447761, Blast_Score=427, Evalue=1e-121,
Organism=Escherichia coli, GI1787357, Length=380, Percent_Identity=39.7368421052632, Blast_Score=248, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR004609
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 76298; Mature: 76298

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVGKARAKHRSPMRPEILNPLFAALTDLKGVGPQLAKPLTRLGLERLVDVLFHLPTGLI
CCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
SRIAVERLDQAQPGQTIIVDLTVQDYRPGRSPRAPFGVEAFDRAGDHVRLVYFGRTSGLA
HHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCHH
RKLFPLGETRRVSGRLDLYGDMRQIVHPDHVAEPGDEGAIAEHEPVYPLTEGLTNARLSQ
HHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHH
LAAIALDRRPDLAEWIDAPLLASRNWPDWREAVARAHANPRDEAARDRLAYDEIFANQVA
HHHHHHCCCCCHHHHHCCCHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LMLIRQGLRNRRGRAIVGDGRLTGALRLPFGLTGAQERVGREIAGDMAQDTPMLRMLQGD
HHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCC
VGSGKTLVALRAMLTAVEAGTQAALLAPTEILARQHHATLRAMLAGLPVNLAILTGRDKG
CCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
RVRESTLMGLADGSIDILIGTHAIFQQAVTYRDLALVVVDEQHRFGVAQRLMLTQKAARP
CHHHHHHHEECCCCEEEEECCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCC
PHLLVMTATPIPRTLLLANHGEMDVSRIDEMPPGRTPVDTRVVSVERLDEVIASLERHLA
CEEEEEECCCCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TGAQAYWVCPLVAESEASELAAAEARAALLAERLGAARVGLVHGRMKGPEKDDVMARFQS
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHHHC
GAIGVLVATTVIEVGVDVPAASLMVVEHAEHFGLAQLHQLRGRVGRGAAKSVCLLLRSPT
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCC
LSETARERLALMRETNDGFVIAERDLELRGGGELLGLKQSGEADYRLASPEQLVRLLPVA
HHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCEEEECCCCCCCEEECCHHHHHHHHCCC
HDDARLFVERDGGMEGARGEAVRLCLYLFERDAAVPLLRSG
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQVGKARAKHRSPMRPEILNPLFAALTDLKGVGPQLAKPLTRLGLERLVDVLFHLPTGLI
CCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
SRIAVERLDQAQPGQTIIVDLTVQDYRPGRSPRAPFGVEAFDRAGDHVRLVYFGRTSGLA
HHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCHH
RKLFPLGETRRVSGRLDLYGDMRQIVHPDHVAEPGDEGAIAEHEPVYPLTEGLTNARLSQ
HHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHH
LAAIALDRRPDLAEWIDAPLLASRNWPDWREAVARAHANPRDEAARDRLAYDEIFANQVA
HHHHHHCCCCCHHHHHCCCHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LMLIRQGLRNRRGRAIVGDGRLTGALRLPFGLTGAQERVGREIAGDMAQDTPMLRMLQGD
HHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCC
VGSGKTLVALRAMLTAVEAGTQAALLAPTEILARQHHATLRAMLAGLPVNLAILTGRDKG
CCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
RVRESTLMGLADGSIDILIGTHAIFQQAVTYRDLALVVVDEQHRFGVAQRLMLTQKAARP
CHHHHHHHEECCCCEEEEECCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCC
PHLLVMTATPIPRTLLLANHGEMDVSRIDEMPPGRTPVDTRVVSVERLDEVIASLERHLA
CEEEEEECCCCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TGAQAYWVCPLVAESEASELAAAEARAALLAERLGAARVGLVHGRMKGPEKDDVMARFQS
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHHHHC
GAIGVLVATTVIEVGVDVPAASLMVVEHAEHFGLAQLHQLRGRVGRGAAKSVCLLLRSPT
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCC
LSETARERLALMRETNDGFVIAERDLELRGGGELLGLKQSGEADYRLASPEQLVRLLPVA
HHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCEEEECCCCCCCEEECCHHHHHHHHCCC
HDDARLFVERDGGMEGARGEAVRLCLYLFERDAAVPLLRSG
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]