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The map label for this gene is 103487133

Identifier: 103487133

GI number: 103487133

Start: 1730852

End: 1731205

Strand: Reverse

Name: 103487133

Synonym: Sala_1648

Alternate gene names: NA

Gene position: 1731205-1730852 (Counterclockwise)

Preceding gene: 103487136

Following gene: 103487132

Centisome position: 51.75

GC content: 57.06

Gene sequence:

>354_bases
TTGTCGAAGGGCCGTTCTTCCTTTTACACCGTGCCCATGAGCTTTTGGGCCTATATGTTGCATTGCCGCGGAGGGGCCTT
TTACACCGGTCACACGGACAATCTCCCATATCGTGTCGCGCAGCACGAATCCGGCGCCATCCAAGGGTTCACGGCGGACA
AATTGCCAGTGACGCTCGTGTGGAGTCAGGAGTTTCCGACGCGGATCGAAGCCTTGGAAGCCGAACGCCGGATTAAGGGG
TGGAGCCGCGCGAAAAAAATGGCATTGATCCGCGGCGATTGGGACAGCATTTCGAACTTGGCAAAAGGGAAGAACGGTCC
TTCGACAGGCTCAGGACGAACGGAGAGGGACTGA

Upstream 100 bases:

>100_bases
CGCTCGTCGAGAAGGCGCAGCAGGTCGGATTGATAGTTGGTCATAGCGGGCGGGCGCTTAGCATGACGTCGAAGCAAACC
CAACACCGTTCGCCCTGAGC

Downstream 100 bases:

>100_bases
ATGTCGGCTCATTCCAGCGAACGACGTCAACTCATCTGTCACCCCGGCACGCCCGCGCGCGCCGTGCGGTCGGTTGCGGT
CGAGGTCAGCCTGTCGTTCG

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: Excinuclease ABC Subunit C; Excinuclease ABC C Subunit-Like Protein; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease Abc C Subunit Domain Protein; rRNA Methylase; TRNA/RRNA Methyltransferase; Endonuclease Containing A URI Domain-Containing Protein; GIY-YIG Catalytic Domain Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease; Excinuclease ABC Subunit C-Like Protein

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSKGRSSFYTVPMSFWAYMLHCRGGAFYTGHTDNLPYRVAQHESGAIQGFTADKLPVTLVWSQEFPTRIEALEAERRIKG
WSRAKKMALIRGDWDSISNLAKGKNGPSTGSGRTERD

Sequences:

>Translated_117_residues
MSKGRSSFYTVPMSFWAYMLHCRGGAFYTGHTDNLPYRVAQHESGAIQGFTADKLPVTLVWSQEFPTRIEALEAERRIKG
WSRAKKMALIRGDWDSISNLAKGKNGPSTGSGRTERD
>Mature_116_residues
SKGRSSFYTVPMSFWAYMLHCRGGAFYTGHTDNLPYRVAQHESGAIQGFTADKLPVTLVWSQEFPTRIEALEAERRIKGW
SRAKKMALIRGDWDSISNLAKGKNGPSTGSGRTERD

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13129; Mature: 12998

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGRSSFYTVPMSFWAYMLHCRGGAFYTGHTDNLPYRVAQHESGAIQGFTADKLPVTLV
CCCCCCCEEEEHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEE
WSQEFPTRIEALEAERRIKGWSRAKKMALIRGDWDSISNLAKGKNGPSTGSGRTERD
ECCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKGRSSFYTVPMSFWAYMLHCRGGAFYTGHTDNLPYRVAQHESGAIQGFTADKLPVTLV
CCCCCCEEEEHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEE
WSQEFPTRIEALEAERRIKGWSRAKKMALIRGDWDSISNLAKGKNGPSTGSGRTERD
ECCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA