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The map label for this gene is bdlA [H]

Identifier: 103487126

GI number: 103487126

Start: 1723042

End: 1724484

Strand: Reverse

Name: bdlA [H]

Synonym: Sala_1641

Alternate gene names: 103487126

Gene position: 1724484-1723042 (Counterclockwise)

Preceding gene: 103487130

Following gene: 103487118

Centisome position: 51.55

GC content: 65.0

Gene sequence:

>1443_bases
ATGTTCGGCATAGCTTCGCGATCATTCTGCGATGTGGGCAAGCCAATGAAATATGATCCGATCAATCCGGCGGCGCCGAT
CCTCGACGAGTCGGTTGCGAGCGATTGCGGTGAGCTGGCGGTGGGGTGCAGCGATGCCGCGGGGCGGATCAAGCGCGCGA
CCGACCAGATGGACCGCCAGATCGCCGAGCTTGGCCGGCTCGAGGAATATGTCGTCGGCCTCGAGGCCGACCAGCGCCAG
ATCGCCGATTCGACCGACGAAGCGAAGCTGTTGTCGGCGCGCGCGCGCGAGCAACTCGACGCCGGCGCCGAGCGGGTCAA
TTTGGCGGTCAGCGAGTTCCGCTCGGTGATCGACCTGATCGCGCGGCTGGGCACGCATGTCACCAATTTCGCCGCGGTGA
TGGAACAGGTGCAGCAGGTCAGCCAGTCGATCGAATCGATCGCCAAGACGACCAACATGCTCGCACTCAACGCCGCGATC
GAGGCCGAACGTGCGGGCGATTCCGGCCGCACCTTTGCCGTCGTCGCCGCCGAGGTGAAGAAGCTCGCGCAGAATACGCG
CGGCGCGACCGACGAAATCCGCCGCTCGATCGGCAGCCTCGCCGCCGAAGCGGGCGGGCTGGTCACCGAAATCCAGTCGG
GGGTCGAACAGTCGAGCCGCGCCGAGGCGCAGTTCGAAACGATCACCGACGCGCTTCACGATGCGACGCACCTCGTCGCG
CTGCTCGACGACCAGAGCGACCGCATCGCGCAATCGAGCGCGATGGTCCATGCGAACGGCGCCAAGGTGCGCGAGGCGCT
CGACCGCGTCGTCACATCGGTGCGCGATAATAGTTCGACGCTGGCAGGCACGCGCGATTCGATCCTGACGATGGAGCATG
TGTCGAACCGCATGTTCAATGCGGTGATCTCCGCCGGGGTCAGCCCGCAGGATTCGGCGATCGTCGCGCTCGCGGCCAAG
GTGCGCGACGAATTTGTCGCGATTGCCGAACGCGCGCTGGCGCGCGGCGAACTGACGATGGAGCAATTGTTCGACACCGA
TTATGTGCGCGTGCCCAACTCGAACCCCGAACGCTTTCGCACCAGTTTGTGCGACTGGGCCGACGCCAACTGGCGGCCGC
TGTTCGACCGCATCGTCGCCGAACATCCCGAGATCAAGATGTCGTCCGCCGGGGACATGAACGGCTTTCTGCCGACGCAC
ATCACCGACTGTTCGCGCGCGCCGACCGGCGACCTTGAACATGACACCGCCCACTGCCGCAACGGTCGCATCCTGTATGA
CGAGACCGATGCGGCCGCGAAGCGCAGCACGGCGCCCTTTTTCATGACCGTCTATCGCCAGGAAGGCGACGGGATCAATT
ATCTGACCGTGCGCAACGTCTATATGCCCGCGATCATCGGCGGCCGCCGCTGGGGCGACGTCGAGGTGGCCTATCAGCTC
TGA

Upstream 100 bases:

>100_bases
AAAACGGCTATTCGGTGATGAAGGGGGCGTCTGCTTGCGTCCGCTCGTCACCCCGAAGCCGCCACGTCCGCGCCTTCACC
CGTTGACGCCCCGTTAACCA

Downstream 100 bases:

>100_bases
GCAGGGAGCGGGTCGAGCACCCGCGCGATCAGATCGGTGTCGGTATATTCGGTGATCTCCGCCACTTTTCCGGTATGGAA
GCGGAACGTCCAGCTATAGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MFGIASRSFCDVGKPMKYDPINPAAPILDESVASDCGELAVGCSDAAGRIKRATDQMDRQIAELGRLEEYVVGLEADQRQ
IADSTDEAKLLSARAREQLDAGAERVNLAVSEFRSVIDLIARLGTHVTNFAAVMEQVQQVSQSIESIAKTTNMLALNAAI
EAERAGDSGRTFAVVAAEVKKLAQNTRGATDEIRRSIGSLAAEAGGLVTEIQSGVEQSSRAEAQFETITDALHDATHLVA
LLDDQSDRIAQSSAMVHANGAKVREALDRVVTSVRDNSSTLAGTRDSILTMEHVSNRMFNAVISAGVSPQDSAIVALAAK
VRDEFVAIAERALARGELTMEQLFDTDYVRVPNSNPERFRTSLCDWADANWRPLFDRIVAEHPEIKMSSAGDMNGFLPTH
ITDCSRAPTGDLEHDTAHCRNGRILYDETDAAAKRSTAPFFMTVYRQEGDGINYLTVRNVYMPAIIGGRRWGDVEVAYQL

Sequences:

>Translated_480_residues
MFGIASRSFCDVGKPMKYDPINPAAPILDESVASDCGELAVGCSDAAGRIKRATDQMDRQIAELGRLEEYVVGLEADQRQ
IADSTDEAKLLSARAREQLDAGAERVNLAVSEFRSVIDLIARLGTHVTNFAAVMEQVQQVSQSIESIAKTTNMLALNAAI
EAERAGDSGRTFAVVAAEVKKLAQNTRGATDEIRRSIGSLAAEAGGLVTEIQSGVEQSSRAEAQFETITDALHDATHLVA
LLDDQSDRIAQSSAMVHANGAKVREALDRVVTSVRDNSSTLAGTRDSILTMEHVSNRMFNAVISAGVSPQDSAIVALAAK
VRDEFVAIAERALARGELTMEQLFDTDYVRVPNSNPERFRTSLCDWADANWRPLFDRIVAEHPEIKMSSAGDMNGFLPTH
ITDCSRAPTGDLEHDTAHCRNGRILYDETDAAAKRSTAPFFMTVYRQEGDGINYLTVRNVYMPAIIGGRRWGDVEVAYQL
>Mature_480_residues
MFGIASRSFCDVGKPMKYDPINPAAPILDESVASDCGELAVGCSDAAGRIKRATDQMDRQIAELGRLEEYVVGLEADQRQ
IADSTDEAKLLSARAREQLDAGAERVNLAVSEFRSVIDLIARLGTHVTNFAAVMEQVQQVSQSIESIAKTTNMLALNAAI
EAERAGDSGRTFAVVAAEVKKLAQNTRGATDEIRRSIGSLAAEAGGLVTEIQSGVEQSSRAEAQFETITDALHDATHLVA
LLDDQSDRIAQSSAMVHANGAKVREALDRVVTSVRDNSSTLAGTRDSILTMEHVSNRMFNAVISAGVSPQDSAIVALAAK
VRDEFVAIAERALARGELTMEQLFDTDYVRVPNSNPERFRTSLCDWADANWRPLFDRIVAEHPEIKMSSAGDMNGFLPTH
ITDCSRAPTGDLEHDTAHCRNGRILYDETDAAAKRSTAPFFMTVYRQEGDGINYLTVRNVYMPAIIGGRRWGDVEVAYQL

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=232, Percent_Identity=29.3103448275862, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1789453, Length=210, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI2367378, Length=233, Percent_Identity=27.8969957081545, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788195, Length=227, Percent_Identity=28.1938325991189, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 52154; Mature: 52154

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGIASRSFCDVGKPMKYDPINPAAPILDESVASDCGELAVGCSDAAGRIKRATDQMDRQ
CCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IAELGRLEEYVVGLEADQRQIADSTDEAKLLSARAREQLDAGAERVNLAVSEFRSVIDLI
HHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ARLGTHVTNFAAVMEQVQQVSQSIESIAKTTNMLALNAAIEAERAGDSGRTFAVVAAEVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCEEEHHHHHHH
KLAQNTRGATDEIRRSIGSLAAEAGGLVTEIQSGVEQSSRAEAQFETITDALHDATHLVA
HHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDDQSDRIAQSSAMVHANGAKVREALDRVVTSVRDNSSTLAGTRDSILTMEHVSNRMFN
EECCCCHHHHHHCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
AVISAGVSPQDSAIVALAAKVRDEFVAIAERALARGELTMEQLFDTDYVRVPNSNPERFR
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEECCCCCHHHHH
TSLCDWADANWRPLFDRIVAEHPEIKMSSAGDMNGFLPTHITDCSRAPTGDLEHDTAHCR
HHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
NGRILYDETDAAAKRSTAPFFMTVYRQEGDGINYLTVRNVYMPAIIGGRRWGDVEVAYQL
CCEEEEECCCHHHHCCCCCEEEEEEEECCCCCCEEEEECCHHHHEECCCCCCCEEEEEEC
>Mature Secondary Structure
MFGIASRSFCDVGKPMKYDPINPAAPILDESVASDCGELAVGCSDAAGRIKRATDQMDRQ
CCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IAELGRLEEYVVGLEADQRQIADSTDEAKLLSARAREQLDAGAERVNLAVSEFRSVIDLI
HHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ARLGTHVTNFAAVMEQVQQVSQSIESIAKTTNMLALNAAIEAERAGDSGRTFAVVAAEVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCEEEHHHHHHH
KLAQNTRGATDEIRRSIGSLAAEAGGLVTEIQSGVEQSSRAEAQFETITDALHDATHLVA
HHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDDQSDRIAQSSAMVHANGAKVREALDRVVTSVRDNSSTLAGTRDSILTMEHVSNRMFN
EECCCCHHHHHHCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
AVISAGVSPQDSAIVALAAKVRDEFVAIAERALARGELTMEQLFDTDYVRVPNSNPERFR
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEECCCCCHHHHH
TSLCDWADANWRPLFDRIVAEHPEIKMSSAGDMNGFLPTHITDCSRAPTGDLEHDTAHCR
HHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
NGRILYDETDAAAKRSTAPFFMTVYRQEGDGINYLTVRNVYMPAIIGGRRWGDVEVAYQL
CCEEEEECCCHHHHCCCCCEEEEEEEECCCCCCEEEEECCHHHHEECCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]