The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487057

Identifier: 103487057

GI number: 103487057

Start: 1644054

End: 1645562

Strand: Reverse

Name: 103487057

Synonym: Sala_1572

Alternate gene names: NA

Gene position: 1645562-1644054 (Counterclockwise)

Preceding gene: 103487058

Following gene: 103487056

Centisome position: 49.19

GC content: 62.43

Gene sequence:

>1509_bases
ATGTTCGCTTCTCTGGCCCGTAATGTCGCGCTGACCGGCGTTGCCTATTTCATCGTGAGCCTGATTGGCCTGCTGCTGGC
CCCCGTTCTGATCGCGGCCTATGGCGTGGTGGGCTATGGCCAAATCATTCTGGCGCGCATTTTCCTCCCGAGCGCGGCTT
TCGGATTTCTGGATCTCGGCGTCGGGGAAAACAGCACCCGCCTGGTTGCAAACGCCCGTGCGAGCGGCAACTGGCTCGGC
GCGGCACAGGGCATCACCGTACTCTGTGTCATTTCGCTTGCGGTGTCCCTGACCGCGGCTGGCGCAGTCGCCCTGGCGGC
GGACCATATTGCAGGCTGGCTGTCGATCCCGTCCGCGCAGCGGCATGGTTTTGCGGGTGTTCTGCGGGTGACCGCCGCAA
TGCTTCCCTTTCTGTTCCTCTCGCTGGTTGCCGAAGGGATCATCAAGGGGTTTGAACGTTTCGGACAGTTACGCAGCTGC
GAAGTCGCCTCTGCGCTGACGTTCGGCATCGCAGCGCTGATCCTCGTCGATCGCGGCCATGATGCCAACGCCATATGCAT
GGCCTTTCTGGCGGGAGTCGTGCTGCGTGCCGCCATGGCCACCCTCTTTGCGGTCGGCCTGTGTCGCGAAAGCGGCCTTC
GGCTGGCTCGATATGACCGGACGACGCGGCGGGAAATCTTCGCCTGGTCCCGCACGATGCTGTCGAACAAATTGCTCGGC
GTCATGCAGACGCAGATGGCATCCCCCCTTCTCGGTTTCCTCGCCGGACCGGCGGCCGTCGGCCTGTTCGATGCGATCGT
CCGGATTCCGCGGTTCGCCAAGTCGATCTTTTCGCTGACCAGCAGCACGGTCGTGCCCCTGGCGGCGCGCCTGCAGGCCG
GGGGCGAAGCCGCGGCCGTGTCGAAACTCGGACTGGTGGGGACGTTGACGGCTTTCGTGCTGTTCGCGCCGGCGACCGTC
ATGGCCATGGCATTTGCCAGACCGATCATTCACCATTGGCTGGGGAGCGCGATCGAACCCCATTGGGTCTGGCTGAGCCT
GATGCTTTTCGTGCCCCTGCTCGGTGTATCGACAAGCTTTGGCGGTTCGATGCTGCTGGCCAGGCATGATGCGGTCAGGC
GACTGAACCGTCTGGCGCTGATCCAGGTCACGCTGCAGATCGGCCTGTCGCTGGTGCTGCTGCCGCTCGTGTCGCCCTGG
AGTTTCGTGATCGGCCAGGTTGCCAGCGTCATCGCCGTTTATCCTTTCCAGATCGACCTGATCCGGCGCGATCTTGGAAT
GGGAAATGGCCTGTTCCGCTGGCTTTTGATTATCTTTGTCAGTTCGCTGGGGGTTTCGCTTCTGTGCCGGGCGGCCGCTC
CTGCACCGGATTTGGCGGAACTGGTCCTGATTCTGACCGGCGTCAGCGTGATCTGGACGGTGATGCTCATTGCGTTGATG
ATCAAACCTGACGAGCGCGCCAGGCTTTGGCAACATATTCGGTCGCTGGCGCAAAACAGGAACGCATGA

Upstream 100 bases:

>100_bases
CAGCATGACGGCGGCGCAGGTCGACCGGGTTGCAGAGGCGCTTCGCACGGCTGTCGCACGCGCCCGCCGGGCGAACCGGG
TCGCCTGACCGCATCGGACG

Downstream 100 bases:

>100_bases
GCATATGGGTATAAGGCCGGCAATTCTATCGAGAAGGGAATGGACTATGGCGTCGCTGTCGAAACGGGTGCTGTGGCATA
TCAACCGGTCGCCGCTCAGG

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MFASLARNVALTGVAYFIVSLIGLLLAPVLIAAYGVVGYGQIILARIFLPSAAFGFLDLGVGENSTRLVANARASGNWLG
AAQGITVLCVISLAVSLTAAGAVALAADHIAGWLSIPSAQRHGFAGVLRVTAAMLPFLFLSLVAEGIIKGFERFGQLRSC
EVASALTFGIAALILVDRGHDANAICMAFLAGVVLRAAMATLFAVGLCRESGLRLARYDRTTRREIFAWSRTMLSNKLLG
VMQTQMASPLLGFLAGPAAVGLFDAIVRIPRFAKSIFSLTSSTVVPLAARLQAGGEAAAVSKLGLVGTLTAFVLFAPATV
MAMAFARPIIHHWLGSAIEPHWVWLSLMLFVPLLGVSTSFGGSMLLARHDAVRRLNRLALIQVTLQIGLSLVLLPLVSPW
SFVIGQVASVIAVYPFQIDLIRRDLGMGNGLFRWLLIIFVSSLGVSLLCRAAAPAPDLAELVLILTGVSVIWTVMLIALM
IKPDERARLWQHIRSLAQNRNA

Sequences:

>Translated_502_residues
MFASLARNVALTGVAYFIVSLIGLLLAPVLIAAYGVVGYGQIILARIFLPSAAFGFLDLGVGENSTRLVANARASGNWLG
AAQGITVLCVISLAVSLTAAGAVALAADHIAGWLSIPSAQRHGFAGVLRVTAAMLPFLFLSLVAEGIIKGFERFGQLRSC
EVASALTFGIAALILVDRGHDANAICMAFLAGVVLRAAMATLFAVGLCRESGLRLARYDRTTRREIFAWSRTMLSNKLLG
VMQTQMASPLLGFLAGPAAVGLFDAIVRIPRFAKSIFSLTSSTVVPLAARLQAGGEAAAVSKLGLVGTLTAFVLFAPATV
MAMAFARPIIHHWLGSAIEPHWVWLSLMLFVPLLGVSTSFGGSMLLARHDAVRRLNRLALIQVTLQIGLSLVLLPLVSPW
SFVIGQVASVIAVYPFQIDLIRRDLGMGNGLFRWLLIIFVSSLGVSLLCRAAAPAPDLAELVLILTGVSVIWTVMLIALM
IKPDERARLWQHIRSLAQNRNA
>Mature_502_residues
MFASLARNVALTGVAYFIVSLIGLLLAPVLIAAYGVVGYGQIILARIFLPSAAFGFLDLGVGENSTRLVANARASGNWLG
AAQGITVLCVISLAVSLTAAGAVALAADHIAGWLSIPSAQRHGFAGVLRVTAAMLPFLFLSLVAEGIIKGFERFGQLRSC
EVASALTFGIAALILVDRGHDANAICMAFLAGVVLRAAMATLFAVGLCRESGLRLARYDRTTRREIFAWSRTMLSNKLLG
VMQTQMASPLLGFLAGPAAVGLFDAIVRIPRFAKSIFSLTSSTVVPLAARLQAGGEAAAVSKLGLVGTLTAFVLFAPATV
MAMAFARPIIHHWLGSAIEPHWVWLSLMLFVPLLGVSTSFGGSMLLARHDAVRRLNRLALIQVTLQIGLSLVLLPLVSPW
SFVIGQVASVIAVYPFQIDLIRRDLGMGNGLFRWLLIIFVSSLGVSLLCRAAAPAPDLAELVLILTGVSVIWTVMLIALM
IKPDERARLWQHIRSLAQNRNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53397; Mature: 53397

Theoretical pI: Translated: 11.38; Mature: 11.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFASLARNVALTGVAYFIVSLIGLLLAPVLIAAYGVVGYGQIILARIFLPSAAFGFLDLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VGENSTRLVANARASGNWLGAAQGITVLCVISLAVSLTAAGAVALAADHIAGWLSIPSAQ
CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RHGFAGVLRVTAAMLPFLFLSLVAEGIIKGFERFGQLRSCEVASALTFGIAALILVDRGH
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCC
DANAICMAFLAGVVLRAAMATLFAVGLCRESGLRLARYDRTTRREIFAWSRTMLSNKLLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH
VMQTQMASPLLGFLAGPAAVGLFDAIVRIPRFAKSIFSLTSSTVVPLAARLQAGGEAAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
SKLGLVGTLTAFVLFAPATVMAMAFARPIIHHWLGSAIEPHWVWLSLMLFVPLLGVSTSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
GGSMLLARHDAVRRLNRLALIQVTLQIGLSLVLLPLVSPWSFVIGQVASVIAVYPFQIDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IRRDLGMGNGLFRWLLIIFVSSLGVSLLCRAAAPAPDLAELVLILTGVSVIWTVMLIALM
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IKPDERARLWQHIRSLAQNRNA
CCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFASLARNVALTGVAYFIVSLIGLLLAPVLIAAYGVVGYGQIILARIFLPSAAFGFLDLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VGENSTRLVANARASGNWLGAAQGITVLCVISLAVSLTAAGAVALAADHIAGWLSIPSAQ
CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RHGFAGVLRVTAAMLPFLFLSLVAEGIIKGFERFGQLRSCEVASALTFGIAALILVDRGH
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCC
DANAICMAFLAGVVLRAAMATLFAVGLCRESGLRLARYDRTTRREIFAWSRTMLSNKLLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHH
VMQTQMASPLLGFLAGPAAVGLFDAIVRIPRFAKSIFSLTSSTVVPLAARLQAGGEAAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
SKLGLVGTLTAFVLFAPATVMAMAFARPIIHHWLGSAIEPHWVWLSLMLFVPLLGVSTSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
GGSMLLARHDAVRRLNRLALIQVTLQIGLSLVLLPLVSPWSFVIGQVASVIAVYPFQIDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IRRDLGMGNGLFRWLLIIFVSSLGVSLLCRAAAPAPDLAELVLILTGVSVIWTVMLIALM
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IKPDERARLWQHIRSLAQNRNA
CCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA