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The map label for this gene is cycK [H]

Identifier: 103487001

GI number: 103487001

Start: 1582264

End: 1584234

Strand: Reverse

Name: cycK [H]

Synonym: Sala_1516

Alternate gene names: 103487001

Gene position: 1584234-1582264 (Counterclockwise)

Preceding gene: 103487002

Following gene: 103487000

Centisome position: 47.36

GC content: 65.96

Gene sequence:

>1971_bases
ATGATCGCCGAACTCGGCCTTGCCCTGCTGTGGATCGCGGCGGCGCTCGCGTGCCTGTCACTCGTCGCGGGAACCTTGTT
CCTGCGCGGCGGACCGGGGGATCTGGCGGCGCTGGTGCGACCGGCGAGCGTCGCGCAGGGTGTGCTTACCACGGCCGCCT
TTGGTCTGCTCATCGCGCTGTTCGTGCGGTCCGACATGTCGGTCGAGCTGGTCGCGCGCAACAGCAACAGTTTGAAGCCG
ATGATCTTCAAGATTGCCGGGACATGGGGCAATCACGAAGGGTCGATGCTGCTGTGGCTGATGATCCTGTCGCTGTCGGG
GGCGCTGATCGCGCTTTTCGAAAAGCGGCTGCGCGAGGATACGCTGATTGCGACGCTGGCGGCGCAGGCGGCGCTGAGCC
TCGGCTTTTTCGCCTTTCTGCTTTTCTCTTCCAATCCCTTCAAGCGGTTGCCGGTCGCGCCTCCCGACGGGCAGGGCCTG
AACCCGCTGCTTCAGGACATCGGTTTGGCCTTTCACCCGCCGACGCTTTACGTCGGCTATGTCGGGCTGTCGGTCGCGTT
CAGCTTTGCCGTGGGCGCGCTGATCACGCGCGAGATCGGTCCGGCCTTCGCGCGCGCGATGCGGCCGTGGGTGCTGGGAA
GCTGGATCTTCCTGACCCTGGGCATCACCGCGGGGAGTTACTGGGCCTATTATGAACTCGGCTGGGGCGGCTGGTGGTTC
TGGGATCCGGTCGAGAATGTCTCGCTCGTGCCCTGGCTCGCGGGCGCGGCGCTGCTCCATTCGGTCGCGGTCACGGCGAC
GCGTAACGCGCTGCGCGCGTGGACGGTGATGCTCGCGGTGATCGGCTTTTCGATGTCGATGGTCGGCACCTTCATCGTGC
GGTCGGGTCTGCTCACGAGCGTCCACAGCTTTGCCGTCGATCCCGAGCGCGGCACCTTTCTGCTCGTGCTGATGGCGATC
TATATCGGCGGCGCGCTGACCCTTTTTGCCCTGCGCGCCGGGTCGGTTGCCGAAGGAAAGAAATTTGCGCTGCTGAGCCG
CGAAGGCTCGCTCGTGATCAACAACCTGCTGCTTACGACGATCCTCGCGCTCGTCCTTCTCGGCACGCTCTATCCGATCG
TCGCCGAGGCGATGGGCGAGAAGATTTCCGTCGGTCCGCCCTATTATAACAAGGTGGCGGGGCCGCTCGCGCTGATCCTC
TGCCTCGTGATGGTTGCCGGGCCGTTGCTCAGCTGGCGCAAGGACGACGGCAAACGGCTGTGGTCGCGCCTGCCTGTCGC
GATCTTCGCCGGGGCGGCGATACTGTTCGCGTTGATCCTGTTCGGCGGCAAGGTCGGTATCCTGCCGCTGCTCGGCATGA
CCGTCGCGGGCATCGTCGCGGTCGCGAGCCTGGCGCCCTTGTGGGGCCGCAACCTCCGCCGCGTGCCTTTGCCGACCTGG
GGCATGGTCGTCGCGCATTTCGGCGTCGGTGTGTGCCTCGCCGGCATGGGAGCAGAGAGCGCGTTCATCAAGGAAAGGCT
GGTCGCCGCCGCGCCCGGCGAGACGATCCGCATCGCCGATTTTTCGGTGAAGTTCGTCGGCGTGAAGCCCCTGGCCGGGC
CGAACTATACTGCCATTGAGGGCGCGCTGGTCGCGACCACCCCATCGGGCAGCAGCTTTACGATGAAACCCGAAGCGCGA
ACCTTTCCGGGGCTGATGGGCACGGCACCGACCGAAACGAACGAGGCGGCATTGCTGACGCGGCCGGGCGGGCAGCTTTA
TGCAGTGCTCGGCCAGCCGGTGACGGGCGAGGATGGCCGCGCCGACCGCTACCAGATTCGCCTGTGGTGGAAACCGTTGG
TGTGGTGGATATGGCTTGGCGGCGGCCTGATCGCGCTCGGCGCCACTTTGTCGCTGCTTGGACGCGCGCAGCTGCTCGCC
ATGTGGCGCGCGCGCCGGCACCGCAAATCACAGGAGCGTTTTGCGCCATGA

Upstream 100 bases:

>100_bases
GAAGCAATCTCCTGCGTGCGGCCTTTTACCCTGAGAGCTGGAGACTGCTTCGTCGCTTCGCTCCTCGCAATGACGACGTG
TGGTGTAAGGGCATAGCCAG

Downstream 100 bases:

>100_bases
CGAACCGCTGGGTCTTGTTTGTGCCGCTGGCGATCATGGGGCTGTTGTTCGGCGCCTTCATCTACCGACTGGTGACGCCC
GCCGAAACGCTGATCCAGTC

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 656; Mature: 656

Protein sequence:

>656_residues
MIAELGLALLWIAAALACLSLVAGTLFLRGGPGDLAALVRPASVAQGVLTTAAFGLLIALFVRSDMSVELVARNSNSLKP
MIFKIAGTWGNHEGSMLLWLMILSLSGALIALFEKRLREDTLIATLAAQAALSLGFFAFLLFSSNPFKRLPVAPPDGQGL
NPLLQDIGLAFHPPTLYVGYVGLSVAFSFAVGALITREIGPAFARAMRPWVLGSWIFLTLGITAGSYWAYYELGWGGWWF
WDPVENVSLVPWLAGAALLHSVAVTATRNALRAWTVMLAVIGFSMSMVGTFIVRSGLLTSVHSFAVDPERGTFLLVLMAI
YIGGALTLFALRAGSVAEGKKFALLSREGSLVINNLLLTTILALVLLGTLYPIVAEAMGEKISVGPPYYNKVAGPLALIL
CLVMVAGPLLSWRKDDGKRLWSRLPVAIFAGAAILFALILFGGKVGILPLLGMTVAGIVAVASLAPLWGRNLRRVPLPTW
GMVVAHFGVGVCLAGMGAESAFIKERLVAAAPGETIRIADFSVKFVGVKPLAGPNYTAIEGALVATTPSGSSFTMKPEAR
TFPGLMGTAPTETNEAALLTRPGGQLYAVLGQPVTGEDGRADRYQIRLWWKPLVWWIWLGGGLIALGATLSLLGRAQLLA
MWRARRHRKSQERFAP

Sequences:

>Translated_656_residues
MIAELGLALLWIAAALACLSLVAGTLFLRGGPGDLAALVRPASVAQGVLTTAAFGLLIALFVRSDMSVELVARNSNSLKP
MIFKIAGTWGNHEGSMLLWLMILSLSGALIALFEKRLREDTLIATLAAQAALSLGFFAFLLFSSNPFKRLPVAPPDGQGL
NPLLQDIGLAFHPPTLYVGYVGLSVAFSFAVGALITREIGPAFARAMRPWVLGSWIFLTLGITAGSYWAYYELGWGGWWF
WDPVENVSLVPWLAGAALLHSVAVTATRNALRAWTVMLAVIGFSMSMVGTFIVRSGLLTSVHSFAVDPERGTFLLVLMAI
YIGGALTLFALRAGSVAEGKKFALLSREGSLVINNLLLTTILALVLLGTLYPIVAEAMGEKISVGPPYYNKVAGPLALIL
CLVMVAGPLLSWRKDDGKRLWSRLPVAIFAGAAILFALILFGGKVGILPLLGMTVAGIVAVASLAPLWGRNLRRVPLPTW
GMVVAHFGVGVCLAGMGAESAFIKERLVAAAPGETIRIADFSVKFVGVKPLAGPNYTAIEGALVATTPSGSSFTMKPEAR
TFPGLMGTAPTETNEAALLTRPGGQLYAVLGQPVTGEDGRADRYQIRLWWKPLVWWIWLGGGLIALGATLSLLGRAQLLA
MWRARRHRKSQERFAP
>Mature_656_residues
MIAELGLALLWIAAALACLSLVAGTLFLRGGPGDLAALVRPASVAQGVLTTAAFGLLIALFVRSDMSVELVARNSNSLKP
MIFKIAGTWGNHEGSMLLWLMILSLSGALIALFEKRLREDTLIATLAAQAALSLGFFAFLLFSSNPFKRLPVAPPDGQGL
NPLLQDIGLAFHPPTLYVGYVGLSVAFSFAVGALITREIGPAFARAMRPWVLGSWIFLTLGITAGSYWAYYELGWGGWWF
WDPVENVSLVPWLAGAALLHSVAVTATRNALRAWTVMLAVIGFSMSMVGTFIVRSGLLTSVHSFAVDPERGTFLLVLMAI
YIGGALTLFALRAGSVAEGKKFALLSREGSLVINNLLLTTILALVLLGTLYPIVAEAMGEKISVGPPYYNKVAGPLALIL
CLVMVAGPLLSWRKDDGKRLWSRLPVAIFAGAAILFALILFGGKVGILPLLGMTVAGIVAVASLAPLWGRNLRRVPLPTW
GMVVAHFGVGVCLAGMGAESAFIKERLVAAAPGETIRIADFSVKFVGVKPLAGPNYTAIEGALVATTPSGSSFTMKPEAR
TFPGLMGTAPTETNEAALLTRPGGQLYAVLGQPVTGEDGRADRYQIRLWWKPLVWWIWLGGGLIALGATLSLLGRAQLLA
MWRARRHRKSQERFAP

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG1138

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

Organism=Escherichia coli, GI1788524, Length=661, Percent_Identity=40.8472012102874, Blast_Score=434, Evalue=1e-123,
Organism=Escherichia coli, GI1790511, Length=579, Percent_Identity=35.405872193437, Blast_Score=269, Evalue=3e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003567
- InterPro:   IPR003568 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 69970; Mature: 69970

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAELGLALLWIAAALACLSLVAGTLFLRGGPGDLAALVRPASVAQGVLTTAAFGLLIAL
CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH
FVRSDMSVELVARNSNSLKPMIFKIAGTWGNHEGSMLLWLMILSLSGALIALFEKRLRED
HHHCCCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TLIATLAAQAALSLGFFAFLLFSSNPFKRLPVAPPDGQGLNPLLQDIGLAFHPPTLYVGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCEECCCHHHHHH
VGLSVAFSFAVGALITREIGPAFARAMRPWVLGSWIFLTLGITAGSYWAYYELGWGGWWF
HHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEE
WDPVENVSLVPWLAGAALLHSVAVTATRNALRAWTVMLAVIGFSMSMVGTFIVRSGLLTS
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHSFAVDPERGTFLLVLMAIYIGGALTLFALRAGSVAEGKKFALLSREGSLVINNLLLTT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHH
ILALVLLGTLYPIVAEAMGEKISVGPPYYNKVAGPLALILCLVMVAGPLLSWRKDDGKRL
HHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHH
WSRLPVAIFAGAAILFALILFGGKVGILPLLGMTVAGIVAVASLAPLWGRNLRRVPLPTW
HHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
GMVVAHFGVGVCLAGMGAESAFIKERLVAAAPGETIRIADFSVKFVGVKPLAGPNYTAIE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCEEEC
GALVATTPSGSSFTMKPEARTFPGLMGTAPTETNEAALLTRPGGQLYAVLGQPVTGEDGR
CEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCC
ADRYQIRLWWKPLVWWIWLGGGLIALGATLSLLGRAQLLAMWRARRHRKSQERFAP
CCEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
>Mature Secondary Structure
MIAELGLALLWIAAALACLSLVAGTLFLRGGPGDLAALVRPASVAQGVLTTAAFGLLIAL
CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH
FVRSDMSVELVARNSNSLKPMIFKIAGTWGNHEGSMLLWLMILSLSGALIALFEKRLRED
HHHCCCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TLIATLAAQAALSLGFFAFLLFSSNPFKRLPVAPPDGQGLNPLLQDIGLAFHPPTLYVGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCEECCCHHHHHH
VGLSVAFSFAVGALITREIGPAFARAMRPWVLGSWIFLTLGITAGSYWAYYELGWGGWWF
HHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEE
WDPVENVSLVPWLAGAALLHSVAVTATRNALRAWTVMLAVIGFSMSMVGTFIVRSGLLTS
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHSFAVDPERGTFLLVLMAIYIGGALTLFALRAGSVAEGKKFALLSREGSLVINNLLLTT
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHH
ILALVLLGTLYPIVAEAMGEKISVGPPYYNKVAGPLALILCLVMVAGPLLSWRKDDGKRL
HHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHH
WSRLPVAIFAGAAILFALILFGGKVGILPLLGMTVAGIVAVASLAPLWGRNLRRVPLPTW
HHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
GMVVAHFGVGVCLAGMGAESAFIKERLVAAAPGETIRIADFSVKFVGVKPLAGPNYTAIE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCEEEC
GALVATTPSGSSFTMKPEARTFPGLMGTAPTETNEAALLTRPGGQLYAVLGQPVTGEDGR
CEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCC
ADRYQIRLWWKPLVWWIWLGGGLIALGATLSLLGRAQLLAMWRARRHRKSQERFAP
CCEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7715602; 11481430 [H]