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The map label for this gene is cyoA [H]

Identifier: 103486993

GI number: 103486993

Start: 1570980

End: 1572209

Strand: Reverse

Name: cyoA [H]

Synonym: Sala_1508

Alternate gene names: 103486993

Gene position: 1572209-1570980 (Counterclockwise)

Preceding gene: 103486996

Following gene: 103486992

Centisome position: 47.0

GC content: 66.5

Gene sequence:

>1230_bases
TTGCGCAAGGCTTCGAGCCCCCACCCCAACCCCTCCCCTGAAGGGGAGGGGCTTGCATTCTCTTCGGCATTGAAGATTCG
CTGGCGCTTCGTGCCGCTGCTCGCCGCGCTGCCGCTCCTGTCGGGGTGCGGCATGGTCGTGCTCGATCCCGCCGGCGATG
TCGCGCGCCAGCAAGGCGACCTGATCGTCCTGTCGACGGTGCTGATGCTGCTGATCATCGTGCCGGTGATGGCGCTGACG
ATCTTTTTCGCATGGAAGTATCGCGCGTCGAACCGGGATGCGACCTACAAGCCCGACTGGGACCATTCGACGCAGCTCGA
ACTCGTCATCTGGTCGGCGCCGCTGCTCATCATCATCTGCCTCGGCGCGGTGACATGGGTGGCGACGCATCTGCTCGACC
CCTATCGCCCGCTGGCGCGGACGGGGCCGGGCAAGCCCGTCGCGGCCGAGGTCAAGCCGCTCGATGTCCAGGTCGTCGCG
CTCGACTGGAAATGGCTGTTCATCTATCCCGAACAGGGGGTGGCGACGGTCAACGAACTGGCGGTGCCGGTCGATCGGCC
GCTGCGGTTCCGCATCTCCTCCTCCTCGGTCATGAACAGCTTTTACGTGCCCGCGCTCGCGGGTCAGATTTACGCGATGC
CGGGGATGGAGACCAAGCTTCACGGCGTGTTCGACAAGACCGGCGAGTATACGGGCTTTTCGGCCAATTATTCGGGCTGG
GGCTTTTCCAACATGCGCTTCCGCGTCAAGAGCCTGCCCGCGGGCGAGTTCGACCAATGGGTCGCCGCGACGCGCGCGTC
GGCCGAAGGCGACCTCAGCCGCAACGCCTATCTGAAGCTCGAAACGCCGTCGCAGAAGGAACCGGTGCGCCGCTTCGTCG
CGAGCGACCCGCAGCTGTTCGACGCAGTGGTCAACATGTGCGTCGAGCCCGGCAAGATGTGCATGCACGACATGATGTCG
CTCGATGCCGCGGGCGGCGCGGGGATTGCGGGCATCGGCAATGTCCGGCAGGTCACCTATGACAAGTTCGCCGCGCGCGG
CACCGTCGATGCCGCCCGCTGGTCGATGCGCTATGTCGCCGCCTGGTGCAGCGCGCCGGTGATGTCGAACGATCGCCCCG
ACGCCAAACCCGTGTCGCCCGAGAAGCTGAAGGGCGAGGGGCTGCCGTTGCCGGGCAAGACCGCCCGCACCGCGCTGAAC
GCGCCCGCCGCTACGCGCCCGCTGTCCTGA

Upstream 100 bases:

>100_bases
GGAGGCTTAGGCGCGCGTCATGCCGAGTTATCGCCCACTCTTATCGTCGTATAAAGCCCCTCCCCTTCAGGGGAGGGGTT
GGGGGTGGGGGCCATCGGCC

Downstream 100 bases:

>100_bases
CCGTCTGCCGAGCTGAAACCCATGTCCGACGCCATCATCCCGCATCCCGCGCCCCCGACGCACCCGATCTTCGGCAAGCT
GTCGGTCGACGCGATCCCGC

Product: ubiquinol oxidase, subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MRKASSPHPNPSPEGEGLAFSSALKIRWRFVPLLAALPLLSGCGMVVLDPAGDVARQQGDLIVLSTVLMLLIIVPVMALT
IFFAWKYRASNRDATYKPDWDHSTQLELVIWSAPLLIIICLGAVTWVATHLLDPYRPLARTGPGKPVAAEVKPLDVQVVA
LDWKWLFIYPEQGVATVNELAVPVDRPLRFRISSSSVMNSFYVPALAGQIYAMPGMETKLHGVFDKTGEYTGFSANYSGW
GFSNMRFRVKSLPAGEFDQWVAATRASAEGDLSRNAYLKLETPSQKEPVRRFVASDPQLFDAVVNMCVEPGKMCMHDMMS
LDAAGGAGIAGIGNVRQVTYDKFAARGTVDAARWSMRYVAAWCSAPVMSNDRPDAKPVSPEKLKGEGLPLPGKTARTALN
APAATRPLS

Sequences:

>Translated_409_residues
MRKASSPHPNPSPEGEGLAFSSALKIRWRFVPLLAALPLLSGCGMVVLDPAGDVARQQGDLIVLSTVLMLLIIVPVMALT
IFFAWKYRASNRDATYKPDWDHSTQLELVIWSAPLLIIICLGAVTWVATHLLDPYRPLARTGPGKPVAAEVKPLDVQVVA
LDWKWLFIYPEQGVATVNELAVPVDRPLRFRISSSSVMNSFYVPALAGQIYAMPGMETKLHGVFDKTGEYTGFSANYSGW
GFSNMRFRVKSLPAGEFDQWVAATRASAEGDLSRNAYLKLETPSQKEPVRRFVASDPQLFDAVVNMCVEPGKMCMHDMMS
LDAAGGAGIAGIGNVRQVTYDKFAARGTVDAARWSMRYVAAWCSAPVMSNDRPDAKPVSPEKLKGEGLPLPGKTARTALN
APAATRPLS
>Mature_409_residues
MRKASSPHPNPSPEGEGLAFSSALKIRWRFVPLLAALPLLSGCGMVVLDPAGDVARQQGDLIVLSTVLMLLIIVPVMALT
IFFAWKYRASNRDATYKPDWDHSTQLELVIWSAPLLIIICLGAVTWVATHLLDPYRPLARTGPGKPVAAEVKPLDVQVVA
LDWKWLFIYPEQGVATVNELAVPVDRPLRFRISSSSVMNSFYVPALAGQIYAMPGMETKLHGVFDKTGEYTGFSANYSGW
GFSNMRFRVKSLPAGEFDQWVAATRASAEGDLSRNAYLKLETPSQKEPVRRFVASDPQLFDAVVNMCVEPGKMCMHDMMS
LDAAGGAGIAGIGNVRQVTYDKFAARGTVDAARWSMRYVAAWCSAPVMSNDRPDAKPVSPEKLKGEGLPLPGKTARTALN
APAATRPLS

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=284, Percent_Identity=45.7746478873239, Blast_Score=275, Evalue=3e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 44551; Mature: 44551

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKASSPHPNPSPEGEGLAFSSALKIRWRFVPLLAALPLLSGCGMVVLDPAGDVARQQGD
CCCCCCCCCCCCCCCCCEEEEHHEEEEHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCC
LIVLSTVLMLLIIVPVMALTIFFAWKYRASNRDATYKPDWDHSTQLELVIWSAPLLIIIC
EEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEECHHHHHHHH
LGAVTWVATHLLDPYRPLARTGPGKPVAAEVKPLDVQVVALDWKWLFIYPEQGVATVNEL
HHHHHHHHHHHCCCCCHHHHCCCCCCEEECCCCCEEEEEEEEEEEEEEECCCCCCCHHHH
AVPVDRPLRFRISSSSVMNSFYVPALAGQIYAMPGMETKLHGVFDKTGEYTGFSANYSGW
CCCCCCCEEEEECCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCC
GFSNMRFRVKSLPAGEFDQWVAATRASAEGDLSRNAYLKLETPSQKEPVRRFVASDPQLF
CCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHH
DAVVNMCVEPGKMCMHDMMSLDAAGGAGIAGIGNVRQVTYDKFAARGTVDAARWSMRYVA
HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
AWCSAPVMSNDRPDAKPVSPEKLKGEGLPLPGKTARTALNAPAATRPLS
HHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRKASSPHPNPSPEGEGLAFSSALKIRWRFVPLLAALPLLSGCGMVVLDPAGDVARQQGD
CCCCCCCCCCCCCCCCCEEEEHHEEEEHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCC
LIVLSTVLMLLIIVPVMALTIFFAWKYRASNRDATYKPDWDHSTQLELVIWSAPLLIIIC
EEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEECHHHHHHHH
LGAVTWVATHLLDPYRPLARTGPGKPVAAEVKPLDVQVVALDWKWLFIYPEQGVATVNEL
HHHHHHHHHHHCCCCCHHHHCCCCCCEEECCCCCEEEEEEEEEEEEEEECCCCCCCHHHH
AVPVDRPLRFRISSSSVMNSFYVPALAGQIYAMPGMETKLHGVFDKTGEYTGFSANYSGW
CCCCCCCEEEEECCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCC
GFSNMRFRVKSLPAGEFDQWVAATRASAEGDLSRNAYLKLETPSQKEPVRRFVASDPQLF
CCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHH
DAVVNMCVEPGKMCMHDMMSLDAAGGAGIAGIGNVRQVTYDKFAARGTVDAARWSMRYVA
HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
AWCSAPVMSNDRPDAKPVSPEKLKGEGLPLPGKTARTALNAPAATRPLS
HHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]