| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is aroA
Identifier: 103486978
GI number: 103486978
Start: 1555610
End: 1556950
Strand: Direct
Name: aroA
Synonym: Sala_1493
Alternate gene names: 103486978
Gene position: 1555610-1556950 (Clockwise)
Preceding gene: 103486976
Following gene: 103486979
Centisome position: 46.5
GC content: 67.93
Gene sequence:
>1341_bases ATGACCGACCAAACCGCCACACCGCGCAGCTTTTCTGCCTCCGTTCCGTTGAAGGGCAGGATCGCCATTCCGGGCGACAA GAGCATCTCGCACCGATCGCTGATGCTGTCGGCGCTGGCCGTCGGCGAAAGCCGCGTCGCCGGCCTGCTCGAAGGGCATG ATGTCCTCGCGACCGCCGCCGCGATGCGCGCCATGGGGGCCGATATCGCGCGCCGCGACGACGGCGAATGGCGCATCCAC GGCGTCGGCGTCGGCGGCTTGCTCCAGCCGCGGGGCGCGCTCGACATGGGGAACAGCGGCACGTCGACACGTCTGCTGAT GGGGCTCGTCGCGAGCCACCCGATCACCGCCACTTTCGTCGGCGACGCCAGCCTGTCGGGTCGCCCGATGGGGCGCGTCA TCGATCCGCTGACCCAGATGGGCGCCGACATCAGCGCCTCGCCGGGCGCCAGGGGGGCAAAAACTCTGCCGCTGATGGTC CGCGGCCTCGCGCCCGCCATTCCCCTCTCCTACCGCCTGCCGATGGCGTCGGCGCAGGTGAAGAGCGCGATCCTTCTCGC CGGACTCAATACGCCCGGCGTCACCGAAGTCATCGAGCCGGTGCCCACGCGCGACCACAGCGAGCGGATGCTCGGCGCCT TTGGCGCCGATCTGACCGTCGACATCGACGCGGGCGGCACGCGCCATATCCGTATCCGCGGCGAAGCCGATCTCAAGCCG CAGGCGATCATCGTCCCCGGTGATCCCTCCTCGGCCGCCTTCTTTATCGTTGCGGCGCTCATCGTGCCCGGTTCGGACGT CACCATCGCCAACGTCGGTCTCAATCCGACGCGCGCCGGGCTGGTCGAGGTTCTGAAGGCGATGGGCGGCGACATCGAAC TGCTCGACCGGCGCGAAATCGGCGGCGAACCCGTCGCCGACCTGCGCGTGCGCCACAGCGTGCTCAAAGGCATCGAGGTC GACCCGGCGGTTGCGCCGAGCATGATCGATGAGTTTCCAGTCCTCTTCGTTGCCGCGACGCTCGCCGAAGGCCGCACGGT GACCACGGGGCTCGATGAACTGCGCGTCAAGGAAAGCGACCGCCTTGCCGTCATGGCGACCGGGCTCAAGGCCATCGGCG CGCGTGTCGAGGAAAGCCAAGACGGCCTTGTCATTGATGGCACCGGCGGCGATCCGCTAGCCGGCGGCGCGACCATCGCC GGCCATCTCGATCATCGCATCTGCATGAGCTTCGCAATCGCGGGGCTTGTCAGCAAGGCGCCGGTGACGGTCGACGACAT CGCCCCCGTCGCAACGAGCTTCCCCAATTTCGAGGCATTGCTTGCGGGTTTGCAACAATGA
Upstream 100 bases:
>100_bases AGGATAAAAATATCGGAAGAACGACGACGCCTGAATAGCTATCCGTCAAATCGGCGTGCGCCTTGCCAGATTGCAAGGCC GCTGTCAAAAGCCGCACGCG
Downstream 100 bases:
>100_bases TCATCGCCATCGATGGCCCCACCGCATCGGGCAAGGGCACGCTTGCTCGCCAGCTCGCAGACCATTTCGGCCTGCCGGTA CTCGACACCGGCCTCCTGTA
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTDQTATPRSFSASVPLKGRIAIPGDKSISHRSLMLSALAVGESRVAGLLEGHDVLATAAAMRAMGADIARRDDGEWRIH GVGVGGLLQPRGALDMGNSGTSTRLLMGLVASHPITATFVGDASLSGRPMGRVIDPLTQMGADISASPGARGAKTLPLMV RGLAPAIPLSYRLPMASAQVKSAILLAGLNTPGVTEVIEPVPTRDHSERMLGAFGADLTVDIDAGGTRHIRIRGEADLKP QAIIVPGDPSSAAFFIVAALIVPGSDVTIANVGLNPTRAGLVEVLKAMGGDIELLDRREIGGEPVADLRVRHSVLKGIEV DPAVAPSMIDEFPVLFVAATLAEGRTVTTGLDELRVKESDRLAVMATGLKAIGARVEESQDGLVIDGTGGDPLAGGATIA GHLDHRICMSFAIAGLVSKAPVTVDDIAPVATSFPNFEALLAGLQQ
Sequences:
>Translated_446_residues MTDQTATPRSFSASVPLKGRIAIPGDKSISHRSLMLSALAVGESRVAGLLEGHDVLATAAAMRAMGADIARRDDGEWRIH GVGVGGLLQPRGALDMGNSGTSTRLLMGLVASHPITATFVGDASLSGRPMGRVIDPLTQMGADISASPGARGAKTLPLMV RGLAPAIPLSYRLPMASAQVKSAILLAGLNTPGVTEVIEPVPTRDHSERMLGAFGADLTVDIDAGGTRHIRIRGEADLKP QAIIVPGDPSSAAFFIVAALIVPGSDVTIANVGLNPTRAGLVEVLKAMGGDIELLDRREIGGEPVADLRVRHSVLKGIEV DPAVAPSMIDEFPVLFVAATLAEGRTVTTGLDELRVKESDRLAVMATGLKAIGARVEESQDGLVIDGTGGDPLAGGATIA GHLDHRICMSFAIAGLVSKAPVTVDDIAPVATSFPNFEALLAGLQQ >Mature_445_residues TDQTATPRSFSASVPLKGRIAIPGDKSISHRSLMLSALAVGESRVAGLLEGHDVLATAAAMRAMGADIARRDDGEWRIHG VGVGGLLQPRGALDMGNSGTSTRLLMGLVASHPITATFVGDASLSGRPMGRVIDPLTQMGADISASPGARGAKTLPLMVR GLAPAIPLSYRLPMASAQVKSAILLAGLNTPGVTEVIEPVPTRDHSERMLGAFGADLTVDIDAGGTRHIRIRGEADLKPQ AIIVPGDPSSAAFFIVAALIVPGSDVTIANVGLNPTRAGLVEVLKAMGGDIELLDRREIGGEPVADLRVRHSVLKGIEVD PAVAPSMIDEFPVLFVAATLAEGRTVTTGLDELRVKESDRLAVMATGLKAIGARVEESQDGLVIDGTGGDPLAGGATIAG HLDHRICMSFAIAGLVSKAPVTVDDIAPVATSFPNFEALLAGLQQ
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=440, Percent_Identity=30.2272727272727, Blast_Score=126, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6320332, Length=430, Percent_Identity=27.2093023255814, Blast_Score=108, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_SPHAL (Q1GT16)
Other databases:
- EMBL: CP000356 - RefSeq: YP_616539.1 - ProteinModelPortal: Q1GT16 - SMR: Q1GT16 - GeneID: 4081170 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_1493 - NMPDR: fig|317655.9.peg.1426 - HOGENOM: HBG646626 - OMA: LSRNHTE - ProtClustDB: PRK02427 - BioCyc: SALA317655:SALA_1493-MONOMER - BRENDA: 2.5.1.19 - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 45958; Mature: 45826
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQTATPRSFSASVPLKGRIAIPGDKSISHRSLMLSALAVGESRVAGLLEGHDVLATAA CCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCHHHHHHH AMRAMGADIARRDDGEWRIHGVGVGGLLQPRGALDMGNSGTSTRLLMGLVASHPITATFV HHHHHCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE GDASLSGRPMGRVIDPLTQMGADISASPGARGAKTLPLMVRGLAPAIPLSYRLPMASAQV CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCHHHH KSAILLAGLNTPGVTEVIEPVPTRDHSERMLGAFGADLTVDIDAGGTRHIRIRGEADLKP HCEEEEEECCCCCHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCC QAIIVPGDPSSAAFFIVAALIVPGSDVTIANVGLNPTRAGLVEVLKAMGGDIELLDRREI CEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEHHHC GGEPVADLRVRHSVLKGIEVDPAVAPSMIDEFPVLFVAATLAEGRTVTTGLDELRVKESD CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCCCC RLAVMATGLKAIGARVEESQDGLVIDGTGGDPLAGGATIAGHLDHRICMSFAIAGLVSKA CEEEEECCHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCC PVTVDDIAPVATSFPNFEALLAGLQQ CCCHHHCCHHHHCCCCHHHHHHHHCC >Mature Secondary Structure TDQTATPRSFSASVPLKGRIAIPGDKSISHRSLMLSALAVGESRVAGLLEGHDVLATAA CCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCHHHHHHH AMRAMGADIARRDDGEWRIHGVGVGGLLQPRGALDMGNSGTSTRLLMGLVASHPITATFV HHHHHCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE GDASLSGRPMGRVIDPLTQMGADISASPGARGAKTLPLMVRGLAPAIPLSYRLPMASAQV CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCHHHH KSAILLAGLNTPGVTEVIEPVPTRDHSERMLGAFGADLTVDIDAGGTRHIRIRGEADLKP HCEEEEEECCCCCHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCC QAIIVPGDPSSAAFFIVAALIVPGSDVTIANVGLNPTRAGLVEVLKAMGGDIELLDRREI CEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEHHHC GGEPVADLRVRHSVLKGIEVDPAVAPSMIDEFPVLFVAATLAEGRTVTTGLDELRVKESD CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCCCC RLAVMATGLKAIGARVEESQDGLVIDGTGGDPLAGGATIAGHLDHRICMSFAIAGLVSKA CEEEEECCHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCC PVTVDDIAPVATSFPNFEALLAGLQQ CCCHHHCCHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA