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The map label for this gene is ycfQ [C]

Identifier: 103486932

GI number: 103486932

Start: 1494518

End: 1495162

Strand: Reverse

Name: ycfQ [C]

Synonym: Sala_1447

Alternate gene names: 103486932

Gene position: 1495162-1494518 (Counterclockwise)

Preceding gene: 103486937

Following gene: 103486931

Centisome position: 44.7

GC content: 60.78

Gene sequence:

>645_bases
TTGACCGGGTCGGAAACGACTTTTTCTCAAAGAGATACAGAGTCGCCGCGCGAGCGGCGCTATAATGCGATTCTCGACGC
GGCCGAAGCCTTGTTTCTCGAACATGGCTATGAACGCACCAGCCTCGCCGACATCGTCCGGCGTTCGGGTGGTTCGCTGG
CGACGCTTTATGACCTTTTCGGGAACAAGCAGGGCCTGCTACGCGCAATAGCGACGCGATGGTCGGACGAAACGGCCTTC
TGCCCGCTCGATCCGGCCGTGACCGCGACCATGTCGCACGTCGACACCCTCAAAAGCTATGCCTTCCGCCAAAGCGACGC
GATGCAGTCGCCGCGCGCGATCGCGCTGATGCGGATGCTGGTGTCCGAAAGTGTGCGCGACCGTGATTTTGCGGCCGGCA
TCTATCGCGATATCCACTTGCCCGCGATCGCCGAGTTGACCGAACTCTTCACCCGCTGGGCGGCGGCGGGCGAGGCCGAC
ATCGACGATCCCCAAGCCGCGGCGAAATTATTCCTCAACATCGTCTTCGGCGATTCGATGCTCAACGCGCTGGCGGGGAT
CGAGGAGGAATCGCTGGGAAGGGAAGAGATCGACTGGCGCCTTCGACCGTTCATATCGCATTTCAGGATCGGCCAGATTC
ATTGA

Upstream 100 bases:

>100_bases
AAATCGCAGTTGTGCGGGATGTTTTTATAGGCGAAAGCGTGCGCCGACAGTTCTCTGTAATTTAAGTTACAAACGTCGAC
AAGGGACGAGGAATGAAAAA

Downstream 100 bases:

>100_bases
CATAATTGTCAATAGCTGAAAGCATCGCGCTTCGTGCCTTCCTGGGGAGCGACGCGACGTGGCCAGTTCCGCCCTGCCAT
CGGCTATATCCGCGCCTCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcription Regulator Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR Family Regulatory

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTGSETTFSQRDTESPRERRYNAILDAAEALFLEHGYERTSLADIVRRSGGSLATLYDLFGNKQGLLRAIATRWSDETAF
CPLDPAVTATMSHVDTLKSYAFRQSDAMQSPRAIALMRMLVSESVRDRDFAAGIYRDIHLPAIAELTELFTRWAAAGEAD
IDDPQAAAKLFLNIVFGDSMLNALAGIEEESLGREEIDWRLRPFISHFRIGQIH

Sequences:

>Translated_214_residues
MTGSETTFSQRDTESPRERRYNAILDAAEALFLEHGYERTSLADIVRRSGGSLATLYDLFGNKQGLLRAIATRWSDETAF
CPLDPAVTATMSHVDTLKSYAFRQSDAMQSPRAIALMRMLVSESVRDRDFAAGIYRDIHLPAIAELTELFTRWAAAGEAD
IDDPQAAAKLFLNIVFGDSMLNALAGIEEESLGREEIDWRLRPFISHFRIGQIH
>Mature_213_residues
TGSETTFSQRDTESPRERRYNAILDAAEALFLEHGYERTSLADIVRRSGGSLATLYDLFGNKQGLLRAIATRWSDETAFC
PLDPAVTATMSHVDTLKSYAFRQSDAMQSPRAIALMRMLVSESVRDRDFAAGIYRDIHLPAIAELTELFTRWAAAGEADI
DDPQAAAKLFLNIVFGDSMLNALAGIEEESLGREEIDWRLRPFISHFRIGQIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081833, Length=79, Percent_Identity=41.7721518987342, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23959; Mature: 23828

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSETTFSQRDTESPRERRYNAILDAAEALFLEHGYERTSLADIVRRSGGSLATLYDLF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH
GNKQGLLRAIATRWSDETAFCPLDPAVTATMSHVDTLKSYAFRQSDAMQSPRAIALMRML
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VSESVRDRDFAAGIYRDIHLPAIAELTELFTRWAAAGEADIDDPQAAAKLFLNIVFGDSM
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LNALAGIEEESLGREEIDWRLRPFISHFRIGQIH
HHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TGSETTFSQRDTESPRERRYNAILDAAEALFLEHGYERTSLADIVRRSGGSLATLYDLF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH
GNKQGLLRAIATRWSDETAFCPLDPAVTATMSHVDTLKSYAFRQSDAMQSPRAIALMRML
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VSESVRDRDFAAGIYRDIHLPAIAELTELFTRWAAAGEADIDDPQAAAKLFLNIVFGDSM
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LNALAGIEEESLGREEIDWRLRPFISHFRIGQIH
HHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA