| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is aroQ [H]
Identifier: 103486922
GI number: 103486922
Start: 1485902
End: 1486342
Strand: Direct
Name: aroQ [H]
Synonym: Sala_1437
Alternate gene names: 103486922
Gene position: 1485902-1486342 (Clockwise)
Preceding gene: 103486921
Following gene: 103486923
Centisome position: 44.42
GC content: 65.53
Gene sequence:
>441_bases TTGCCCGACCTTCCCACCGTCTTTGTCCTCTCCGGCCCGAACCTCAACCTGCTCGGCACGCGCGAGCCGGAAATCTATGG CACCGACACGCTCAACGACATTCACGCCCGGCTCGAGGCGCAGGCGGCCGACCTCGGCCTCCGCGTCGAATGCCGCCAGA CCAACCATGAAGGGGTGCTGATCGACTGGCTGCATGAAGCCTATGTGTCGGGCGCCAAGGCGGTGCTGCTCAACGCCGGC GGCTACACGCACACCTCGATCGCGATCCACGATGCGATCCGGTCGATCAAGGTGCCGGTGATCGAGGTCCATCTGTCGGA CCCGGCAAAGCGTGAGGCGTTTCGCCATGTCAGCTATGTCGGCATGGCCGCCGTCGCCCATTTTGCCGGACACGGCGCGA ACAGCTATACGCTGGCGCTGGACGCCGCCGCCCGTCTCTGA
Upstream 100 bases:
>100_bases GTTGAGGATGACCGAAATCACGTAGAAGCGCCTCGCTTTGCCTTTTGCCGAGCAGCCCATATAGGGGGAGCCTGCATCGT CGCAACCGAAAGCCAAGCCT
Downstream 100 bases:
>100_bases CAATAGGGCGCATCAAAAACGGGGTCAGGCGCCTCGATGACGGCGCCGCAACAACAGGAACATTCTCATGGGTGACCATA AAGACCATGGCATCAACATC
Product: 3-dehydroquinate dehydratase
Products: NA
Alternate protein names: 3-dehydroquinase; Type II DHQase [H]
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPDLPTVFVLSGPNLNLLGTREPEIYGTDTLNDIHARLEAQAADLGLRVECRQTNHEGVLIDWLHEAYVSGAKAVLLNAG GYTHTSIAIHDAIRSIKVPVIEVHLSDPAKREAFRHVSYVGMAAVAHFAGHGANSYTLALDAAARL
Sequences:
>Translated_146_residues MPDLPTVFVLSGPNLNLLGTREPEIYGTDTLNDIHARLEAQAADLGLRVECRQTNHEGVLIDWLHEAYVSGAKAVLLNAG GYTHTSIAIHDAIRSIKVPVIEVHLSDPAKREAFRHVSYVGMAAVAHFAGHGANSYTLALDAAARL >Mature_145_residues PDLPTVFVLSGPNLNLLGTREPEIYGTDTLNDIHARLEAQAADLGLRVECRQTNHEGVLIDWLHEAYVSGAKAVLLNAGG YTHTSIAIHDAIRSIKVPVIEVHLSDPAKREAFRHVSYVGMAAVAHFAGHGANSYTLALDAAARL
Specific function: Catalyzes a trans-dehydration via an enolate intermediate [H]
COG id: COG0757
COG function: function code E; 3-dehydroquinate dehydratase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-II 3-dehydroquinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001874 - ProDom: PD004527 [H]
Pfam domain/function: PF01220 DHquinase_II [H]
EC number: =4.2.1.10 [H]
Molecular weight: Translated: 15730; Mature: 15599
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS01029 DEHYDROQUINASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLPTVFVLSGPNLNLLGTREPEIYGTDTLNDIHARLEAQAADLGLRVECRQTNHEGVL CCCCCEEEEEECCCEEEEECCCCCEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEE IDWLHEAYVSGAKAVLLNAGGYTHTSIAIHDAIRSIKVPVIEVHLSDPAKREAFRHVSYV EHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHH GMAAVAHFAGHGANSYTLALDAAARL HHHHHHHHHCCCCCCEEEEEECCCCC >Mature Secondary Structure PDLPTVFVLSGPNLNLLGTREPEIYGTDTLNDIHARLEAQAADLGLRVECRQTNHEGVL CCCCEEEEEECCCEEEEECCCCCEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEE IDWLHEAYVSGAKAVLLNAGGYTHTSIAIHDAIRSIKVPVIEVHLSDPAKREAFRHVSYV EHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHH GMAAVAHFAGHGANSYTLALDAAARL HHHHHHHHHCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA