Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486921

Identifier: 103486921

GI number: 103486921

Start: 1483112

End: 1484839

Strand: Direct

Name: 103486921

Synonym: Sala_1435

Alternate gene names: NA

Gene position: 1483112-1484839 (Clockwise)

Preceding gene: 103486919

Following gene: 103486922

Centisome position: 44.34

GC content: 63.02

Gene sequence:

>1728_bases
ATGGGCGCCGGTTCGGGCATGTTCGGCTTCTGGGCATCGCAAACACAGTTCGTCTCTTGGCACTTTCGGGGGGGTTCGGC
GATGCGCAGATTTATTCCAGCAGCCATGATCCTGCCGCTCGCGGCCTGTACCCATGTCGCGACCTTTCGCACGCAGGACA
TCGCCCCGCCCGCCGAGGGCGAGGCGCTGAAGGGCGCATCCTATGCCCTTCCGATGGTCCAGTTCGATCTGGAGATCGCC
CGATCGCTCTCCTCGTGCGACACCGCCGCCACGCCGCTGTTCGCGGTTCAGGCGACCGCAAAGGAATCCTATGTCGAAGG
CGAAAGGTTCGAGATTGATCCCTCGGCGCTCAGTTCGCTTTTCAAGACATCCTCGCTCGCGATTGAAAAATATGAGGATC
TCGACACGCTCAAATCCTTCAACGCCGGCGCCGACGACCGAACCGGCGATATTCTGGTGGCAGTCGCGCGGACCGGTATT
GCGATTGCCGGGGCGACCGCTGGCATCCCCGTGCCGCTGGATGCGGTCGGCGAATCCTCGCCGTGGAAAAACGTGCTTGA
ACGCGCACAGTCGATCCGCCTGTGGTGTTCGGCGGAGGCGCAGAAACGCCTGGCGACAGTCGAGATGGAGACCGGCAATC
TGGAGCGATTGAACGCCCGGCTCGAAGCCGTGAACGCGCATGTCGTCCGGTTGAAAGAACTTGCGGCGTTTCGCCGGTTC
GACAAGGCGATGATGGACAGTCTGTATCAGGAGGTTCAAAAACAGCAGCAACTCGCCACCGAGATCGCGACCACAAAGGC
CGCGCTGGCCGATGCGACCGGTGCGCTGGGCGCAAAGACCGAGCTTCGCTGGCCCACTGCCTCGTCGGCGACGCCGCGCG
CGGACGATCTCCGGCACCAGGTCCGCTTTTGGGATTCGGCGCGCAAGCTGCGAAAGTTCTGCTCCAATTTTCAGCTCGTC
GCCTGGAACGGCGTCAGCGGCGTACCGCTCGATCCTGCGAGCCTCGTCGGCAACGAGACGGCGCTCGACGCCCACTGCGA
GGGGGTGATTGCGGTGCTCCGGCAATCGATCGACGTCCGGTTGCGGTTCGAACCCGTCACCCAGACGCGCTGGGCCACCG
GCGGCAATGTCGATTTGGCATATAAGCTGCCGTCCGATGCGCCCGCCAAAGGCCTTTTGGTTCGCGAGCCGATTCGCGCC
AGCCTTGTCGCCGAATACCGCCTTTCGGGGACTGCGGACTGGAAAACCGCGTTGAAGGACGAGCCCTTGTGGGTGCCGCA
ACTCGGCACGCTGCGCTTTTTGAAGTTTGCGAGCGGACCGTTCGAAAATGAACTGCTGTCGGTCGAATTGCGCAAGGACG
GCCGGATCGAAAAGCAGCGATATGAAACCAAGGAAGCCGCGCTCGCCCGGCTGGGAGCGAGCGCCGTGGACATCGCCGAA
CGTGTGCGCAGCGATGCCGAAAAGCGCGAAGAGCGGCGACGCGCGGACGAAAAATATCTTCGCGAAACCGCCGCGGCCGA
ACGCGCCGAGGAGCTGGCGCGGCTACAGTATCAACTCGACATGCTGACCAGGAAAAAGGCCCTGATCGAAGCATCGCGCG
ACGATTCGGCCGAACGGCTCGCGGCTGCCGAACTGGCGCAGATCAACGCGGACATTGCGATGCTGAAGGCGCAGATCGAC
CGGATCAAGCTGACGAACGAACTCGGCCTGCTGCAACCGCCGGGATGA

Upstream 100 bases:

>100_bases
CAACGCCCGCGTGGGGTCATCGTTCCGCCCGCGACGATCAAGCGGCGCCGCGTCGGGACAAGTCGCATTTCGTGCCAATG
TGGCGACGATACGGGTTGCA

Downstream 100 bases:

>100_bases
ACAGCGCCCCGGTCAGATGAGGCCTGCAAGCGGGCTCGACGGGTCGGCATAGCGGCGCTGCCCCATCCGGCCCGCCAGAT
AGGCGTCGCGCCCCGCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MGAGSGMFGFWASQTQFVSWHFRGGSAMRRFIPAAMILPLAACTHVATFRTQDIAPPAEGEALKGASYALPMVQFDLEIA
RSLSSCDTAATPLFAVQATAKESYVEGERFEIDPSALSSLFKTSSLAIEKYEDLDTLKSFNAGADDRTGDILVAVARTGI
AIAGATAGIPVPLDAVGESSPWKNVLERAQSIRLWCSAEAQKRLATVEMETGNLERLNARLEAVNAHVVRLKELAAFRRF
DKAMMDSLYQEVQKQQQLATEIATTKAALADATGALGAKTELRWPTASSATPRADDLRHQVRFWDSARKLRKFCSNFQLV
AWNGVSGVPLDPASLVGNETALDAHCEGVIAVLRQSIDVRLRFEPVTQTRWATGGNVDLAYKLPSDAPAKGLLVREPIRA
SLVAEYRLSGTADWKTALKDEPLWVPQLGTLRFLKFASGPFENELLSVELRKDGRIEKQRYETKEAALARLGASAVDIAE
RVRSDAEKREERRRADEKYLRETAAAERAEELARLQYQLDMLTRKKALIEASRDDSAERLAAAELAQINADIAMLKAQID
RIKLTNELGLLQPPG

Sequences:

>Translated_575_residues
MGAGSGMFGFWASQTQFVSWHFRGGSAMRRFIPAAMILPLAACTHVATFRTQDIAPPAEGEALKGASYALPMVQFDLEIA
RSLSSCDTAATPLFAVQATAKESYVEGERFEIDPSALSSLFKTSSLAIEKYEDLDTLKSFNAGADDRTGDILVAVARTGI
AIAGATAGIPVPLDAVGESSPWKNVLERAQSIRLWCSAEAQKRLATVEMETGNLERLNARLEAVNAHVVRLKELAAFRRF
DKAMMDSLYQEVQKQQQLATEIATTKAALADATGALGAKTELRWPTASSATPRADDLRHQVRFWDSARKLRKFCSNFQLV
AWNGVSGVPLDPASLVGNETALDAHCEGVIAVLRQSIDVRLRFEPVTQTRWATGGNVDLAYKLPSDAPAKGLLVREPIRA
SLVAEYRLSGTADWKTALKDEPLWVPQLGTLRFLKFASGPFENELLSVELRKDGRIEKQRYETKEAALARLGASAVDIAE
RVRSDAEKREERRRADEKYLRETAAAERAEELARLQYQLDMLTRKKALIEASRDDSAERLAAAELAQINADIAMLKAQID
RIKLTNELGLLQPPG
>Mature_574_residues
GAGSGMFGFWASQTQFVSWHFRGGSAMRRFIPAAMILPLAACTHVATFRTQDIAPPAEGEALKGASYALPMVQFDLEIAR
SLSSCDTAATPLFAVQATAKESYVEGERFEIDPSALSSLFKTSSLAIEKYEDLDTLKSFNAGADDRTGDILVAVARTGIA
IAGATAGIPVPLDAVGESSPWKNVLERAQSIRLWCSAEAQKRLATVEMETGNLERLNARLEAVNAHVVRLKELAAFRRFD
KAMMDSLYQEVQKQQQLATEIATTKAALADATGALGAKTELRWPTASSATPRADDLRHQVRFWDSARKLRKFCSNFQLVA
WNGVSGVPLDPASLVGNETALDAHCEGVIAVLRQSIDVRLRFEPVTQTRWATGGNVDLAYKLPSDAPAKGLLVREPIRAS
LVAEYRLSGTADWKTALKDEPLWVPQLGTLRFLKFASGPFENELLSVELRKDGRIEKQRYETKEAALARLGASAVDIAER
VRSDAEKREERRRADEKYLRETAAAERAEELARLQYQLDMLTRKKALIEASRDDSAERLAAAELAQINADIAMLKAQIDR
IKLTNELGLLQPPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63105; Mature: 62974

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGSGMFGFWASQTQFVSWHFRGGSAMRRFIPAAMILPLAACTHVATFRTQDIAPPAEG
CCCCCCCCEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
EALKGASYALPMVQFDLEIARSLSSCDTAATPLFAVQATAKESYVEGERFEIDPSALSSL
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCEEEEEEHHHHHHCCCCCEEECHHHHHHH
FKTSSLAIEKYEDLDTLKSFNAGADDRTGDILVAVARTGIAIAGATAGIPVPLDAVGESS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCHHHCCCCC
PWKNVLERAQSIRLWCSAEAQKRLATVEMETGNLERLNARLEAVNAHVVRLKELAAFRRF
CHHHHHHHHHHEEEEECHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKAMMDSLYQEVQKQQQLATEIATTKAALADATGALGAKTELRWPTASSATPRADDLRHQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHH
VRFWDSARKLRKFCSNFQLVAWNGVSGVPLDPASLVGNETALDAHCEGVIAVLRQSIDVR
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEE
LRFEPVTQTRWATGGNVDLAYKLPSDAPAKGLLVREPIRASLVAEYRLSGTADWKTALKD
EEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCHHHHHHHHHHCCCCCCHHHHCCC
EPLWVPQLGTLRFLKFASGPFENELLSVELRKDGRIEKQRYETKEAALARLGASAVDIAE
CCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
RVRSDAEKREERRRADEKYLRETAAAERAEELARLQYQLDMLTRKKALIEASRDDSAERL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AAAELAQINADIAMLKAQIDRIKLTNELGLLQPPG
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
>Mature Secondary Structure 
GAGSGMFGFWASQTQFVSWHFRGGSAMRRFIPAAMILPLAACTHVATFRTQDIAPPAEG
CCCCCCCEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
EALKGASYALPMVQFDLEIARSLSSCDTAATPLFAVQATAKESYVEGERFEIDPSALSSL
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCEEEEEEHHHHHHCCCCCEEECHHHHHHH
FKTSSLAIEKYEDLDTLKSFNAGADDRTGDILVAVARTGIAIAGATAGIPVPLDAVGESS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCHHHCCCCC
PWKNVLERAQSIRLWCSAEAQKRLATVEMETGNLERLNARLEAVNAHVVRLKELAAFRRF
CHHHHHHHHHHEEEEECHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKAMMDSLYQEVQKQQQLATEIATTKAALADATGALGAKTELRWPTASSATPRADDLRHQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHH
VRFWDSARKLRKFCSNFQLVAWNGVSGVPLDPASLVGNETALDAHCEGVIAVLRQSIDVR
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEE
LRFEPVTQTRWATGGNVDLAYKLPSDAPAKGLLVREPIRASLVAEYRLSGTADWKTALKD
EEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCHHHHHHHHHHCCCCCCHHHHCCC
EPLWVPQLGTLRFLKFASGPFENELLSVELRKDGRIEKQRYETKEAALARLGASAVDIAE
CCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
RVRSDAEKREERRRADEKYLRETAAAERAEELARLQYQLDMLTRKKALIEASRDDSAERL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AAAELAQINADIAMLKAQIDRIKLTNELGLLQPPG
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA