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The map label for this gene is perM [H]

Identifier: 103486897

GI number: 103486897

Start: 1463987

End: 1465096

Strand: Direct

Name: perM [H]

Synonym: Sala_1411

Alternate gene names: 103486897

Gene position: 1463987-1465096 (Clockwise)

Preceding gene: 103486896

Following gene: 103486899

Centisome position: 43.76

GC content: 66.67

Gene sequence:

>1110_bases
ATGGCGGAGACGAGGAAGGCAAGCGGGATACGCACCTCCGCCGCCTATGACGCGACGAGCGAGGCCCCCGGCCCGACCGA
AATCCGCAGCCAGATCGTCCGCGCCGAACTGCTAAAGGCGGGCGTATGGCTGGGCCTTGCGCTGGCTATCGGGCTGTGCA
TCATCCTGATCCAGCCGATCCTGCTGATCTTTGCCGCCATCGTGCTCGCCTCGATGCTCGATGGCGGGACGCGCCTGCTC
GGCCGGGTGCTGCCGGTCGCGCGCGGCTGGCGGCTGCTGATCATCTGCCTGGCCCTGCTCGCCTTCCTTGCCTGGACGAT
CCTGTTCGCGGGCTCACAAATCGTCGCCCAGGCCGCCGCGCTGCAAGGTGTCGTCATGGGGCAGGTCGAACGCATCGCCG
GCTGGGCAAGCGATCATGGCATGGGAAGCTTCCAGCTCGATACCAGGACGATCGCCGACAATATCGCGGGCACCGTCGGC
CGTGTTACCGCGGCGGTCGGCACCGTGCTCGGCGCGCTGACCAGCCTGGTGATGATCGTCGTCCTTGGCATCTTCATCGC
GATCGAACCGCGGCTTTACGAACGCGGGGTCGCGTGGATGCTGCCGATGAACGCACGCGAGAACTTCTATATCACCACTG
CACGCATGGGCTTCACGCTCCGCCGCCTGATGGCCGGGCGGCTGCTCGGCATGTTCGTCGAAGGCATCGGGACGTGGCTC
GCCTGTCTCGCCGTCGGCATTCCCATGGCGGCGCTGCTGGGGCTGCTCACCGGCCTGCTCGCCTTCATTCCCAACATCGG
CGCGATCCTGTCGGGCGTGCTGCTCGTCCTTGTCGGCTTCTCGGCAGGGACCGACACGGGGCTGTGGGCGATCGGCATCT
ATCTGGTCGTGCAGACGGTCGACGGCTATCTGATCGTGCCGATGGTCGCGAAGAAGACGGTCGATCTGGCGCCCGCGCTG
GTGCTGGGTGCGCAGATATTGTTCGGTGCGCTCCTCGGACTGATGGGCCTGTTCCTCGCCGATCCGATCGTCGCGATGAT
CAAGGTCGCGCTGGAGCGCGAGGCCGAGCGCAATGCGGGGGCGGCCGAAGGGAAAGCGGCGGCAAGCTGA

Upstream 100 bases:

>100_bases
GGTATAATCCGCTGAGCTGGTTCGAGGCGCTGCGGCCGGGGCGTGCGGGAACCGACCTGCGGCCCGTGCGTGCAGGCGAT
TAGCAAACGGGGAACAAGCC

Downstream 100 bases:

>100_bases
GGGCTCATCGCCCCCGCGGAGGCGGGGGCCGCTGGTATCCTTGCGCTATGCCGATAGCGGCCCCCGCCTTCGCGGGGGCG
ACGATTCTGTTAAGGCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MAETRKASGIRTSAAYDATSEAPGPTEIRSQIVRAELLKAGVWLGLALAIGLCIILIQPILLIFAAIVLASMLDGGTRLL
GRVLPVARGWRLLIICLALLAFLAWTILFAGSQIVAQAAALQGVVMGQVERIAGWASDHGMGSFQLDTRTIADNIAGTVG
RVTAAVGTVLGALTSLVMIVVLGIFIAIEPRLYERGVAWMLPMNARENFYITTARMGFTLRRLMAGRLLGMFVEGIGTWL
ACLAVGIPMAALLGLLTGLLAFIPNIGAILSGVLLVLVGFSAGTDTGLWAIGIYLVVQTVDGYLIVPMVAKKTVDLAPAL
VLGAQILFGALLGLMGLFLADPIVAMIKVALEREAERNAGAAEGKAAAS

Sequences:

>Translated_369_residues
MAETRKASGIRTSAAYDATSEAPGPTEIRSQIVRAELLKAGVWLGLALAIGLCIILIQPILLIFAAIVLASMLDGGTRLL
GRVLPVARGWRLLIICLALLAFLAWTILFAGSQIVAQAAALQGVVMGQVERIAGWASDHGMGSFQLDTRTIADNIAGTVG
RVTAAVGTVLGALTSLVMIVVLGIFIAIEPRLYERGVAWMLPMNARENFYITTARMGFTLRRLMAGRLLGMFVEGIGTWL
ACLAVGIPMAALLGLLTGLLAFIPNIGAILSGVLLVLVGFSAGTDTGLWAIGIYLVVQTVDGYLIVPMVAKKTVDLAPAL
VLGAQILFGALLGLMGLFLADPIVAMIKVALEREAERNAGAAEGKAAAS
>Mature_368_residues
AETRKASGIRTSAAYDATSEAPGPTEIRSQIVRAELLKAGVWLGLALAIGLCIILIQPILLIFAAIVLASMLDGGTRLLG
RVLPVARGWRLLIICLALLAFLAWTILFAGSQIVAQAAALQGVVMGQVERIAGWASDHGMGSFQLDTRTIADNIAGTVGR
VTAAVGTVLGALTSLVMIVVLGIFIAIEPRLYERGVAWMLPMNARENFYITTARMGFTLRRLMAGRLLGMFVEGIGTWLA
CLAVGIPMAALLGLLTGLLAFIPNIGAILSGVLLVLVGFSAGTDTGLWAIGIYLVVQTVDGYLIVPMVAKKTVDLAPALV
LGAQILFGALLGLMGLFLADPIVAMIKVALEREAERNAGAAEGKAAAS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=140, Percent_Identity=34.2857142857143, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38573; Mature: 38442

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETRKASGIRTSAAYDATSEAPGPTEIRSQIVRAELLKAGVWLGLALAIGLCIILIQPI
CCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIFAAIVLASMLDGGTRLLGRVLPVARGWRLLIICLALLAFLAWTILFAGSQIVAQAAA
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
LQGVVMGQVERIAGWASDHGMGSFQLDTRTIADNIAGTVGRVTAAVGTVLGALTSLVMIV
HHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGIFIAIEPRLYERGVAWMLPMNARENFYITTARMGFTLRRLMAGRLLGMFVEGIGTWL
HHHHHHHCCCHHHHCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACLAVGIPMAALLGLLTGLLAFIPNIGAILSGVLLVLVGFSAGTDTGLWAIGIYLVVQTV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
DGYLIVPMVAKKTVDLAPALVLGAQILFGALLGLMGLFLADPIVAMIKVALEREAERNAG
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AAEGKAAAS
CCCCCCCCC
>Mature Secondary Structure 
AETRKASGIRTSAAYDATSEAPGPTEIRSQIVRAELLKAGVWLGLALAIGLCIILIQPI
CCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIFAAIVLASMLDGGTRLLGRVLPVARGWRLLIICLALLAFLAWTILFAGSQIVAQAAA
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
LQGVVMGQVERIAGWASDHGMGSFQLDTRTIADNIAGTVGRVTAAVGTVLGALTSLVMIV
HHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGIFIAIEPRLYERGVAWMLPMNARENFYITTARMGFTLRRLMAGRLLGMFVEGIGTWL
HHHHHHHCCCHHHHCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACLAVGIPMAALLGLLTGLLAFIPNIGAILSGVLLVLVGFSAGTDTGLWAIGIYLVVQTV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
DGYLIVPMVAKKTVDLAPALVLGAQILFGALLGLMGLFLADPIVAMIKVALEREAERNAG
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AAEGKAAAS
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]