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The map label for this gene is ctaG [H]

Identifier: 103486888

GI number: 103486888

Start: 1456524

End: 1457084

Strand: Reverse

Name: ctaG [H]

Synonym: Sala_1402

Alternate gene names: 103486888

Gene position: 1457084-1456524 (Counterclockwise)

Preceding gene: 103486889

Following gene: 103486887

Centisome position: 43.56

GC content: 62.75

Gene sequence:

>561_bases
ATGATCCAGAGCCTGTCGCCCAAAGCCAGAACCGCCGGCCTTGCCGGCATCCTTGCGCTCGCCATGACGGGTCTCGGCTT
CGCGGCGGTGCCGCTCTACGATCTTTTCTGCCGCGTGACGGGGTTCGGCGGTACGACGCAGCGTTACGACGCCGCCGCTG
CCGCAGCCGAGCCCGAAATCCTCAGCCAGACGATATCGGTGCGTTTCGACGCCAATGTCTCGCCCAGGCTGCCATGGACA
TTCTATCCCGAGCATCCGACCGACACGGTCAGCATCGGCGCGCGCGACATGGCGATCTTCATCGCCGAAAATAATTCGGC
CGCGCCGGTCGTCGGCACTGCCAGCTTCAACGTCACGCCGACGCAGGCGGGTAAATATTTCACCAAGATCCAGTGCTTCT
GTTTCACCGAACAGCGGCTGGAACCGGGGCAACAGGTGCGGATGCCGGTGCTCTTCTTCGTCGACCCCGCGATCGTCGAC
GACCCCGACGCGCGCGACGTTCAGGAAATCACGCTCAGCTATACCTTCCACCCTGTAGACGAGGGCAAAAAGGCGAGCTA
A

Upstream 100 bases:

>100_bases
GGCGCCGCCAGCGCAGCCGCGCGAATATGATGGCGTGGATGCTCGGTGCGCTCGCGGTCCTGTTCTTCTTCATCACCATC
GCAAAGATGCAGATTTTCGC

Downstream 100 bases:

>100_bases
GGCCGCTCCGAGAGTCTAACGAGGACCGGCAGGCGGTGGGGAATCGCGATGCTGGGGCAGCAAAAACGGGAATTGTGACA
TGGCCGGTGCCAAACATCAT

Product: cytochrome C oxidase assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MIQSLSPKARTAGLAGILALAMTGLGFAAVPLYDLFCRVTGFGGTTQRYDAAAAAAEPEILSQTISVRFDANVSPRLPWT
FYPEHPTDTVSIGARDMAIFIAENNSAAPVVGTASFNVTPTQAGKYFTKIQCFCFTEQRLEPGQQVRMPVLFFVDPAIVD
DPDARDVQEITLSYTFHPVDEGKKAS

Sequences:

>Translated_186_residues
MIQSLSPKARTAGLAGILALAMTGLGFAAVPLYDLFCRVTGFGGTTQRYDAAAAAAEPEILSQTISVRFDANVSPRLPWT
FYPEHPTDTVSIGARDMAIFIAENNSAAPVVGTASFNVTPTQAGKYFTKIQCFCFTEQRLEPGQQVRMPVLFFVDPAIVD
DPDARDVQEITLSYTFHPVDEGKKAS
>Mature_186_residues
MIQSLSPKARTAGLAGILALAMTGLGFAAVPLYDLFCRVTGFGGTTQRYDAAAAAAEPEILSQTISVRFDANVSPRLPWT
FYPEHPTDTVSIGARDMAIFIAENNSAAPVVGTASFNVTPTQAGKYFTKIQCFCFTEQRLEPGQQVRMPVLFFVDPAIVD
DPDARDVQEITLSYTFHPVDEGKKAS

Specific function: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I [H]

COG id: COG3175

COG function: function code O; Cytochrome oxidase assembly factor

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX11/CtaG family [H]

Homologues:

Organism=Homo sapiens, GI4758034, Length=173, Percent_Identity=42.1965317919075, Blast_Score=144, Evalue=4e-35,
Organism=Homo sapiens, GI242247061, Length=120, Percent_Identity=36.6666666666667, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI242247057, Length=120, Percent_Identity=36.6666666666667, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71990692, Length=170, Percent_Identity=41.1764705882353, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6325125, Length=167, Percent_Identity=39.5209580838323, Blast_Score=132, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24581944, Length=175, Percent_Identity=42.8571428571429, Blast_Score=151, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007533 [H]

Pfam domain/function: PF04442 CtaG_Cox11 [H]

EC number: NA

Molecular weight: Translated: 20113; Mature: 20113

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQSLSPKARTAGLAGILALAMTGLGFAAVPLYDLFCRVTGFGGTTQRYDAAAAAAEPEI
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCHHH
LSQTISVRFDANVSPRLPWTFYPEHPTDTVSIGARDMAIFIAENNSAAPVVGTASFNVTP
HHEEEEEEECCCCCCCCCEEECCCCCCCEEEECCCEEEEEEECCCCCCCEEEECEECCCC
TQAGKYFTKIQCFCFTEQRLEPGQQVRMPVLFFVDPAIVDDPDARDVQEITLSYTFHPVD
CCCCCEEEEEEEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEECC
EGKKAS
CCCCCC
>Mature Secondary Structure
MIQSLSPKARTAGLAGILALAMTGLGFAAVPLYDLFCRVTGFGGTTQRYDAAAAAAEPEI
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCHHH
LSQTISVRFDANVSPRLPWTFYPEHPTDTVSIGARDMAIFIAENNSAAPVVGTASFNVTP
HHEEEEEEECCCCCCCCCEEECCCCCCCEEEECCCEEEEEEECCCCCCCEEEECEECCCC
TQAGKYFTKIQCFCFTEQRLEPGQQVRMPVLFFVDPAIVDDPDARDVQEITLSYTFHPVD
CCCCCEEEEEEEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEECC
EGKKAS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA