| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486854
Identifier: 103486854
GI number: 103486854
Start: 1424774
End: 1425076
Strand: Reverse
Name: 103486854
Synonym: Sala_1368
Alternate gene names: NA
Gene position: 1425076-1424774 (Counterclockwise)
Preceding gene: 103486855
Following gene: 103486853
Centisome position: 42.6
GC content: 59.08
Gene sequence:
>303_bases ATGAAGAGATCAAGCGTCTCGACCGGATTGCCCATGAACAGGGCAAAAGCCGGGCGGCCGTGCTGCGCGACGCCGTCGCG GCATATCAGGCGCAACCGGTGTCGAATGATGGCGATTGGATCGAACGCGGCTTCGGACTCTGGTCCCGAAACGGCATTTC TGTTGATCCGCATGATTATGATCGGAAGCGCCGGGCCGAATGGACGCGGCCCTGGGATGATGATTATGAGGAAGTGCGCG CAGAATCGCCCGACATGTTCGACGCCGAGGATGATCGCCAGCGGCAGATCTATCTCGATATGA
Upstream 100 bases:
>100_bases TCGCGATGATTTTTGTTGATCGCAACTTCGGGCGCGCTTGACGCGATATCATGATATGATATCAGTATATCAATGACCCG CATTCTTGCCGACCTGCCTG
Downstream 100 bases:
>100_bases TCGCCGGGAAATATCCCGAACCCAAAAGTCCGCACCCCAAGTGAGCGGTTATACGTTCGACGCAAATATCGTCATCGATG CCCTCGCCGGTTATCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MKRSSVSTGLPMNRAKAGRPCCATPSRHIRRNRCRMMAIGSNAASDSGPETAFLLIRMIMIGSAGPNGRGPGMMIMRKCA QNRPTCSTPRMIASGRSISI
Sequences:
>Translated_100_residues MKRSSVSTGLPMNRAKAGRPCCATPSRHIRRNRCRMMAIGSNAASDSGPETAFLLIRMIMIGSAGPNGRGPGMMIMRKCA QNRPTCSTPRMIASGRSISI >Mature_100_residues MKRSSVSTGLPMNRAKAGRPCCATPSRHIRRNRCRMMAIGSNAASDSGPETAFLLIRMIMIGSAGPNGRGPGMMIMRKCA QNRPTCSTPRMIASGRSISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10710; Mature: 10710
Theoretical pI: Translated: 12.38; Mature: 12.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 10.0 %Met (Translated Protein) 15.0 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 10.0 %Met (Mature Protein) 15.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSSVSTGLPMNRAKAGRPCCATPSRHIRRNRCRMMAIGSNAASDSGPETAFLLIRMIM CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHH IGSAGPNGRGPGMMIMRKCAQNRPTCSTPRMIASGRSISI HCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRSSVSTGLPMNRAKAGRPCCATPSRHIRRNRCRMMAIGSNAASDSGPETAFLLIRMIM CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHH IGSAGPNGRGPGMMIMRKCAQNRPTCSTPRMIASGRSISI HCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA