Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486853

Identifier: 103486853

GI number: 103486853

Start: 1424353

End: 1424733

Strand: Reverse

Name: 103486853

Synonym: Sala_1367

Alternate gene names: NA

Gene position: 1424733-1424353 (Counterclockwise)

Preceding gene: 103486854

Following gene: 103486852

Centisome position: 42.59

GC content: 61.42

Gene sequence:

>381_bases
GTGAGCGGTTATACGTTCGACGCAAATATCGTCATCGATGCCCTCGCCGGTTATCCGCCGGCGCGGGTCGAAATTCAGCG
CGCTGCGCGCAATGGCGCCCGCCCCTGGATCAGCCGCATCGCGTGGATCGAAGTGCTGTCAAAGGGCGACGATCGCGTTG
TCAGCGAGGCGATGGCGTTTCTGGCGCATTTCGGCCTGGATGAAATCGACGACGAAATCTCCTCGCGAGCAGCGGCGCTG
CGCCGCGACCGACCGCGGTTGAAGTCGCCCGACGCAATTATACTGGCAACGGCCCAGACGCGCGGACGCGTTCTCATCAC
CCGTAATATCAAGGATTTTCCGGCGAATATGCCGGGCATCCGTGTCCCCTATACGCTCTAA

Upstream 100 bases:

>100_bases
AATCGCCCGACATGTTCGACGCCGAGGATGATCGCCAGCGGCAGATCTATCTCGATATGATCGCCGGGAAATATCCCGAA
CCCAAAAGTCCGCACCCCAA

Downstream 100 bases:

>100_bases
GACGAAAGCCAGACCCACATGTGCGGAATTATCGGAATCATCGGCAAGGATCAGGTCGCCGAGCGCCTCGTCGACGGCCT
CAGGCGCATGGAATATCGCG

Product: PilT protein-like protein

Products: NA

Alternate protein names: PilT Domain-Containing Protein; PilT Protein-Like; PilT Protein-Like Protein; PIN Domain Protein

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSGYTFDANIVIDALAGYPPARVEIQRAARNGARPWISRIAWIEVLSKGDDRVVSEAMAFLAHFGLDEIDDEISSRAAAL
RRDRPRLKSPDAIILATAQTRGRVLITRNIKDFPANMPGIRVPYTL

Sequences:

>Translated_126_residues
MSGYTFDANIVIDALAGYPPARVEIQRAARNGARPWISRIAWIEVLSKGDDRVVSEAMAFLAHFGLDEIDDEISSRAAAL
RRDRPRLKSPDAIILATAQTRGRVLITRNIKDFPANMPGIRVPYTL
>Mature_125_residues
SGYTFDANIVIDALAGYPPARVEIQRAARNGARPWISRIAWIEVLSKGDDRVVSEAMAFLAHFGLDEIDDEISSRAAALR
RDRPRLKSPDAIILATAQTRGRVLITRNIKDFPANMPGIRVPYTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13990; Mature: 13859

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYTFDANIVIDALAGYPPARVEIQRAARNGARPWISRIAWIEVLSKGDDRVVSEAMAF
CCCCCCCHHHEEEHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
LAHFGLDEIDDEISSRAAALRRDRPRLKSPDAIILATAQTRGRVLITRNIKDFPANMPGI
HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCE
RVPYTL
ECCCCC
>Mature Secondary Structure 
SGYTFDANIVIDALAGYPPARVEIQRAARNGARPWISRIAWIEVLSKGDDRVVSEAMAF
CCCCCCHHHEEEHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
LAHFGLDEIDDEISSRAAALRRDRPRLKSPDAIILATAQTRGRVLITRNIKDFPANMPGI
HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCE
RVPYTL
ECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA